RNA–Protein interactions for RNA: ENST00000513438.1

POLR2J3-217, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3 BASIC

Gene POLR2J3, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-217ENST00000513438 APC2O95996 2303 aa13.78□□□□□ -0.2
POLR2J3-217ENST00000513438 TLR4O00206 839 aa13.78□□□□□ -0.2
POLR2J3-217ENST00000513438 CBX4O00257 560 aa13.78□□□□□ -0.2
POLR2J3-217ENST00000513438 ENC1O14682 589 aa13.78□□□□□ -0.2
POLR2J3-217ENST00000513438 LDOC1O95751 146 aaPredicted RBP13.78□□□□□ -0.2
POLR2J3-217ENST00000513438 METAP1P53582 386 aa13.78□□□□□ -0.2
POLR2J3-217ENST00000513438 OXCT1P55809 520 aa13.78□□□□□ -0.2
POLR2J3-217ENST00000513438 BNIP3Q12983 259 aa13.78□□□□□ -0.2
POLR2J3-217ENST00000513438 AUHQ13825 339 aaKnown RBP13.78□□□□□ -0.2
POLR2J3-217ENST00000513438 ELAVL3Q14576 367 aaKnown RBP13.78□□□□□ -0.2
POLR2J3-217ENST00000513438 SMAD1Q15797 465 aaKnown RBP13.78□□□□□ -0.2
POLR2J3-217ENST00000513438 TTC39BQ5VTQ0 682 aaPredicted RBP13.78□□□□□ -0.2
POLR2J3-217ENST00000513438 CXorf57Q6NSI4 855 aaKnown RBP13.78□□□□□ -0.2
POLR2J3-217ENST00000513438 PASD1Q8IV76 773 aa13.78□□□□□ -0.2
POLR2J3-217ENST00000513438 OR52K2Q8NGK3 314 aa13.78□□□□□ -0.2
POLR2J3-217ENST00000513438 SAP25Q8TEE9 199 aa13.78□□□□□ -0.2
POLR2J3-217ENST00000513438 OR8D1Q8WZ84 308 aa13.78□□□□□ -0.2
POLR2J3-217ENST00000513438 SHC3Q92529 594 aa13.78□□□□□ -0.2
POLR2J3-217ENST00000513438 RPRD1AQ96P16 312 aaPredicted RBP13.78□□□□□ -0.2
POLR2J3-217ENST00000513438 SPAG5Q96R06 1193 aa13.78□□□□□ -0.2
POLR2J3-217ENST00000513438 PPP1R9BQ96SB3 815 aa13.78□□□□□ -0.2
POLR2J3-217ENST00000513438 FEM1AQ9BSK4 669 aa13.78□□□□□ -0.2
POLR2J3-217ENST00000513438 GDF3Q9NR23 364 aa13.78□□□□□ -0.2
POLR2J3-217ENST00000513438 ASNSD1Q9NWL6 643 aa13.78□□□□□ -0.2
POLR2J3-217ENST00000513438 DKK4Q9UBT3 224 aa13.78□□□□□ -0.2
POLR2J3-217ENST00000513438 APEX2Q9UBZ4 518 aa13.78□□□□□ -0.2
POLR2J3-217ENST00000513438 RWDD2AQ9UIY3 292 aa13.78□□□□□ -0.2
POLR2J3-217ENST00000513438 SARDHQ9UL12 918 aa13.78□□□□□ -0.2
POLR2J3-217ENST00000513438 VANGL2Q9ULK5 521 aa13.78□□□□□ -0.2
POLR2J3-217ENST00000513438 TPX2Q9ULW0 747 aaKnown RBP13.78□□□□□ -0.2
POLR2J3-217ENST00000513438 PCDHGC3Q9UN70 934 aa13.78□□□□□ -0.2
POLR2J3-217ENST00000513438 TP53BP1Q12888 1972 aaPredicted RBP13.78□□□□□ -0.2
POLR2J3-217ENST00000513438 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.77□□□□□ -0.21
POLR2J3-217ENST00000513438 LATO43561 262 aa13.77□□□□□ -0.21
POLR2J3-217ENST00000513438 ATP9BO43861 1147 aa13.77□□□□□ -0.21
POLR2J3-217ENST00000513438 HSF2BPO75031 334 aa13.77□□□□□ -0.21
POLR2J3-217ENST00000513438 RTN2O75298 545 aa13.77□□□□□ -0.21
POLR2J3-217ENST00000513438 PON1P27169 355 aa13.77□□□□□ -0.21
POLR2J3-217ENST00000513438 VASPP50552 380 aaPredicted RBP13.77□□□□□ -0.21
POLR2J3-217ENST00000513438 IRAK1P51617 712 aa13.77□□□□□ -0.21
POLR2J3-217ENST00000513438 NXPH1P58417 271 aa13.77□□□□□ -0.21
POLR2J3-217ENST00000513438 PPP2CBP62714 309 aa13.77□□□□□ -0.21
POLR2J3-217ENST00000513438 PPP2CAP67775 309 aa13.77□□□□□ -0.21
POLR2J3-217ENST00000513438 CENPCQ03188 943 aa13.77□□□□□ -0.21
POLR2J3-217ENST00000513438 PTK2Q05397 1052 aa13.77□□□□□ -0.21
POLR2J3-217ENST00000513438 DNAJC3Q13217 504 aa13.77□□□□□ -0.21
POLR2J3-217ENST00000513438 NME3Q13232 169 aa13.77□□□□□ -0.21
POLR2J3-217ENST00000513438 ZNF177Q13360 481 aaPredicted RBP13.77□□□□□ -0.21
POLR2J3-217ENST00000513438 DLG2Q15700 870 aa13.77□□□□□ -0.21
POLR2J3-217ENST00000513438 CAMK4Q16566 473 aa13.77□□□□□ -0.21
POLR2J3-217ENST00000513438 EXOC3L4Q17RC7 722 aa13.77□□□□□ -0.21
POLR2J3-217ENST00000513438 SLC45A4Q5BKX6 768 aa13.77□□□□□ -0.21
POLR2J3-217ENST00000513438 C11orf57Q6ZUT1 292 aaPredicted RBP13.77□□□□□ -0.21
POLR2J3-217ENST00000513438 FAM183BPQ6ZVS7 135 aa13.77□□□□□ -0.21
POLR2J3-217ENST00000513438 C14orf80Q86SX3 495 aa13.77□□□□□ -0.21
POLR2J3-217ENST00000513438 PRPF39Q86UA1 669 aaKnown RBP13.77□□□□□ -0.21
POLR2J3-217ENST00000513438 IRF2BP1Q8IU81 584 aa13.77□□□□□ -0.21
POLR2J3-217ENST00000513438 EID2Q8N6I1 236 aa13.77□□□□□ -0.21
POLR2J3-217ENST00000513438 PDCD7Q8N8D1 485 aaKnown RBP13.77□□□□□ -0.21
POLR2J3-217ENST00000513438 CNDP2Q96KP4 475 aaKnown RBP13.77□□□□□ -0.21
POLR2J3-217ENST00000513438 SIK2Q9H0K1 926 aa13.77□□□□□ -0.21
POLR2J3-217ENST00000513438 KIAA1468Q9P260 1216 aa13.77□□□□□ -0.21
POLR2J3-217ENST00000513438 ARHGAP20Q9P2F6 1191 aa13.77□□□□□ -0.21
POLR2J3-217ENST00000513438 SLC25A13Q9UJS0 675 aa13.77□□□□□ -0.21
POLR2J3-217ENST00000513438 HS3ST4Q9Y661 456 aa13.77□□□□□ -0.21
POLR2J3-217ENST00000513438 DOCK9Q9BZ29 2069 aa13.76□□□□□ -0.21
POLR2J3-217ENST00000513438 M0QYT0 321 aa13.76□□□□□ -0.21
POLR2J3-217ENST00000513438 FOXN3O00409 490 aaPredicted RBP13.76□□□□□ -0.21
POLR2J3-217ENST00000513438 PAGE1O75459 146 aa13.76□□□□□ -0.21
POLR2J3-217ENST00000513438 ERBB2P04626 1255 aa13.76□□□□□ -0.21
POLR2J3-217ENST00000513438 ZNF18P17022 549 aa13.76□□□□□ -0.21
POLR2J3-217ENST00000513438 MAT2AP31153 395 aaKnown RBP13.76□□□□□ -0.21
POLR2J3-217ENST00000513438 NOS2P35228 1153 aa13.76□□□□□ -0.21
POLR2J3-217ENST00000513438 KRT9P35527 623 aa13.76□□□□□ -0.21
POLR2J3-217ENST00000513438 GGCXP38435 758 aa13.76□□□□□ -0.21
POLR2J3-217ENST00000513438 SLC6A3Q01959 620 aa13.76□□□□□ -0.21
POLR2J3-217ENST00000513438 CNTN1Q12860 1018 aa13.76□□□□□ -0.21
POLR2J3-217ENST00000513438 POM121L1PQ3SYA9 428 aa13.76□□□□□ -0.21
POLR2J3-217ENST00000513438 FAM46CQ5VWP2 391 aa13.76□□□□□ -0.21
POLR2J3-217ENST00000513438 NAPEPLDQ6IQ20 393 aa13.76□□□□□ -0.21
POLR2J3-217ENST00000513438 OLFML1Q6UWY5 402 aa13.76□□□□□ -0.21
POLR2J3-217ENST00000513438 DSG4Q86SJ6 1040 aa13.76□□□□□ -0.21
POLR2J3-217ENST00000513438 TMPRSS12Q86WS5 348 aa13.76□□□□□ -0.21
POLR2J3-217ENST00000513438 SPATS2Q86XZ4 545 aaKnown RBP13.76□□□□□ -0.21
POLR2J3-217ENST00000513438 MFSD2AQ8NA29 543 aa13.76□□□□□ -0.21
POLR2J3-217ENST00000513438 C1orf131Q8NDD1 294 aaKnown RBP13.76□□□□□ -0.21
POLR2J3-217ENST00000513438 FAM131CQ96AQ9 280 aa13.76□□□□□ -0.21
POLR2J3-217ENST00000513438 NOX5Q96PH1 765 aa13.76□□□□□ -0.21
POLR2J3-217ENST00000513438 KDM4CQ9H3R0 1056 aa13.76□□□□□ -0.21
POLR2J3-217ENST00000513438 VPS28Q9UK41 221 aa13.76□□□□□ -0.21
POLR2J3-217ENST00000513438 DNAJC12Q9UKB3 198 aa13.76□□□□□ -0.21
POLR2J3-217ENST00000513438 PPM1HQ9ULR3 514 aa13.76□□□□□ -0.21
POLR2J3-217ENST00000513438 PCDHGA1Q9Y5H4 931 aa13.76□□□□□ -0.21
POLR2J3-217ENST00000513438 OR51B4Q9Y5P0 310 aa13.76□□□□□ -0.21
POLR2J3-217ENST00000513438 GTPBP10A4D1E9 387 aaKnown RBP13.75□□□□□ -0.21
POLR2J3-217ENST00000513438 MCF2LO15068 1137 aa13.75□□□□□ -0.21
POLR2J3-217ENST00000513438 YKT6O15498 198 aa13.75□□□□□ -0.21
POLR2J3-217ENST00000513438 SLC7A4O43246 635 aa13.75□□□□□ -0.21
POLR2J3-217ENST00000513438 PLRG1O43660 514 aaKnown RBP13.75□□□□□ -0.21
POLR2J3-217ENST00000513438 BNIP3LO60238 219 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms