RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 PIK3R1P27986 724 aa9.84□□□□□ -0.83
VCAN-210ENST00000513960 PDAP1Q13442 181 aaKnown RBP9.84□□□□□ -0.83
VCAN-210ENST00000513960 LAMC2Q13753 1193 aa9.84□□□□□ -0.83
VCAN-210ENST00000513960 ADGRE1Q14246 886 aa9.84□□□□□ -0.83
VCAN-210ENST00000513960 PTK2BQ14289 1009 aa9.84□□□□□ -0.83
VCAN-210ENST00000513960 ADGRF2Q8IZF7 708 aa9.84□□□□□ -0.83
VCAN-210ENST00000513960 DSELQ8IZU8 1212 aa9.84□□□□□ -0.83
VCAN-210ENST00000513960 TTC39CQ8N584 583 aa9.84□□□□□ -0.83
VCAN-210ENST00000513960 GRIN3AQ8TCU5 1115 aa9.84□□□□□ -0.83
VCAN-210ENST00000513960 RXFP2Q8WXD0 754 aa9.84□□□□□ -0.83
VCAN-210ENST00000513960 MCRS1Q96EZ8 462 aa9.84□□□□□ -0.83
VCAN-210ENST00000513960 MAML3Q96JK9 1138 aa9.84□□□□□ -0.83
VCAN-210ENST00000513960 OR52B2Q96RD2 323 aa9.84□□□□□ -0.83
VCAN-210ENST00000513960 YIPF2Q9BWQ6 316 aa9.84□□□□□ -0.83
VCAN-210ENST00000513960 C1orf21Q9H246 121 aa9.84□□□□□ -0.83
VCAN-210ENST00000513960 WDR41Q9HAD4 459 aa9.84□□□□□ -0.83
VCAN-210ENST00000513960 TMEM216Q9P0N5 145 aa9.84□□□□□ -0.83
VCAN-210ENST00000513960 FETUBQ9UGM5 382 aa9.84□□□□□ -0.83
VCAN-210ENST00000513960 MYRFQ9Y2G1 1151 aa9.84□□□□□ -0.83
VCAN-210ENST00000513960 CDY2AQ9Y6F7 541 aa9.84□□□□□ -0.83
VCAN-210ENST00000513960 CDY1Q9Y6F8 540 aa9.84□□□□□ -0.83
VCAN-210ENST00000513960 GOLGA8TH3BQL2 631 aa9.84□□□□□ -0.83
VCAN-210ENST00000513960 ME2P23368 584 aa9.84□□□□□ -0.83
VCAN-210ENST00000513960 CRHR1P34998 444 aa9.84□□□□□ -0.83
VCAN-210ENST00000513960 GPD2P43304 727 aa9.84□□□□□ -0.83
VCAN-210ENST00000513960 ZNF143P52747 638 aaPredicted RBP9.84□□□□□ -0.83
VCAN-210ENST00000513960 NDST1P52848 882 aa9.84□□□□□ -0.83
VCAN-210ENST00000513960 SNAPC2Q13487 334 aa9.84□□□□□ -0.83
VCAN-210ENST00000513960 NEDD8Q15843 81 aa9.84□□□□□ -0.83
VCAN-210ENST00000513960 TEX44Q53QW1 395 aa9.84□□□□□ -0.83
VCAN-210ENST00000513960 RAB6CQ53S08 254 aa9.84□□□□□ -0.83
VCAN-210ENST00000513960 MTX3Q5HYI7 312 aa9.84□□□□□ -0.83
VCAN-210ENST00000513960 HEATR6Q6AI08 1181 aaKnown RBP9.84□□□□□ -0.83
VCAN-210ENST00000513960 MOB2Q70IA6 237 aa9.84□□□□□ -0.83
VCAN-210ENST00000513960 TMEM130Q8N3G9 435 aa9.84□□□□□ -0.83
VCAN-210ENST00000513960 FAM47BQ8NA70 645 aa9.84□□□□□ -0.83
VCAN-210ENST00000513960 NLGN2Q8NFZ4 835 aa9.84□□□□□ -0.83
VCAN-210ENST00000513960 PGLYRP2Q96PD5 576 aa9.84□□□□□ -0.83
VCAN-210ENST00000513960 NT5C1AQ9BXI3 368 aa9.84□□□□□ -0.83
VCAN-210ENST00000513960 NFKBIZQ9BYH8 718 aa9.84□□□□□ -0.83
VCAN-210ENST00000513960 RAB6CQ9H0N0 254 aa9.84□□□□□ -0.83
VCAN-210ENST00000513960 PLGRKTQ9HBL7 147 aa9.84□□□□□ -0.83
VCAN-210ENST00000513960 FAM49BQ9NUQ9 324 aa9.84□□□□□ -0.83
VCAN-210ENST00000513960 ZDHHC7Q9NXF8 308 aa9.84□□□□□ -0.83
VCAN-210ENST00000513960 PCDHGA4Q9Y5G9 962 aa9.84□□□□□ -0.83
VCAN-210ENST00000513960 V9GYQ6 96 aa9.84□□□□□ -0.83
VCAN-210ENST00000513960 SIP14410 1827 aa9.84□□□□□ -0.83
VCAN-210ENST00000513960 ADORA2AP29274 412 aa9.84□□□□□ -0.83
VCAN-210ENST00000513960 AVPR1AP37288 418 aa9.84□□□□□ -0.83
VCAN-210ENST00000513960 RALGDSQ12967 914 aa9.84□□□□□ -0.83
VCAN-210ENST00000513960 PRPSAP1Q14558 356 aa9.84□□□□□ -0.83
VCAN-210ENST00000513960 ANKDD1AQ495B1 522 aa9.84□□□□□ -0.83
VCAN-210ENST00000513960 FAM47CQ5HY64 1035 aa9.84□□□□□ -0.83
VCAN-210ENST00000513960 GPR107Q5VW38 600 aa9.84□□□□□ -0.83
VCAN-210ENST00000513960 SLC9A4Q6AI14 798 aa9.84□□□□□ -0.83
VCAN-210ENST00000513960 XKR5Q6UX68 686 aa9.84□□□□□ -0.83
VCAN-210ENST00000513960 ARCQ7LC44 396 aa9.84□□□□□ -0.83
VCAN-210ENST00000513960 ZNF410Q86VK4 478 aa9.84□□□□□ -0.83
VCAN-210ENST00000513960 NUP93Q8N1F7 819 aa9.84□□□□□ -0.83
VCAN-210ENST00000513960 CCDC97Q96F63 343 aaPredicted RBP9.84□□□□□ -0.83
VCAN-210ENST00000513960 KIF12Q96FN5 646 aa9.84□□□□□ -0.83
VCAN-210ENST00000513960 FERMT1Q9BQL6 677 aa9.84□□□□□ -0.83
VCAN-210ENST00000513960 FAM96AQ9H5X1 160 aa9.84□□□□□ -0.83
VCAN-210ENST00000513960 CAB39LQ9H9S4 337 aa9.84□□□□□ -0.83
VCAN-210ENST00000513960 DPP3Q9NY33 737 aa9.84□□□□□ -0.83
VCAN-210ENST00000513960 TSPAN16Q9UKR8 245 aa9.84□□□□□ -0.83
VCAN-210ENST00000513960 RAB26Q9ULW5 256 aa9.84□□□□□ -0.83
VCAN-210ENST00000513960 SORCS3Q9UPU3 1222 aa9.84□□□□□ -0.83
VCAN-210ENST00000513960 GINS2Q9Y248 185 aa9.84□□□□□ -0.83
VCAN-210ENST00000513960 ZBTB14O43829 449 aa9.83□□□□□ -0.84
VCAN-210ENST00000513960 GPC4O75487 556 aa9.83□□□□□ -0.84
VCAN-210ENST00000513960 LGALS2P05162 132 aa9.83□□□□□ -0.84
VCAN-210ENST00000513960 ARF4P18085 180 aaPredicted RBP9.83□□□□□ -0.84
VCAN-210ENST00000513960 MPSTP25325 297 aa9.83□□□□□ -0.84
VCAN-210ENST00000513960 MGAT1P26572 445 aa9.83□□□□□ -0.84
VCAN-210ENST00000513960 GABRB2P47870 512 aa9.83□□□□□ -0.84
VCAN-210ENST00000513960 TPD52P55327 224 aaPredicted RBP9.83□□□□□ -0.84
VCAN-210ENST00000513960 C21orf59P57076 290 aa9.83□□□□□ -0.84
VCAN-210ENST00000513960 GEN1Q17RS7 908 aa9.83□□□□□ -0.84
VCAN-210ENST00000513960 SLC10A6Q3KNW5 377 aa9.83□□□□□ -0.84
VCAN-210ENST00000513960 GJC2Q5T442 439 aaPredicted RBP9.83□□□□□ -0.84
VCAN-210ENST00000513960 POTEHQ6S545 545 aa9.83□□□□□ -0.84
VCAN-210ENST00000513960 ZBTB49Q6ZSB9 765 aa9.83□□□□□ -0.84
VCAN-210ENST00000513960 ADGRG6Q86SQ4 1221 aa9.83□□□□□ -0.84
VCAN-210ENST00000513960 MARVELD2Q8N4S9 558 aa9.83□□□□□ -0.84
VCAN-210ENST00000513960 FNDC8Q8TC99 324 aa9.83□□□□□ -0.84
VCAN-210ENST00000513960 PCDHAC1Q9H158 963 aa9.83□□□□□ -0.84
VCAN-210ENST00000513960 PDZD7Q9H5P4 517 aa9.83□□□□□ -0.84
VCAN-210ENST00000513960 COQ10BQ9H8M1 238 aa9.83□□□□□ -0.84
VCAN-210ENST00000513960 POPDC2Q9HBU9 364 aa9.83□□□□□ -0.84
VCAN-210ENST00000513960 KIAA1257Q9ULG3 409 aa9.83□□□□□ -0.84
VCAN-210ENST00000513960 POLR2AP24928 1970 aaKnown RBP9.83□□□□□ -0.84
VCAN-210ENST00000513960 DNAJC25-GNG10A0A024R161 153 aa9.83□□□□□ -0.84
VCAN-210ENST00000513960 E7ESA3 106 aa9.83□□□□□ -0.84
VCAN-210ENST00000513960 J3QRK9 145 aa9.83□□□□□ -0.84
VCAN-210ENST00000513960 USP12O75317 370 aa9.83□□□□□ -0.84
VCAN-210ENST00000513960 PTPN1P18031 435 aaKnown RBP9.83□□□□□ -0.84
VCAN-210ENST00000513960 MAP4P27816 1152 aaKnown RBP9.83□□□□□ -0.84
VCAN-210ENST00000513960 CCR10P46092 362 aa9.83□□□□□ -0.84
VCAN-210ENST00000513960 POU5F1BQ06416 359 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms