RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 ZYG11BQ9C0D3 744 aa15.28■□□□□ 0.04
VCAN-211ENST00000513984 NOL6Q9H6R4 1146 aaKnown RBP15.28■□□□□ 0.04
VCAN-211ENST00000513984 CCSER2Q9H7U1 834 aa15.28■□□□□ 0.04
VCAN-211ENST00000513984 DENND4CQ5VZ89 1909 aa15.27■□□□□ 0.04
VCAN-211ENST00000513984 ATXN2Q99700 1313 aaKnown RBP15.27■□□□□ 0.04
VCAN-211ENST00000513984 PSMD3O43242 534 aa15.27■□□□□ 0.04
VCAN-211ENST00000513984 EFCAB14O75071 495 aa15.27■□□□□ 0.04
VCAN-211ENST00000513984 ZWINTO95229 277 aa15.27■□□□□ 0.04
VCAN-211ENST00000513984 TIMP1P01033 207 aa15.27■□□□□ 0.04
VCAN-211ENST00000513984 MT-ND3P03897 115 aa15.27■□□□□ 0.04
VCAN-211ENST00000513984 CSH1P0DML2 217 aa15.27■□□□□ 0.04
VCAN-211ENST00000513984 CSH2P0DML3 217 aa15.27■□□□□ 0.04
VCAN-211ENST00000513984 GBP2P32456 591 aaPredicted RBP15.27■□□□□ 0.04
VCAN-211ENST00000513984 RPA3P35244 121 aaPredicted RBP15.27■□□□□ 0.04
VCAN-211ENST00000513984 NDST2P52849 883 aa15.27■□□□□ 0.04
VCAN-211ENST00000513984 DEFB103AP81534 67 aa15.27■□□□□ 0.04
VCAN-211ENST00000513984 IL9RQ01113 521 aa15.27■□□□□ 0.04
VCAN-211ENST00000513984 PRPSAP1Q14558 356 aa15.27■□□□□ 0.04
VCAN-211ENST00000513984 CRYMQ14894 314 aa15.27■□□□□ 0.04
VCAN-211ENST00000513984 SPOUT1Q5T280 376 aaKnown RBP15.27■□□□□ 0.04
VCAN-211ENST00000513984 GKAP1Q5VSY0 366 aaPredicted RBP15.27■□□□□ 0.04
VCAN-211ENST00000513984 TPGS2Q68CL5 300 aa15.27■□□□□ 0.04
VCAN-211ENST00000513984 SH2D5Q6ZV89 423 aa15.27■□□□□ 0.04
VCAN-211ENST00000513984 TAX1BP1Q86VP1 789 aa15.27■□□□□ 0.04
VCAN-211ENST00000513984 CMTR2Q8IYT2 770 aaKnown RBP15.27■□□□□ 0.04
VCAN-211ENST00000513984 BANPQ8N9N5 519 aa15.27■□□□□ 0.04
VCAN-211ENST00000513984 PDZD8Q8NEN9 1154 aa15.27■□□□□ 0.04
VCAN-211ENST00000513984 ZNF461Q8TAF7 563 aa15.27■□□□□ 0.04
VCAN-211ENST00000513984 FATE1Q969F0 183 aa15.27■□□□□ 0.04
VCAN-211ENST00000513984 TMEM169Q96HH4 297 aa15.27■□□□□ 0.04
VCAN-211ENST00000513984 NSRP1Q9H0G5 558 aaKnown RBP15.27■□□□□ 0.04
VCAN-211ENST00000513984 LRRC40Q9H9A6 602 aa15.27■□□□□ 0.04
VCAN-211ENST00000513984 PIH1D1Q9NWS0 290 aaKnown RBP15.27■□□□□ 0.04
VCAN-211ENST00000513984 MAGED2Q9UNF1 606 aaPredicted RBP15.27■□□□□ 0.04
VCAN-211ENST00000513984 HBS1LQ9Y450 684 aaKnown RBP15.27■□□□□ 0.04
VCAN-211ENST00000513984 CARNS1A5YM72 827 aa15.27■□□□□ 0.03
VCAN-211ENST00000513984 DRGXA6NNA5 263 aa15.27■□□□□ 0.03
VCAN-211ENST00000513984 C2CD2LO14523 706 aa15.27■□□□□ 0.03
VCAN-211ENST00000513984 KRT37O76014 449 aa15.27■□□□□ 0.03
VCAN-211ENST00000513984 SEC24AO95486 1093 aa15.27■□□□□ 0.03
VCAN-211ENST00000513984 VIMP08670 466 aaKnown RBP15.27■□□□□ 0.03
VCAN-211ENST00000513984 SNRPAP09012 282 aaKnown RBP15.27■□□□□ 0.03
VCAN-211ENST00000513984 LAG3P18627 525 aa15.27■□□□□ 0.03
VCAN-211ENST00000513984 ITGB8P26012 769 aa15.27■□□□□ 0.03
VCAN-211ENST00000513984 PAPOLAP51003 745 aaKnown RBP15.27■□□□□ 0.03
VCAN-211ENST00000513984 WDR5P61964 334 aaKnown RBP15.27■□□□□ 0.03
VCAN-211ENST00000513984 SLC18A2Q05940 514 aa15.27■□□□□ 0.03
VCAN-211ENST00000513984 NIPAL4Q0D2K0 466 aa15.27■□□□□ 0.03
VCAN-211ENST00000513984 NAB1Q13506 487 aa15.27■□□□□ 0.03
VCAN-211ENST00000513984 OLIG2Q13516 323 aa15.27■□□□□ 0.03
VCAN-211ENST00000513984 ZNF449Q6P9G9 518 aa15.27■□□□□ 0.03
VCAN-211ENST00000513984 MARK2Q7KZI7 788 aaKnown RBP15.27■□□□□ 0.03
VCAN-211ENST00000513984 ZNF419Q96HQ0 510 aaPredicted RBP15.27■□□□□ 0.03
VCAN-211ENST00000513984 PAWRQ96IZ0 340 aaKnown RBP15.27■□□□□ 0.03
VCAN-211ENST00000513984 SEC16BQ96JE7 1060 aa15.27■□□□□ 0.03
VCAN-211ENST00000513984 FCRL5Q96RD9 977 aa15.27■□□□□ 0.03
VCAN-211ENST00000513984 BFARQ9NZS9 450 aa15.27■□□□□ 0.03
VCAN-211ENST00000513984 TRIM43BA6NCK2 446 aa15.26■□□□□ 0.03
VCAN-211ENST00000513984 TCP11X1B4DZS4 312 aa15.26■□□□□ 0.03
VCAN-211ENST00000513984 AP3B1O00203 1094 aa15.26■□□□□ 0.03
VCAN-211ENST00000513984 KIAA0355O15063 1070 aa15.26■□□□□ 0.03
VCAN-211ENST00000513984 TM9SF1O15321 606 aa15.26■□□□□ 0.03
VCAN-211ENST00000513984 SERPINB9P50453 376 aa15.26■□□□□ 0.03
VCAN-211ENST00000513984 SLC1A5Q15758 541 aa15.26■□□□□ 0.03
VCAN-211ENST00000513984 ALFQ53S48 1182 aa15.26■□□□□ 0.03
VCAN-211ENST00000513984 SPANXN3Q5MJ09 141 aa15.26■□□□□ 0.03
VCAN-211ENST00000513984 LGSNQ5TDP6 509 aa15.26■□□□□ 0.03
VCAN-211ENST00000513984 RAP1GAP2Q684P5 730 aa15.26■□□□□ 0.03
VCAN-211ENST00000513984 NAPEPLDQ6IQ20 393 aa15.26■□□□□ 0.03
VCAN-211ENST00000513984 FBXL22Q6P050 247 aa15.26■□□□□ 0.03
VCAN-211ENST00000513984 KLHDC10Q6PID8 442 aa15.26■□□□□ 0.03
VCAN-211ENST00000513984 MICALCLQ6ZW33 695 aa15.26■□□□□ 0.03
VCAN-211ENST00000513984 PIGWQ7Z7B1 504 aa15.26■□□□□ 0.03
VCAN-211ENST00000513984 CACNA2D3Q8IZS8 1091 aa15.26■□□□□ 0.03
VCAN-211ENST00000513984 USP33Q8TEY7 942 aa15.26■□□□□ 0.03
VCAN-211ENST00000513984 TRIM43Q96BQ3 446 aaPredicted RBP15.26■□□□□ 0.03
VCAN-211ENST00000513984 MTBPQ96DY7 904 aa15.26■□□□□ 0.03
VCAN-211ENST00000513984 SERAC1Q96JX3 654 aa15.26■□□□□ 0.03
VCAN-211ENST00000513984 PPP1R2P1Q96PQ5 205 aa15.26■□□□□ 0.03
VCAN-211ENST00000513984 TGS1Q96RS0 853 aaKnown RBP15.26■□□□□ 0.03
VCAN-211ENST00000513984 GLOD4Q9HC38 313 aa15.26■□□□□ 0.03
VCAN-211ENST00000513984 SAMD15Q9P1V8 674 aa15.26■□□□□ 0.03
VCAN-211ENST00000513984 ZNF212Q9UDV6 495 aa15.26■□□□□ 0.03
VCAN-211ENST00000513984 AAR2Q9Y312 384 aaKnown RBP15.26■□□□□ 0.03
VCAN-211ENST00000513984 MRPL42Q9Y6G3 142 aaKnown RBP15.26■□□□□ 0.03
VCAN-211ENST00000513984 TRIM49D1C9J1S8 452 aa15.25■□□□□ 0.03
VCAN-211ENST00000513984 UGT1A9O60656 530 aa15.25■□□□□ 0.03
VCAN-211ENST00000513984 USP12O75317 370 aa15.25■□□□□ 0.03
VCAN-211ENST00000513984 KRT38O76015 456 aa15.25■□□□□ 0.03
VCAN-211ENST00000513984 CNTN5O94779 1100 aa15.25■□□□□ 0.03
VCAN-211ENST00000513984 POLBP06746 335 aa15.25■□□□□ 0.03
VCAN-211ENST00000513984 HMBSP08397 361 aa15.25■□□□□ 0.03
VCAN-211ENST00000513984 CSF2RAP15509 400 aa15.25■□□□□ 0.03
VCAN-211ENST00000513984 HMGA1P17096 107 aaKnown RBP15.25■□□□□ 0.03
VCAN-211ENST00000513984 DNAJB2P25686 324 aa15.25■□□□□ 0.03
VCAN-211ENST00000513984 NPY2RP49146 381 aa15.25■□□□□ 0.03
VCAN-211ENST00000513984 BTG3Q14201 252 aaPredicted RBP15.25■□□□□ 0.03
VCAN-211ENST00000513984 FRG1Q14331 258 aaKnown RBP15.25■□□□□ 0.03
VCAN-211ENST00000513984 ANO4Q32M45 955 aa15.25■□□□□ 0.03
VCAN-211ENST00000513984 C6orf89Q6UWU4 347 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms