RNA–Protein interactions for RNA: ENST00000511944.5

NR1I3-230, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-230ENST00000511944 HLTFQ14527 1009 aaKnown RBP eCLIP9.35□□□□□ -0.91
NR1I3-230ENST00000511944 SHHQ15465 462 aa9.35□□□□□ -0.91
NR1I3-230ENST00000511944 PPM1LQ5SGD2 360 aa9.35□□□□□ -0.91
NR1I3-230ENST00000511944 C9orf50Q5SZB4 431 aa9.35□□□□□ -0.91
NR1I3-230ENST00000511944 AFMIDQ63HM1 303 aa9.35□□□□□ -0.91
NR1I3-230ENST00000511944 HEATR6Q6AI08 1181 aaKnown RBP9.35□□□□□ -0.91
NR1I3-230ENST00000511944 HIBCHQ6NVY1 386 aaPredicted RBP9.35□□□□□ -0.91
NR1I3-230ENST00000511944 DARS2Q6PI48 645 aaKnown RBP9.35□□□□□ -0.91
NR1I3-230ENST00000511944 RHBDF2Q6PJF5 856 aa9.35□□□□□ -0.91
NR1I3-230ENST00000511944 PPP1R21Q6ZMI0 780 aa9.35□□□□□ -0.91
NR1I3-230ENST00000511944 TMC8Q8IU68 726 aa9.35□□□□□ -0.91
NR1I3-230ENST00000511944 ZNF683Q8IZ20 524 aa9.35□□□□□ -0.91
NR1I3-230ENST00000511944 CNPY4Q8N129 248 aa9.35□□□□□ -0.91
NR1I3-230ENST00000511944 UMODL1-AS1Q8N2C9 162 aa9.35□□□□□ -0.91
NR1I3-230ENST00000511944 PYROXD2Q8N2H3 581 aa9.35□□□□□ -0.91
NR1I3-230ENST00000511944 RTL3Q8N8U3 475 aaKnown RBP9.35□□□□□ -0.91
NR1I3-230ENST00000511944 C1orf216Q8TAB5 229 aa9.35□□□□□ -0.91
NR1I3-230ENST00000511944 GPR152Q8TDT2 470 aa9.35□□□□□ -0.91
NR1I3-230ENST00000511944 SLC22A17Q8WUG5 538 aa9.35□□□□□ -0.91
NR1I3-230ENST00000511944 TFB1MQ8WVM0 346 aaKnown RBP9.35□□□□□ -0.91
NR1I3-230ENST00000511944 AUTS2Q8WXX7 1259 aa9.35□□□□□ -0.91
NR1I3-230ENST00000511944 MRPS31Q92665 395 aaKnown RBP9.35□□□□□ -0.91
NR1I3-230ENST00000511944 PPP2R3CQ969Q6 453 aa9.35□□□□□ -0.91
NR1I3-230ENST00000511944 PRMT1Q99873 361 aaKnown RBP9.35□□□□□ -0.91
NR1I3-230ENST00000511944 C17orf80Q9BSJ5 609 aa9.35□□□□□ -0.91
NR1I3-230ENST00000511944 TMEM121Q9BTD3 319 aa9.35□□□□□ -0.91
NR1I3-230ENST00000511944 LRRC3Q9BY71 257 aa9.35□□□□□ -0.91
NR1I3-230ENST00000511944 ZYG11BQ9C0D3 744 aa9.35□□□□□ -0.91
NR1I3-230ENST00000511944 EPC1Q9H2F5 836 aa9.35□□□□□ -0.91
NR1I3-230ENST00000511944 USP29Q9HBJ7 922 aa9.35□□□□□ -0.91
NR1I3-230ENST00000511944 ANLNQ9NQW6 1124 aa9.35□□□□□ -0.91
NR1I3-230ENST00000511944 ASAH2Q9NR71 780 aa9.35□□□□□ -0.91
NR1I3-230ENST00000511944 TMEM248Q9NWD8 314 aa9.35□□□□□ -0.91
NR1I3-230ENST00000511944 COX16Q9P0S2 106 aa9.35□□□□□ -0.91
NR1I3-230ENST00000511944 SFMBT1Q9UHJ3 866 aa9.35□□□□□ -0.91
NR1I3-230ENST00000511944 MSRAQ9UJ68 235 aa9.35□□□□□ -0.91
NR1I3-230ENST00000511944 NFU1Q9UMS0 254 aa9.35□□□□□ -0.91
NR1I3-230ENST00000511944 MAGED2Q9UNF1 606 aaPredicted RBP9.35□□□□□ -0.91
NR1I3-230ENST00000511944 PLXNA4Q9HCM2 1894 aa9.34□□□□□ -0.91
NR1I3-230ENST00000511944 CXorf51AA0A1B0GTR3 108 aa9.34□□□□□ -0.91
NR1I3-230ENST00000511944 SLC12A8A0AV02 714 aa9.34□□□□□ -0.91
NR1I3-230ENST00000511944 ESYT3A0FGR9 886 aa9.34□□□□□ -0.91
NR1I3-230ENST00000511944 ZSCAN5CA6NGD5 496 aaPredicted RBP9.34□□□□□ -0.91
NR1I3-230ENST00000511944 FAM72CH0Y354 149 aa9.34□□□□□ -0.91
NR1I3-230ENST00000511944 H7C0C1 242 aa9.34□□□□□ -0.91
NR1I3-230ENST00000511944 MSI1O43347 362 aaKnown RBP9.34□□□□□ -0.91
NR1I3-230ENST00000511944 MFSD11O43934 449 aa9.34□□□□□ -0.91
NR1I3-230ENST00000511944 PPFIA2O75334 1257 aa9.34□□□□□ -0.91
NR1I3-230ENST00000511944 MYBL2P10244 700 aa9.34□□□□□ -0.91
NR1I3-230ENST00000511944 TCF3P15923 654 aa9.34□□□□□ -0.91
NR1I3-230ENST00000511944 AMPD1P23109 780 aa9.34□□□□□ -0.91
NR1I3-230ENST00000511944 DNAJB1P25685 340 aa9.34□□□□□ -0.91
NR1I3-230ENST00000511944 FDFT1P37268 417 aa9.34□□□□□ -0.91
NR1I3-230ENST00000511944 ATP5OP48047 213 aa9.34□□□□□ -0.91
NR1I3-230ENST00000511944 YBEYP58557 167 aaPredicted RBP9.34□□□□□ -0.91
NR1I3-230ENST00000511944 GBE1Q04446 702 aa9.34□□□□□ -0.91
NR1I3-230ENST00000511944 GPS2Q13227 327 aa9.34□□□□□ -0.91
NR1I3-230ENST00000511944 GPM6BQ13491 265 aa9.34□□□□□ -0.91
NR1I3-230ENST00000511944 MS4A13Q5J8X5 152 aa9.34□□□□□ -0.91
NR1I3-230ENST00000511944 RABGAP1LQ5R372 815 aa9.34□□□□□ -0.91
NR1I3-230ENST00000511944 ARTNQ5T4W7 220 aa9.34□□□□□ -0.91
NR1I3-230ENST00000511944 CFAP58Q5T655 872 aa9.34□□□□□ -0.91
NR1I3-230ENST00000511944 TMCO4Q5TGY1 634 aa9.34□□□□□ -0.91
NR1I3-230ENST00000511944 FAM72AQ5TYM5 149 aa9.34□□□□□ -0.91
NR1I3-230ENST00000511944 PIK3R6Q5UE93 754 aa9.34□□□□□ -0.91
NR1I3-230ENST00000511944 PLPP4Q5VZY2 271 aa9.34□□□□□ -0.91
NR1I3-230ENST00000511944 ARMC3Q5W041 872 aa9.34□□□□□ -0.91
NR1I3-230ENST00000511944 ALS2CLQ60I27 953 aa9.34□□□□□ -0.91
NR1I3-230ENST00000511944 FAM72DQ6L9T8 149 aa9.34□□□□□ -0.91
NR1I3-230ENST00000511944 TIGD7Q6NT04 549 aaPredicted RBP9.34□□□□□ -0.91
NR1I3-230ENST00000511944 ZDHHC24Q6UX98 284 aa9.34□□□□□ -0.91
NR1I3-230ENST00000511944 TRMT10CQ7L0Y3 403 aaKnown RBP9.34□□□□□ -0.91
NR1I3-230ENST00000511944 TMC3Q7Z5M5 1100 aa9.34□□□□□ -0.91
NR1I3-230ENST00000511944 CROCCP2Q86T23 111 aa9.34□□□□□ -0.91
NR1I3-230ENST00000511944 TMEM150AQ86TG1 271 aa9.34□□□□□ -0.91
NR1I3-230ENST00000511944 NLRP14Q86W24 1093 aa9.34□□□□□ -0.91
NR1I3-230ENST00000511944 FAM72BQ86X60 149 aa9.34□□□□□ -0.91
NR1I3-230ENST00000511944 FAM217AQ8IXS0 508 aa9.34□□□□□ -0.91
NR1I3-230ENST00000511944 PPIL6Q8IXY8 311 aa9.34□□□□□ -0.91
NR1I3-230ENST00000511944 ZCCHC9Q8N567 271 aaKnown RBP9.34□□□□□ -0.91
NR1I3-230ENST00000511944 FBXO25Q8TCJ0 367 aa9.34□□□□□ -0.91
NR1I3-230ENST00000511944 IFT81Q8WYA0 676 aa9.34□□□□□ -0.91
NR1I3-230ENST00000511944 GTPBP3Q969Y2 492 aaKnown RBP9.34□□□□□ -0.91
NR1I3-230ENST00000511944 FUT8Q9BYC5 575 aa9.34□□□□□ -0.91
NR1I3-230ENST00000511944 NACA2Q9H009 215 aa9.34□□□□□ -0.91
NR1I3-230ENST00000511944 KLC2Q9H0B6 622 aa9.34□□□□□ -0.91
NR1I3-230ENST00000511944 CCSER2Q9H7U1 834 aa9.34□□□□□ -0.91
NR1I3-230ENST00000511944 ALG13Q9NP73 1137 aaKnown RBP9.34□□□□□ -0.91
NR1I3-230ENST00000511944 EIF2B3Q9NR50 452 aaKnown RBP9.34□□□□□ -0.91
NR1I3-230ENST00000511944 DZANK1Q9NVP4 752 aa9.34□□□□□ -0.91
NR1I3-230ENST00000511944 HAUS2Q9NVX0 235 aa9.34□□□□□ -0.91
NR1I3-230ENST00000511944 TRHDEQ9UKU6 1024 aa9.34□□□□□ -0.91
NR1I3-230ENST00000511944 TPX2Q9ULW0 747 aaKnown RBP9.34□□□□□ -0.91
NR1I3-230ENST00000511944 HEY1Q9Y5J3 304 aa9.34□□□□□ -0.91
NR1I3-230ENST00000511944 HS3ST4Q9Y661 456 aa9.34□□□□□ -0.91
NR1I3-230ENST00000511944 A0A0A0MRY4 1105 aa9.33□□□□□ -0.92
NR1I3-230ENST00000511944 ERI2A8K979 691 aaKnown RBP9.33□□□□□ -0.92
NR1I3-230ENST00000511944 HIDE1A8MVS5 230 aa9.33□□□□□ -0.92
NR1I3-230ENST00000511944 F5H5T6 163 aa9.33□□□□□ -0.92
NR1I3-230ENST00000511944 ZNF197O14709 1029 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms