RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 TRA2AQ13595 282 aaKnown RBP eCLIP5.17□□□□□ -1.58
TRAPPC11-208ENST00000511955 MORF4L2Q15014 288 aa5.17□□□□□ -1.58
TRAPPC11-208ENST00000511955 PCSK7Q16549 785 aa5.17□□□□□ -1.58
TRAPPC11-208ENST00000511955 SLC39A12Q504Y0 691 aa5.17□□□□□ -1.58
TRAPPC11-208ENST00000511955 SLFN13Q68D06 897 aa5.17□□□□□ -1.58
TRAPPC11-208ENST00000511955 SEZ6L2Q6UXD5 910 aa5.17□□□□□ -1.58
TRAPPC11-208ENST00000511955 KDM7AQ6ZMT4 941 aa5.17□□□□□ -1.58
TRAPPC11-208ENST00000511955 KIAA1328Q86T90 577 aa5.17□□□□□ -1.58
TRAPPC11-208ENST00000511955 LRRC34Q8IZ02 419 aa5.17□□□□□ -1.58
TRAPPC11-208ENST00000511955 MAML2Q8IZL2 1156 aaPredicted RBP5.17□□□□□ -1.58
TRAPPC11-208ENST00000511955 LSMEM2Q8N112 164 aa5.17□□□□□ -1.58
TRAPPC11-208ENST00000511955 DNAAF3Q8N9W5 541 aa5.17□□□□□ -1.58
TRAPPC11-208ENST00000511955 LRRN4CLQ8ND94 238 aa5.17□□□□□ -1.58
TRAPPC11-208ENST00000511955 MRPS27Q92552 414 aaKnown RBP5.17□□□□□ -1.58
TRAPPC11-208ENST00000511955 STAMQ92783 540 aa5.17□□□□□ -1.58
TRAPPC11-208ENST00000511955 PGAP3Q96FM1 320 aaPredicted RBP5.17□□□□□ -1.58
TRAPPC11-208ENST00000511955 CFAP57Q96MR6 1250 aa5.17□□□□□ -1.58
TRAPPC11-208ENST00000511955 ALS2CR12Q96Q35 445 aa5.17□□□□□ -1.58
TRAPPC11-208ENST00000511955 FAM118BQ9BPY3 351 aa5.17□□□□□ -1.58
TRAPPC11-208ENST00000511955 STRA6Q9BX79 667 aa5.17□□□□□ -1.58
TRAPPC11-208ENST00000511955 FRMD8P1Q9BZ68 369 aaPredicted RBP5.17□□□□□ -1.58
TRAPPC11-208ENST00000511955 BTBD1Q9H0C5 482 aa5.17□□□□□ -1.58
TRAPPC11-208ENST00000511955 SH2D4AQ9H788 454 aa5.17□□□□□ -1.58
TRAPPC11-208ENST00000511955 KAT14Q9H8E8 782 aa5.17□□□□□ -1.58
TRAPPC11-208ENST00000511955 MBD2Q9UBB5 411 aa5.17□□□□□ -1.58
TRAPPC11-208ENST00000511955 PHF24Q9UPV7 400 aa5.17□□□□□ -1.58
TRAPPC11-208ENST00000511955 SATB2Q9UPW6 733 aa5.17□□□□□ -1.58
TRAPPC11-208ENST00000511955 AKT3Q9Y243 479 aa5.17□□□□□ -1.58
TRAPPC11-208ENST00000511955 POLR3KQ9Y2Y1 108 aaPredicted RBP5.17□□□□□ -1.58
TRAPPC11-208ENST00000511955 SNX14Q9Y5W7 946 aa5.17□□□□□ -1.58
TRAPPC11-208ENST00000511955 KIAA1217Q5T5P2 1943 aa5.16□□□□□ -1.58
TRAPPC11-208ENST00000511955 A0A1B0GUA9 196 aa5.16□□□□□ -1.58
TRAPPC11-208ENST00000511955 A0A1W2PQ09 198 aa5.16□□□□□ -1.58
TRAPPC11-208ENST00000511955 GOLGA8JA6NMD2 632 aa5.16□□□□□ -1.58
TRAPPC11-208ENST00000511955 TMEM232C9JQI7 657 aa5.16□□□□□ -1.58
TRAPPC11-208ENST00000511955 GOLGA8TH3BQL2 631 aa5.16□□□□□ -1.58
TRAPPC11-208ENST00000511955 ARHGAP33O14559 1287 aa5.16□□□□□ -1.58
TRAPPC11-208ENST00000511955 RNF40O75150 1001 aa5.16□□□□□ -1.58
TRAPPC11-208ENST00000511955 CILPO75339 1184 aa5.16□□□□□ -1.58
TRAPPC11-208ENST00000511955 KRT37O76014 449 aa5.16□□□□□ -1.58
TRAPPC11-208ENST00000511955 CLPTM1O96005 669 aa5.16□□□□□ -1.58
TRAPPC11-208ENST00000511955 CHRNA1P02708 482 aa5.16□□□□□ -1.58
TRAPPC11-208ENST00000511955 INHAP05111 366 aa5.16□□□□□ -1.58
TRAPPC11-208ENST00000511955 TXNP10599 105 aaKnown RBP5.16□□□□□ -1.58
TRAPPC11-208ENST00000511955 ATP2A2P16615 1042 aaKnown RBP5.16□□□□□ -1.58
TRAPPC11-208ENST00000511955 GLRA2P23416 452 aa5.16□□□□□ -1.58
TRAPPC11-208ENST00000511955 MRPL12P52815 198 aaKnown RBP5.16□□□□□ -1.58
TRAPPC11-208ENST00000511955 ANTXR2P58335 489 aa5.16□□□□□ -1.58
TRAPPC11-208ENST00000511955 FOXK2Q01167 660 aa5.16□□□□□ -1.58
TRAPPC11-208ENST00000511955 NPRL3Q12980 569 aa5.16□□□□□ -1.58
TRAPPC11-208ENST00000511955 CSTF3Q12996 717 aaKnown RBP5.16□□□□□ -1.58
TRAPPC11-208ENST00000511955 RFTN1Q14699 578 aaPredicted RBP5.16□□□□□ -1.58
TRAPPC11-208ENST00000511955 TARBP2Q15633 366 aaKnown RBP5.16□□□□□ -1.58
TRAPPC11-208ENST00000511955 SGO1Q5FBB7 561 aa5.16□□□□□ -1.58
TRAPPC11-208ENST00000511955 GLRA4Q5JXX5 417 aa5.16□□□□□ -1.58
TRAPPC11-208ENST00000511955 VARS2Q5ST30 1063 aaKnown RBP5.16□□□□□ -1.58
TRAPPC11-208ENST00000511955 RCSD1Q6JBY9 416 aa5.16□□□□□ -1.58
TRAPPC11-208ENST00000511955 PLPPR4Q7Z2D5 763 aa5.16□□□□□ -1.58
TRAPPC11-208ENST00000511955 TLK2Q86UE8 772 aa5.16□□□□□ -1.58
TRAPPC11-208ENST00000511955 C12orf56Q8IXR9 622 aa5.16□□□□□ -1.58
TRAPPC11-208ENST00000511955 CMTR1Q8N1G2 835 aaKnown RBP5.16□□□□□ -1.58
TRAPPC11-208ENST00000511955 MRPL43Q8N983 215 aaKnown RBP5.16□□□□□ -1.58
TRAPPC11-208ENST00000511955 CCDC112Q8NEF3 446 aa5.16□□□□□ -1.58
TRAPPC11-208ENST00000511955 OR52M1Q8NGK5 317 aa5.16□□□□□ -1.58
TRAPPC11-208ENST00000511955 CALML6Q8TD86 181 aa5.16□□□□□ -1.58
TRAPPC11-208ENST00000511955 HASPINQ8TF76 798 aa5.16□□□□□ -1.58
TRAPPC11-208ENST00000511955 FAM149B1Q96BN6 582 aa5.16□□□□□ -1.58
TRAPPC11-208ENST00000511955 RMDN1Q96DB5 314 aa5.16□□□□□ -1.58
TRAPPC11-208ENST00000511955 ATG4CQ96DT6 458 aa5.16□□□□□ -1.58
TRAPPC11-208ENST00000511955 KTI12Q96EK9 354 aaPredicted RBP5.16□□□□□ -1.58
TRAPPC11-208ENST00000511955 APIPQ96GX9 242 aa5.16□□□□□ -1.58
TRAPPC11-208ENST00000511955 FER1L6-AS2Q96M78 137 aa5.16□□□□□ -1.58
TRAPPC11-208ENST00000511955 AGAP2Q99490 1192 aa5.16□□□□□ -1.58
TRAPPC11-208ENST00000511955 CCT7Q99832 543 aa5.16□□□□□ -1.58
TRAPPC11-208ENST00000511955 LBHD1Q9BQE6 289 aaPredicted RBP5.16□□□□□ -1.58
TRAPPC11-208ENST00000511955 USP26Q9BXU7 913 aa5.16□□□□□ -1.58
TRAPPC11-208ENST00000511955 SLC4A5Q9BY07 1137 aa5.16□□□□□ -1.58
TRAPPC11-208ENST00000511955 ST6GALNAC4Q9H4F1 302 aa5.16□□□□□ -1.58
TRAPPC11-208ENST00000511955 MLXIPQ9HAP2 919 aa5.16□□□□□ -1.58
TRAPPC11-208ENST00000511955 ETNK1Q9HBU6 452 aa5.16□□□□□ -1.58
TRAPPC11-208ENST00000511955 VAT1LQ9HCJ6 419 aa5.16□□□□□ -1.58
TRAPPC11-208ENST00000511955 POLE3Q9NRF9 147 aa5.16□□□□□ -1.58
TRAPPC11-208ENST00000511955 DZANK1Q9NVP4 752 aa5.16□□□□□ -1.58
TRAPPC11-208ENST00000511955 DDX25Q9UHL0 483 aaKnown RBP5.16□□□□□ -1.58
TRAPPC11-208ENST00000511955 SLC27A5Q9Y2P5 690 aa5.16□□□□□ -1.58
TRAPPC11-208ENST00000511955 CLDN16Q9Y5I7 305 aa5.16□□□□□ -1.58
TRAPPC11-208ENST00000511955 CYP3A7-CYP3A51PA0A087WV96 503 aa5.15□□□□□ -1.58
TRAPPC11-208ENST00000511955 IGKV6D-41A0A0C4DH26 115 aa5.15□□□□□ -1.58
TRAPPC11-208ENST00000511955 IQANK1A0A1B0GTG1 560 aa5.15□□□□□ -1.58
TRAPPC11-208ENST00000511955 SMIM30A4D0T7 59 aa5.15□□□□□ -1.58
TRAPPC11-208ENST00000511955 ZNF263O14978 683 aa5.15□□□□□ -1.58
TRAPPC11-208ENST00000511955 XYLBO75191 536 aa5.15□□□□□ -1.58
TRAPPC11-208ENST00000511955 AKR7A3O95154 331 aa5.15□□□□□ -1.58
TRAPPC11-208ENST00000511955 METTL18O95568 372 aa5.15□□□□□ -1.58
TRAPPC11-208ENST00000511955 IL1AP01583 271 aa5.15□□□□□ -1.58
TRAPPC11-208ENST00000511955 HMGCRP04035 888 aa5.15□□□□□ -1.58
TRAPPC11-208ENST00000511955 CFHP08603 1231 aa5.15□□□□□ -1.58
TRAPPC11-208ENST00000511955 CYP3A7P24462 503 aa5.15□□□□□ -1.58
TRAPPC11-208ENST00000511955 ADCY8P40145 1251 aa5.15□□□□□ -1.58
TRAPPC11-208ENST00000511955 KCNC1P48547 511 aa5.15□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms