RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 CERS4Q9HA82 394 aa4.32□□□□□ -1.72
VCAN-209ENST00000513016 ARHGEF4Q9NR80 690 aa4.32□□□□□ -1.72
VCAN-209ENST00000513016 NCKIPSDQ9NZQ3 722 aa4.32□□□□□ -1.72
VCAN-209ENST00000513016 TLL2Q9Y6L7 1015 aa4.32□□□□□ -1.72
VCAN-209ENST00000513016 GSAPA4D1B5 854 aa4.32□□□□□ -1.72
VCAN-209ENST00000513016 MYO1CO00159 1063 aa4.32□□□□□ -1.72
VCAN-209ENST00000513016 AOC2O75106 756 aa4.32□□□□□ -1.72
VCAN-209ENST00000513016 SKIV2L2P42285 1042 aaKnown RBP4.32□□□□□ -1.72
VCAN-209ENST00000513016 DHPSP49366 369 aaPredicted RBP4.32□□□□□ -1.72
VCAN-209ENST00000513016 DGKEP52429 567 aa4.32□□□□□ -1.72
VCAN-209ENST00000513016 CRY1Q16526 586 aa4.32□□□□□ -1.72
VCAN-209ENST00000513016 LONRF1Q17RB8 773 aa4.32□□□□□ -1.72
VCAN-209ENST00000513016 AGBL2Q5U5Z8 902 aa4.32□□□□□ -1.72
VCAN-209ENST00000513016 FBXO39Q8N4B4 442 aa4.32□□□□□ -1.72
VCAN-209ENST00000513016 KLHL23Q8NBE8 558 aa4.32□□□□□ -1.72
VCAN-209ENST00000513016 SRFBP1Q8NEF9 429 aaKnown RBP4.32□□□□□ -1.72
VCAN-209ENST00000513016 TPCN2Q8NHX9 752 aa4.32□□□□□ -1.72
VCAN-209ENST00000513016 SPATA5L1Q9BVQ7 753 aa4.32□□□□□ -1.72
VCAN-209ENST00000513016 CATSPERZQ9NTU4 200 aa4.32□□□□□ -1.72
VCAN-209ENST00000513016 PCDHGC5Q9Y5F6 944 aa4.32□□□□□ -1.72
VCAN-209ENST00000513016 A0A087X1B8 175 aa4.32□□□□□ -1.72
VCAN-209ENST00000513016 PPP1R3GB7ZBB8 358 aa4.32□□□□□ -1.72
VCAN-209ENST00000513016 NT5C1B-RDH14C9J2C7 533 aa4.32□□□□□ -1.72
VCAN-209ENST00000513016 C8AP07357 584 aa4.32□□□□□ -1.72
VCAN-209ENST00000513016 ENO3P13929 434 aaPredicted RBP4.32□□□□□ -1.72
VCAN-209ENST00000513016 SLC16A1P53985 500 aa4.32□□□□□ -1.72
VCAN-209ENST00000513016 PLOD1Q02809 727 aaPredicted RBP4.32□□□□□ -1.72
VCAN-209ENST00000513016 DUSP4Q13115 394 aa4.32□□□□□ -1.72
VCAN-209ENST00000513016 MMRN1Q13201 1228 aa4.32□□□□□ -1.72
VCAN-209ENST00000513016 BIKQ13323 160 aa4.32□□□□□ -1.72
VCAN-209ENST00000513016 ZC3H12AQ5D1E8 599 aaKnown RBP4.32□□□□□ -1.72
VCAN-209ENST00000513016 MILR1Q7Z6M3 343 aa4.32□□□□□ -1.72
VCAN-209ENST00000513016 ADGRA1Q86SQ6 560 aa4.32□□□□□ -1.72
VCAN-209ENST00000513016 SLC44A2Q8IWA5 706 aaPredicted RBP4.32□□□□□ -1.72
VCAN-209ENST00000513016 DENND1AQ8TEH3 1009 aa4.32□□□□□ -1.72
VCAN-209ENST00000513016 KAT2BQ92831 832 aa4.32□□□□□ -1.72
VCAN-209ENST00000513016 TATDN2Q93075 761 aa4.32□□□□□ -1.72
VCAN-209ENST00000513016 ATP6V1G3Q96LB4 118 aa4.32□□□□□ -1.72
VCAN-209ENST00000513016 INPP4AQ96PE3 977 aaPredicted RBP4.32□□□□□ -1.72
VCAN-209ENST00000513016 ACOX2Q99424 681 aa4.32□□□□□ -1.72
VCAN-209ENST00000513016 PCDH9Q9HC56 1237 aa4.32□□□□□ -1.72
VCAN-209ENST00000513016 IMPAD1Q9NX62 359 aa4.32□□□□□ -1.72
VCAN-209ENST00000513016 SH3BP4Q9P0V3 963 aa4.32□□□□□ -1.72
VCAN-209ENST00000513016 OPTCQ9UBM4 332 aa4.32□□□□□ -1.72
VCAN-209ENST00000513016 NEMP2A6NFY4 417 aa4.32□□□□□ -1.72
VCAN-209ENST00000513016 TRIM49D1C9J1S8 452 aa4.32□□□□□ -1.72
VCAN-209ENST00000513016 EPHX1P07099 455 aa4.32□□□□□ -1.72
VCAN-209ENST00000513016 AMPD1P23109 780 aa4.32□□□□□ -1.72
VCAN-209ENST00000513016 GP5P40197 560 aa4.32□□□□□ -1.72
VCAN-209ENST00000513016 CASRP41180 1078 aa4.32□□□□□ -1.72
VCAN-209ENST00000513016 SERPINB10P48595 397 aa4.32□□□□□ -1.72
VCAN-209ENST00000513016 SOX10P56693 466 aa4.32□□□□□ -1.72
VCAN-209ENST00000513016 PURAQ00577 322 aaKnown RBP4.32□□□□□ -1.72
VCAN-209ENST00000513016 TAF13Q15543 124 aa4.32□□□□□ -1.72
VCAN-209ENST00000513016 SH3D19Q5HYK7 790 aa4.32□□□□□ -1.72
VCAN-209ENST00000513016 RASGRP2Q7LDG7 609 aa4.32□□□□□ -1.72
VCAN-209ENST00000513016 FAM35AQ86V20 835 aa4.32□□□□□ -1.72
VCAN-209ENST00000513016 ICA1LQ8NDH6 482 aa4.32□□□□□ -1.72
VCAN-209ENST00000513016 DBF4BQ8NFT6 615 aa4.32□□□□□ -1.72
VCAN-209ENST00000513016 OR14C36Q8NHC7 312 aa4.32□□□□□ -1.72
VCAN-209ENST00000513016 HCAR2Q8TDS4 363 aa4.32□□□□□ -1.72
VCAN-209ENST00000513016 NECTIN4Q96NY8 510 aa4.32□□□□□ -1.72
VCAN-209ENST00000513016 TBCDQ9BTW9 1192 aa4.32□□□□□ -1.72
VCAN-209ENST00000513016 WHRNQ9P202 907 aa4.32□□□□□ -1.72
VCAN-209ENST00000513016 SNX6Q9UNH7 406 aa4.32□□□□□ -1.72
VCAN-209ENST00000513016 F8VP50 259 aa4.32□□□□□ -1.72
VCAN-209ENST00000513016 DNM1LO00429 736 aa4.32□□□□□ -1.72
VCAN-209ENST00000513016 MAN2B1O00754 1011 aa4.32□□□□□ -1.72
VCAN-209ENST00000513016 RNASEH2AO75792 299 aaKnown RBP4.32□□□□□ -1.72
VCAN-209ENST00000513016 MLYCDO95822 493 aa4.32□□□□□ -1.72
VCAN-209ENST00000513016 CFIP05156 583 aa4.32□□□□□ -1.72
VCAN-209ENST00000513016 PYGMP11217 842 aa4.32□□□□□ -1.72
VCAN-209ENST00000513016 PGAM1P18669 254 aa4.32□□□□□ -1.72
VCAN-209ENST00000513016 NUP107P57740 925 aa4.32□□□□□ -1.72
VCAN-209ENST00000513016 YBEYP58557 167 aaPredicted RBP4.32□□□□□ -1.72
VCAN-209ENST00000513016 IRF8Q02556 426 aa4.32□□□□□ -1.72
VCAN-209ENST00000513016 RUNX1T1Q06455 604 aa4.32□□□□□ -1.72
VCAN-209ENST00000513016 MROH9Q5TGP6 573 aa4.32□□□□□ -1.72
VCAN-209ENST00000513016 FAAH2Q6GMR7 532 aa4.32□□□□□ -1.72
VCAN-209ENST00000513016 FAM45BPQ6NSW5 357 aa4.32□□□□□ -1.72
VCAN-209ENST00000513016 ZC3H14Q6PJT7 736 aaKnown RBP4.32□□□□□ -1.72
VCAN-209ENST00000513016 FAM45AQ8TCE6 357 aa4.32□□□□□ -1.72
VCAN-209ENST00000513016 PLD4Q96BZ4 506 aa4.32□□□□□ -1.72
VCAN-209ENST00000513016 BTN2A3PQ96KV6 586 aa4.32□□□□□ -1.72
VCAN-209ENST00000513016 RHBGQ9H310 441 aa4.32□□□□□ -1.72
VCAN-209ENST00000513016 SLC2A4RGQ9NR83 387 aa4.32□□□□□ -1.72
VCAN-209ENST00000513016 HEBP2Q9Y5Z4 205 aa4.32□□□□□ -1.72
VCAN-209ENST00000513016 CFAP73A6NFT4 308 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 FAM220BPB1ANY3 271 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 TEX28O15482 410 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 FSBPO95073 299 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 ACRP10323 421 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 BRCC3P46736 316 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 POU5F1Q01860 360 aaKnown RBP4.31□□□□□ -1.72
VCAN-209ENST00000513016 NR6A1Q15406 480 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 PKN1Q16512 942 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 KYNUQ16719 465 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 TAF8Q7Z7C8 310 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 SRLQ86TD4 932 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 PIGZQ86VD9 579 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms