RNA–Protein interactions for RNA: ENST00000514402.1

MATR3-223, Transcript of matrin 3, human

TSL 2

Gene MATR3, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-223	ENST00000514402	FRG2B	Q96QU4	278 aa		4.58	□□□□□ -1.68
MATR3-223	ENST00000514402	NTPCR	Q9BSD7	190 aa	Known RBP	4.58	□□□□□ -1.68
MATR3-223	ENST00000514402	CRB3	Q9BUF7	120 aa		4.58	□□□□□ -1.68
MATR3-223	ENST00000514402	DDX23	Q9BUQ8	820 aa	Known RBP	4.58	□□□□□ -1.68
MATR3-223	ENST00000514402	ARHGAP39	Q9C0H5	1083 aa		4.58	□□□□□ -1.68
MATR3-223	ENST00000514402	ISCU	Q9H1K1	167 aa		4.58	□□□□□ -1.68
MATR3-223	ENST00000514402	ACTR5	Q9H9F9	607 aa	Predicted RBP	4.58	□□□□□ -1.68
MATR3-223	ENST00000514402	ARL15	Q9NXU5	204 aa		4.58	□□□□□ -1.68
MATR3-223	ENST00000514402	WWOX	Q9NZC7	414 aa		4.58	□□□□□ -1.68
MATR3-223	ENST00000514402	WNT16	Q9UBV4	365 aa		4.58	□□□□□ -1.68
MATR3-223	ENST00000514402	PCDHA10	Q9Y5I2	948 aa		4.58	□□□□□ -1.68
MATR3-223	ENST00000514402	TRBV5-7	A0A0A0MS05	114 aa		4.57	□□□□□ -1.68
MATR3-223	ENST00000514402	CCDC194	A0A1B0GVG4	234 aa		4.57	□□□□□ -1.68
MATR3-223	ENST00000514402	AGAP5	A6NIR3	686 aa		4.57	□□□□□ -1.68
MATR3-223	ENST00000514402	TNFRSF13B	O14836	293 aa	Predicted RBP	4.57	□□□□□ -1.68
MATR3-223	ENST00000514402	CCNT1	O60563	726 aa	Known RBP	4.57	□□□□□ -1.68
MATR3-223	ENST00000514402	MYZAP	P0CAP1	466 aa		4.57	□□□□□ -1.68
MATR3-223	ENST00000514402	PEPD	P12955	493 aa		4.57	□□□□□ -1.68
MATR3-223	ENST00000514402	GYS1	P13807	737 aa		4.57	□□□□□ -1.68
MATR3-223	ENST00000514402	PKM	P14618	531 aa	Known RBP	4.57	□□□□□ -1.68
MATR3-223	ENST00000514402	ARSB	P15848	533 aa		4.57	□□□□□ -1.68
MATR3-223	ENST00000514402	ARRB2	P32121	409 aa		4.57	□□□□□ -1.68
MATR3-223	ENST00000514402	EGR4	Q05215	589 aa		4.57	□□□□□ -1.68
MATR3-223	ENST00000514402	CDK18	Q07002	472 aa		4.57	□□□□□ -1.68
MATR3-223	ENST00000514402	KRT72	Q14CN4	511 aa		4.57	□□□□□ -1.68
MATR3-223	ENST00000514402	GALNTL6	Q49A17	601 aa		4.57	□□□□□ -1.68
MATR3-223	ENST00000514402	C5orf22	Q49AR2	442 aa		4.57	□□□□□ -1.68
MATR3-223	ENST00000514402	WASHC2D	Q5SRD0	308 aa		4.57	□□□□□ -1.68
MATR3-223	ENST00000514402	UBAP2	Q5T6F2	1119 aa	Known RBP	4.57	□□□□□ -1.68
MATR3-223	ENST00000514402	HMBOX1	Q6NT76	420 aa		4.57	□□□□□ -1.68
MATR3-223	ENST00000514402	SLC30A9	Q6PML9	568 aa		4.57	□□□□□ -1.68
MATR3-223	ENST00000514402	GPSM1	Q86YR5	675 aa		4.57	□□□□□ -1.68
MATR3-223	ENST00000514402	FBXL14	Q8N1E6	418 aa		4.57	□□□□□ -1.68
MATR3-223	ENST00000514402	DPP10	Q8N608	796 aa		4.57	□□□□□ -1.68
MATR3-223	ENST00000514402	ATG16L2	Q8NAA4	619 aa		4.57	□□□□□ -1.68
MATR3-223	ENST00000514402	KDM1B	Q8NB78	822 aa		4.57	□□□□□ -1.68
MATR3-223	ENST00000514402	C7orf57	Q8NEG2	295 aa		4.57	□□□□□ -1.68
MATR3-223	ENST00000514402	SCAMP5	Q8TAC9	235 aa		4.57	□□□□□ -1.68
MATR3-223	ENST00000514402	GABPB2	Q8TAK5	448 aa	Predicted RBP	4.57	□□□□□ -1.68
MATR3-223	ENST00000514402	FAM110D	Q8TAY7	271 aa	Predicted RBP	4.57	□□□□□ -1.68
MATR3-223	ENST00000514402	STT3B	Q8TCJ2	826 aa		4.57	□□□□□ -1.68
MATR3-223	ENST00000514402	OTUD7A	Q8TE49	926 aa	Predicted RBP	4.57	□□□□□ -1.68
MATR3-223	ENST00000514402	ZNF304	Q9HCX3	659 aa		4.57	□□□□□ -1.68
MATR3-223	ENST00000514402	SLC25A13	Q9UJS0	675 aa		4.57	□□□□□ -1.68
MATR3-223	ENST00000514402	EME2	A4GXA9	379 aa	Predicted RBP	4.56	□□□□□ -1.68
MATR3-223	ENST00000514402	GRM8	O00222	908 aa		4.56	□□□□□ -1.68
MATR3-223	ENST00000514402	PRPH2	P23942	346 aa		4.56	□□□□□ -1.68
MATR3-223	ENST00000514402	MLH1	P40692	756 aa		4.56	□□□□□ -1.68
MATR3-223	ENST00000514402	ENTPD1	P49961	510 aa		4.56	□□□□□ -1.68
MATR3-223	ENST00000514402	CYP2J2	P51589	502 aa		4.56	□□□□□ -1.68
MATR3-223	ENST00000514402	PNLIPRP1	P54315	467 aa		4.56	□□□□□ -1.68
MATR3-223	ENST00000514402	ZXDB	P98169	803 aa		4.56	□□□□□ -1.68
MATR3-223	ENST00000514402	ZBTB16	Q05516	673 aa		4.56	□□□□□ -1.68
MATR3-223	ENST00000514402	ALKBH1	Q13686	389 aa	Known RBP	4.56	□□□□□ -1.68
MATR3-223	ENST00000514402	ODF3L2	Q3SX64	289 aa		4.56	□□□□□ -1.68
MATR3-223	ENST00000514402	ARL13A	Q5H913	290 aa	Predicted RBP	4.56	□□□□□ -1.68
MATR3-223	ENST00000514402	FAM171A1	Q5VUB5	890 aa		4.56	□□□□□ -1.68
MATR3-223	ENST00000514402	LIN54	Q6MZP7	749 aa		4.56	□□□□□ -1.68
MATR3-223	ENST00000514402	AADACL2	Q6P093	401 aa		4.56	□□□□□ -1.68
MATR3-223	ENST00000514402	GGT6	Q6P531	493 aa		4.56	□□□□□ -1.68
MATR3-223	ENST00000514402	C1orf228	Q6PIY5	440 aa		4.56	□□□□□ -1.68
MATR3-223	ENST00000514402	CCDC25	Q86WR0	208 aa		4.56	□□□□□ -1.68
MATR3-223	ENST00000514402	CACNA2D3	Q8IZS8	1091 aa		4.56	□□□□□ -1.68
MATR3-223	ENST00000514402	IQCF1	Q8N6M8	205 aa		4.56	□□□□□ -1.68
MATR3-223	ENST00000514402	ASB5	Q8WWX0	329 aa		4.56	□□□□□ -1.68
MATR3-223	ENST00000514402	LTV1	Q96GA3	475 aa	Predicted RBP	4.56	□□□□□ -1.68
MATR3-223	ENST00000514402	ZNF419	Q96HQ0	510 aa	Predicted RBP	4.56	□□□□□ -1.68
MATR3-223	ENST00000514402	ZNF333	Q96JL9	665 aa		4.56	□□□□□ -1.68
MATR3-223	ENST00000514402	MEIS3	Q99687	375 aa		4.56	□□□□□ -1.68
MATR3-223	ENST00000514402	ZPBP	Q9BS86	351 aa		4.56	□□□□□ -1.68
MATR3-223	ENST00000514402	FRMD8	Q9BZ67	464 aa	Predicted RBP	4.56	□□□□□ -1.68
MATR3-223	ENST00000514402	MYLK2	Q9H1R3	596 aa		4.56	□□□□□ -1.68
MATR3-223	ENST00000514402	ABHD16B	Q9H3Z7	469 aa		4.56	□□□□□ -1.68
MATR3-223	ENST00000514402	PLAC1	Q9HBJ0	212 aa		4.56	□□□□□ -1.68
MATR3-223	ENST00000514402	LRFN1	Q9P244	771 aa		4.56	□□□□□ -1.68
MATR3-223	ENST00000514402	FBXO4	Q9UKT5	387 aa		4.56	□□□□□ -1.68
MATR3-223	ENST00000514402	SEPT4	O43236	478 aa		4.55	□□□□□ -1.68
MATR3-223	ENST00000514402	TFRC	P02786	760 aa	Known RBP	4.55	□□□□□ -1.68
MATR3-223	ENST00000514402	NGFR	P08138	427 aa		4.55	□□□□□ -1.68
MATR3-223	ENST00000514402	HOXC6	P09630	235 aa		4.55	□□□□□ -1.68
MATR3-223	ENST00000514402	PRKCH	P24723	683 aa		4.55	□□□□□ -1.68
MATR3-223	ENST00000514402	GSTM2	P28161	218 aa		4.55	□□□□□ -1.68
MATR3-223	ENST00000514402	GXYLT1	Q4G148	440 aa		4.55	□□□□□ -1.68
MATR3-223	ENST00000514402	OTUD1	Q5VV17	481 aa	Predicted RBP	4.55	□□□□□ -1.68
MATR3-223	ENST00000514402	SLC16A12	Q6ZSM3	486 aa		4.55	□□□□□ -1.68
MATR3-223	ENST00000514402	GALNT7	Q86SF2	657 aa		4.55	□□□□□ -1.68
MATR3-223	ENST00000514402	FAM217A	Q8IXS0	508 aa		4.55	□□□□□ -1.68
MATR3-223	ENST00000514402	OR6Y1	Q8NGX8	325 aa		4.55	□□□□□ -1.68
MATR3-223	ENST00000514402	ADAMTS15	Q8TE58	950 aa		4.55	□□□□□ -1.68
MATR3-223	ENST00000514402	MIB2	Q96AX9	1013 aa		4.55	□□□□□ -1.68
MATR3-223	ENST00000514402	ARRDC3	Q96B67	414 aa		4.55	□□□□□ -1.68
MATR3-223	ENST00000514402	C3orf49	Q96BT1	292 aa		4.55	□□□□□ -1.68
MATR3-223	ENST00000514402	SDCCAG3	Q96C92	435 aa		4.55	□□□□□ -1.68
MATR3-223	ENST00000514402	SLC39A13	Q96H72	371 aa		4.55	□□□□□ -1.68
MATR3-223	ENST00000514402	URB1-AS1	Q96HZ7	61 aa		4.55	□□□□□ -1.68
MATR3-223	ENST00000514402	ZNF479	Q96JC4	524 aa		4.55	□□□□□ -1.68
MATR3-223	ENST00000514402	WDR77	Q9BQA1	342 aa	Predicted RBP	4.55	□□□□□ -1.68
MATR3-223	ENST00000514402	B3GNT4	Q9C0J1	378 aa		4.55	□□□□□ -1.68
MATR3-223	ENST00000514402	HIPK3	Q9H422	1215 aa		4.55	□□□□□ -1.68
MATR3-223	ENST00000514402		Q9N2J8	555 aa		4.55	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms