RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 BEND5Q7L4P6 421 aa16.24■□□□□ 0.19
LMNA-223ENST00000515459 PPM1KQ8N3J5 372 aa16.24■□□□□ 0.19
LMNA-223ENST00000515459 FRS2Q8WU20 508 aa16.24■□□□□ 0.19
LMNA-223ENST00000515459 OR8D1Q8WZ84 308 aa16.24■□□□□ 0.19
LMNA-223ENST00000515459 BTN2A3PQ96KV6 586 aa16.24■□□□□ 0.19
LMNA-223ENST00000515459 LGMNQ99538 433 aa16.24■□□□□ 0.19
LMNA-223ENST00000515459 TRIM62Q9BVG3 475 aa16.24■□□□□ 0.19
LMNA-223ENST00000515459 GOLPH3LQ9H4A5 285 aa16.24■□□□□ 0.19
LMNA-223ENST00000515459 ST7Q9NRC1 585 aa16.24■□□□□ 0.19
LMNA-223ENST00000515459 RMND1Q9NWS8 449 aa16.24■□□□□ 0.19
LMNA-223ENST00000515459 ASH1LQ9NR48 2969 aaKnown RBP16.23■□□□□ 0.19
LMNA-223ENST00000515459 CAPN8A6NHC0 703 aa16.23■□□□□ 0.19
LMNA-223ENST00000515459 F5H5T6 163 aa16.23■□□□□ 0.19
LMNA-223ENST00000515459 KALRNO60229 2985 aa16.23■□□□□ 0.19
LMNA-223ENST00000515459 MT-CO3P00414 261 aa16.23■□□□□ 0.19
LMNA-223ENST00000515459 CALCAP01258 141 aa16.23■□□□□ 0.19
LMNA-223ENST00000515459 PDGFRAP16234 1089 aa16.23■□□□□ 0.19
LMNA-223ENST00000515459 RPL34P49207 117 aaKnown RBP16.23■□□□□ 0.19
LMNA-223ENST00000515459 NUMBP49757 651 aa16.23■□□□□ 0.19
LMNA-223ENST00000515459 PLK1P53350 603 aa16.23■□□□□ 0.19
LMNA-223ENST00000515459 DAB2P98082 770 aa16.23■□□□□ 0.19
LMNA-223ENST00000515459 CFHR1Q03591 330 aa16.23■□□□□ 0.19
LMNA-223ENST00000515459 ZC3H12AQ5D1E8 599 aaKnown RBP16.23■□□□□ 0.19
LMNA-223ENST00000515459 ANKRD40Q6AI12 368 aa16.23■□□□□ 0.19
LMNA-223ENST00000515459 CCAR2Q8N163 923 aaKnown RBP16.23■□□□□ 0.19
LMNA-223ENST00000515459 SLC25A45Q8N413 288 aa16.23■□□□□ 0.19
LMNA-223ENST00000515459 ZNF248Q8NDW4 579 aa16.23■□□□□ 0.19
LMNA-223ENST00000515459 KLHDC7BQ96G42 594 aa16.23■□□□□ 0.19
LMNA-223ENST00000515459 SARDHQ9UL12 918 aa16.23■□□□□ 0.19
LMNA-223ENST00000515459 A0A1B0GVM2 712 aa16.22■□□□□ 0.19
LMNA-223ENST00000515459 TCAF2A6NFQ2 919 aa16.22■□□□□ 0.19
LMNA-223ENST00000515459 KCNU1A8MYU2 1149 aa16.22■□□□□ 0.19
LMNA-223ENST00000515459 C1QTNF3-AMACRE9PGA6 284 aa16.22■□□□□ 0.19
LMNA-223ENST00000515459 ERVH48-1M5A8F1 160 aa16.22■□□□□ 0.19
LMNA-223ENST00000515459 RNGTTO60942 597 aaKnown RBP16.22■□□□□ 0.19
LMNA-223ENST00000515459 TRUB2O95900 331 aaKnown RBP16.22■□□□□ 0.19
LMNA-223ENST00000515459 GPD2P43304 727 aa16.22■□□□□ 0.19
LMNA-223ENST00000515459 ACADSBP45954 432 aa16.22■□□□□ 0.19
LMNA-223ENST00000515459 VASPP50552 380 aaPredicted RBP16.22■□□□□ 0.19
LMNA-223ENST00000515459 PMS1P54277 932 aaKnown RBP16.22■□□□□ 0.19
LMNA-223ENST00000515459 OXCT1P55809 520 aa16.22■□□□□ 0.19
LMNA-223ENST00000515459 PCBP4P57723 403 aaKnown RBP16.22■□□□□ 0.19
LMNA-223ENST00000515459 LRRC63Q05C16 580 aa16.22■□□□□ 0.19
LMNA-223ENST00000515459 KCNH2Q12809 1159 aa16.22■□□□□ 0.19
LMNA-223ENST00000515459 CNTN1Q12860 1018 aa16.22■□□□□ 0.19
LMNA-223ENST00000515459 ACCSLQ4AC99 568 aa16.22■□□□□ 0.19
LMNA-223ENST00000515459 COBLL1Q53SF7 1204 aa16.22■□□□□ 0.19
LMNA-223ENST00000515459 ZNF658Q5TYW1 1059 aaPredicted RBP16.22■□□□□ 0.19
LMNA-223ENST00000515459 TTC39BQ5VTQ0 682 aaPredicted RBP16.22■□□□□ 0.19
LMNA-223ENST00000515459 AGBL4Q5VU57 503 aa16.22■□□□□ 0.19
LMNA-223ENST00000515459 PCSK4Q6UW60 755 aa16.22■□□□□ 0.19
LMNA-223ENST00000515459 ATP6V0D2Q8N8Y2 350 aa16.22■□□□□ 0.19
LMNA-223ENST00000515459 KAT5Q92993 513 aa16.22■□□□□ 0.19
LMNA-223ENST00000515459 PPP1R9BQ96SB3 815 aa16.22■□□□□ 0.19
LMNA-223ENST00000515459 METTL14Q9HCE5 456 aaKnown RBP16.22■□□□□ 0.19
LMNA-223ENST00000515459 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.22■□□□□ 0.19
LMNA-223ENST00000515459 SLC12A6Q9UHW9 1150 aa16.22■□□□□ 0.19
LMNA-223ENST00000515459 SLC25A13Q9UJS0 675 aa16.22■□□□□ 0.19
LMNA-223ENST00000515459 PPM1HQ9ULR3 514 aa16.22■□□□□ 0.19
LMNA-223ENST00000515459 PCDHB1Q9Y5F3 818 aa16.22■□□□□ 0.19
LMNA-223ENST00000515459 TRIM49BA6NDI0 452 aa16.21■□□□□ 0.19
LMNA-223ENST00000515459 ALOX15BO15296 676 aa16.21■□□□□ 0.19
LMNA-223ENST00000515459 PMM2O15305 246 aa16.21■□□□□ 0.19
LMNA-223ENST00000515459 ZNF18P17022 549 aa16.21■□□□□ 0.19
LMNA-223ENST00000515459 DGKAP23743 735 aa16.21■□□□□ 0.19
LMNA-223ENST00000515459 YWHAZP63104 245 aaKnown RBP16.21■□□□□ 0.19
LMNA-223ENST00000515459 CETN1Q12798 172 aa16.21■□□□□ 0.19
LMNA-223ENST00000515459 PNOCQ13519 176 aa16.21■□□□□ 0.19
LMNA-223ENST00000515459 POM121L1PQ3SYA9 428 aa16.21■□□□□ 0.19
LMNA-223ENST00000515459 TAF1BQ53T94 588 aaPredicted RBP16.21■□□□□ 0.19
LMNA-223ENST00000515459 RABGAP1LQ5R372 815 aa16.21■□□□□ 0.19
LMNA-223ENST00000515459 CIR1Q86X95 450 aaPredicted RBP16.21■□□□□ 0.19
LMNA-223ENST00000515459 LSMEM2Q8N112 164 aa16.21■□□□□ 0.19
LMNA-223ENST00000515459 OR4C6Q8NH72 309 aa16.21■□□□□ 0.19
LMNA-223ENST00000515459 ERCC4Q92889 916 aaPredicted RBP16.21■□□□□ 0.19
LMNA-223ENST00000515459 ZNF578Q96N58 590 aaPredicted RBP16.21■□□□□ 0.19
LMNA-223ENST00000515459 PRMT1Q99873 361 aaKnown RBP16.21■□□□□ 0.19
LMNA-223ENST00000515459 SCAND2PQ9GZW5 306 aaPredicted RBP16.21■□□□□ 0.19
LMNA-223ENST00000515459 POPDC2Q9HBU9 364 aa16.21■□□□□ 0.19
LMNA-223ENST00000515459 PREBQ9HCU5 417 aa16.21■□□□□ 0.19
LMNA-223ENST00000515459 CA5BQ9Y2D0 317 aa16.21■□□□□ 0.19
LMNA-223ENST00000515459 TDRD6O60522 2096 aaKnown RBP16.21■□□□□ 0.19
LMNA-223ENST00000515459 MCF2LO15068 1137 aa16.2■□□□□ 0.18
LMNA-223ENST00000515459 ATP9BO43861 1147 aa16.2■□□□□ 0.18
LMNA-223ENST00000515459 IGLV3-25P01717 112 aa16.2■□□□□ 0.18
LMNA-223ENST00000515459 THEGLP0DJG4 465 aa16.2■□□□□ 0.18
LMNA-223ENST00000515459 UCNP55089 124 aa16.2■□□□□ 0.18
LMNA-223ENST00000515459 TMPRSS3P57727 454 aa16.2■□□□□ 0.18
LMNA-223ENST00000515459 BROXQ5VW32 411 aa16.2■□□□□ 0.18
LMNA-223ENST00000515459 CXorf57Q6NSI4 855 aaKnown RBP16.2■□□□□ 0.18
LMNA-223ENST00000515459 RRAGAQ7L523 313 aa16.2■□□□□ 0.18
LMNA-223ENST00000515459 TMEM145Q8NBT3 493 aa16.2■□□□□ 0.18
LMNA-223ENST00000515459 LMO3Q8TAP4 145 aa16.2■□□□□ 0.18
LMNA-223ENST00000515459 STK32AQ8WU08 396 aa16.2■□□□□ 0.18
LMNA-223ENST00000515459 NAF1Q96HR8 494 aaKnown RBP16.2■□□□□ 0.18
LMNA-223ENST00000515459 GSDMAQ96QA5 445 aa16.2■□□□□ 0.18
LMNA-223ENST00000515459 SLC4A5Q9BY07 1137 aa16.2■□□□□ 0.18
LMNA-223ENST00000515459 KLHL11Q9NVR0 708 aa16.2■□□□□ 0.18
LMNA-223ENST00000515459 SLC31A1O15431 190 aa16.19■□□□□ 0.18
LMNA-223ENST00000515459 FFAR2O15552 330 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms