RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 SUN2Q9UH99 717 aa8.42□□□□□ -1.06
NEDD4-210ENST00000513957 RAPGEFL1Q9UHV5 662 aa8.42□□□□□ -1.06
NEDD4-210ENST00000513957 HCN2Q9UL51 889 aa8.42□□□□□ -1.06
NEDD4-210ENST00000513957 INTUQ9ULD6 942 aa8.42□□□□□ -1.06
NEDD4-210ENST00000513957 CLEC4EQ9ULY5 219 aa8.42□□□□□ -1.06
NEDD4-210ENST00000513957 STON1Q9Y6Q2 735 aa8.42□□□□□ -1.06
NEDD4-210ENST00000513957 VPS13AQ96RL7 3174 aa8.41□□□□□ -1.06
NEDD4-210ENST00000513957 TCRBV21S2A2A0A5A6 115 aa8.41□□□□□ -1.06
NEDD4-210ENST00000513957 ILVBLA1L0T0 632 aa8.41□□□□□ -1.06
NEDD4-210ENST00000513957 TARSL2A2RTX5 802 aaKnown RBP8.41□□□□□ -1.06
NEDD4-210ENST00000513957 PRR23AA6NEV1 266 aa8.41□□□□□ -1.06
NEDD4-210ENST00000513957 GOLGA6L6A8MZA4 724 aa8.41□□□□□ -1.06
NEDD4-210ENST00000513957 I6L893 689 aaPredicted RBP8.41□□□□□ -1.06
NEDD4-210ENST00000513957 AKR1B10O60218 316 aa8.41□□□□□ -1.06
NEDD4-210ENST00000513957 PRPSAP2O60256 369 aa8.41□□□□□ -1.06
NEDD4-210ENST00000513957 RHOCP08134 193 aa8.41□□□□□ -1.06
NEDD4-210ENST00000513957 PLEKP08567 350 aaPredicted RBP8.41□□□□□ -1.06
NEDD4-210ENST00000513957 TMEM253P0C7T8 217 aa8.41□□□□□ -1.06
NEDD4-210ENST00000513957 RHOQP17081 205 aa8.41□□□□□ -1.06
NEDD4-210ENST00000513957 CDC25BP30305 580 aa8.41□□□□□ -1.06
NEDD4-210ENST00000513957 CSKP41240 450 aa8.41□□□□□ -1.06
NEDD4-210ENST00000513957 FNTBP49356 437 aa8.41□□□□□ -1.06
NEDD4-210ENST00000513957 ATXN1P54253 815 aaKnown RBP8.41□□□□□ -1.06
NEDD4-210ENST00000513957 GEMIN4P57678 1058 aaKnown RBP8.41□□□□□ -1.06
NEDD4-210ENST00000513957 ECT2LQ008S8 904 aa8.41□□□□□ -1.06
NEDD4-210ENST00000513957 CAMK2GQ13555 558 aaPredicted RBP8.41□□□□□ -1.06
NEDD4-210ENST00000513957 HNRNPA1L2Q32P51 320 aaKnown RBP8.41□□□□□ -1.06
NEDD4-210ENST00000513957 FNDC3BQ53EP0 1204 aaKnown RBP8.41□□□□□ -1.06
NEDD4-210ENST00000513957 EMC10Q5UCC4 262 aa8.41□□□□□ -1.06
NEDD4-210ENST00000513957 LAIR1Q6GTX8 287 aa8.41□□□□□ -1.06
NEDD4-210ENST00000513957 ANO7Q6IWH7 933 aa8.41□□□□□ -1.06
NEDD4-210ENST00000513957 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.41□□□□□ -1.06
NEDD4-210ENST00000513957 RETREG3Q86VR2 466 aa8.41□□□□□ -1.06
NEDD4-210ENST00000513957 RHOT2Q8IXI1 618 aa8.41□□□□□ -1.06
NEDD4-210ENST00000513957 CCDC33Q8N5R6 958 aa8.41□□□□□ -1.06
NEDD4-210ENST00000513957 GPR161Q8N6U8 529 aaKnown RBP8.41□□□□□ -1.06
NEDD4-210ENST00000513957 IGSF8Q969P0 613 aa8.41□□□□□ -1.06
NEDD4-210ENST00000513957 MYEOVQ96EZ4 313 aa8.41□□□□□ -1.06
NEDD4-210ENST00000513957 PANX2Q96RD6 677 aa8.41□□□□□ -1.06
NEDD4-210ENST00000513957 FEM1AQ9BSK4 669 aa8.41□□□□□ -1.06
NEDD4-210ENST00000513957 THAP2Q9H0W7 228 aa8.41□□□□□ -1.06
NEDD4-210ENST00000513957 CATSPERBQ9H7T0 1116 aa8.41□□□□□ -1.06
NEDD4-210ENST00000513957 ANLNQ9NQW6 1124 aa8.41□□□□□ -1.06
NEDD4-210ENST00000513957 TMEM248Q9NWD8 314 aa8.41□□□□□ -1.06
NEDD4-210ENST00000513957 C2orf42Q9NWW7 574 aa8.41□□□□□ -1.06
NEDD4-210ENST00000513957 CACNA2D2Q9NY47 1150 aa8.41□□□□□ -1.06
NEDD4-210ENST00000513957 BCCIPQ9P287 314 aaKnown RBP eCLIP8.41□□□□□ -1.06
NEDD4-210ENST00000513957 IMPACTQ9P2X3 320 aa8.41□□□□□ -1.06
NEDD4-210ENST00000513957 IP6K2Q9UHH9 426 aa8.41□□□□□ -1.06
NEDD4-210ENST00000513957 SLC25A13Q9UJS0 675 aa8.41□□□□□ -1.06
NEDD4-210ENST00000513957 FZD10Q9ULW2 581 aa8.41□□□□□ -1.06
NEDD4-210ENST00000513957 SCML1Q9UN30 329 aa8.41□□□□□ -1.06
NEDD4-210ENST00000513957 SMG5Q9UPR3 1016 aaKnown RBP8.41□□□□□ -1.06
NEDD4-210ENST00000513957 HS3ST2Q9Y278 367 aa8.41□□□□□ -1.06
NEDD4-210ENST00000513957 R4GN57 208 aa8.41□□□□□ -1.06
NEDD4-210ENST00000513957 DMDP11532 3685 aa8.4□□□□□ -1.06
NEDD4-210ENST00000513957 EDDM13A0A1B0GTR0 161 aa8.4□□□□□ -1.06
NEDD4-210ENST00000513957 ZSCAN5CA6NGD5 496 aaPredicted RBP8.4□□□□□ -1.06
NEDD4-210ENST00000513957 WASH4PA8MWX3 477 aa8.4□□□□□ -1.06
NEDD4-210ENST00000513957 C3orf80F5H4A9 247 aa8.4□□□□□ -1.06
NEDD4-210ENST00000513957 MYO1FO00160 1098 aa8.4□□□□□ -1.06
NEDD4-210ENST00000513957 ALOX15BO15296 676 aa8.4□□□□□ -1.06
NEDD4-210ENST00000513957 LRCH4O75427 683 aa8.4□□□□□ -1.06
NEDD4-210ENST00000513957 RHOBTB1O94844 696 aa8.4□□□□□ -1.06
NEDD4-210ENST00000513957 LRIG2O94898 1065 aa8.4□□□□□ -1.06
NEDD4-210ENST00000513957 GJB6O95452 261 aa8.4□□□□□ -1.06
NEDD4-210ENST00000513957 IGLV3-19P01714 112 aa8.4□□□□□ -1.06
NEDD4-210ENST00000513957 EPHX1P07099 455 aa8.4□□□□□ -1.06
NEDD4-210ENST00000513957 GABRG2P18507 467 aa8.4□□□□□ -1.06
NEDD4-210ENST00000513957 OR1E1P30953 314 aa8.4□□□□□ -1.06
NEDD4-210ENST00000513957 MAN1A1P33908 653 aa8.4□□□□□ -1.06
NEDD4-210ENST00000513957 CYLC1P35663 651 aaPredicted RBP8.4□□□□□ -1.06
NEDD4-210ENST00000513957 EIF4A3P38919 411 aaKnown RBP8.4□□□□□ -1.06
NEDD4-210ENST00000513957 P2RY2P41231 377 aa8.4□□□□□ -1.06
NEDD4-210ENST00000513957 GALCP54803 685 aa8.4□□□□□ -1.06
NEDD4-210ENST00000513957 ADKP55263 362 aaKnown RBP8.4□□□□□ -1.06
NEDD4-210ENST00000513957 YBEYP58557 167 aaPredicted RBP8.4□□□□□ -1.06
NEDD4-210ENST00000513957 GFPT1Q06210 699 aaPredicted RBP8.4□□□□□ -1.06
NEDD4-210ENST00000513957 SLC20A2Q08357 652 aa8.4□□□□□ -1.06
NEDD4-210ENST00000513957 SEMA3BQ13214 749 aa8.4□□□□□ -1.06
NEDD4-210ENST00000513957 SIM2Q14190 667 aaPredicted RBP8.4□□□□□ -1.06
NEDD4-210ENST00000513957 ELAVL3Q14576 367 aaKnown RBP8.4□□□□□ -1.06
NEDD4-210ENST00000513957 TCEAL1Q15170 157 aa8.4□□□□□ -1.06
NEDD4-210ENST00000513957 ELF2Q15723 593 aa8.4□□□□□ -1.06
NEDD4-210ENST00000513957 PTPRNQ16849 979 aa8.4□□□□□ -1.06
NEDD4-210ENST00000513957 BOLA3Q53S33 107 aa8.4□□□□□ -1.06
NEDD4-210ENST00000513957 ALFQ53S48 1182 aa8.4□□□□□ -1.06
NEDD4-210ENST00000513957 FSCBQ5H9T9 825 aa8.4□□□□□ -1.06
NEDD4-210ENST00000513957 ERMARDQ5T6L9 678 aa8.4□□□□□ -1.06
NEDD4-210ENST00000513957 SH3PXD2AQ5TCZ1 1133 aa8.4□□□□□ -1.06
NEDD4-210ENST00000513957 HEATR6Q6AI08 1181 aaKnown RBP8.4□□□□□ -1.06
NEDD4-210ENST00000513957 SLC36A4Q6YBV0 504 aa8.4□□□□□ -1.06
NEDD4-210ENST00000513957 PHLDB2Q86SQ0 1253 aa8.4□□□□□ -1.06
NEDD4-210ENST00000513957 C14orf80Q86SX3 495 aa8.4□□□□□ -1.06
NEDD4-210ENST00000513957 NLRP14Q86W24 1093 aa8.4□□□□□ -1.06
NEDD4-210ENST00000513957 GAS2L3Q86XJ1 694 aa8.4□□□□□ -1.06
NEDD4-210ENST00000513957 CCDC185Q8N715 623 aa8.4□□□□□ -1.06
NEDD4-210ENST00000513957 TC2NQ8N9U0 490 aa8.4□□□□□ -1.06
NEDD4-210ENST00000513957 SUMF1Q8NBK3 374 aa8.4□□□□□ -1.06
NEDD4-210ENST00000513957 OR2T3Q8NH03 318 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms