RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 NSUN4Q96CB9 384 aaKnown RBP4.69□□□□□ -1.66
NIPBL-206ENST00000509429 VCPIP1Q96JH7 1222 aa4.69□□□□□ -1.66
NIPBL-206ENST00000509429 AK8Q96MA6 479 aa4.69□□□□□ -1.66
NIPBL-206ENST00000509429 FAM20AQ96MK3 541 aa4.69□□□□□ -1.66
NIPBL-206ENST00000509429 TAAR9Q96RI9 348 aa4.69□□□□□ -1.66
NIPBL-206ENST00000509429 TBCBQ99426 244 aa4.69□□□□□ -1.66
NIPBL-206ENST00000509429 NUP88Q99567 741 aaPredicted RBP4.69□□□□□ -1.66
NIPBL-206ENST00000509429 PRPF18Q99633 342 aaKnown RBP4.69□□□□□ -1.66
NIPBL-206ENST00000509429 HAUS8Q9BT25 410 aa4.69□□□□□ -1.66
NIPBL-206ENST00000509429 SPXQ9BT56 116 aa4.69□□□□□ -1.66
NIPBL-206ENST00000509429 MRM3Q9HC36 420 aaKnown RBP4.69□□□□□ -1.66
NIPBL-206ENST00000509429 HAUS2Q9NVX0 235 aa4.69□□□□□ -1.66
NIPBL-206ENST00000509429 AKAP7Q9P0M2 348 aaPredicted RBP4.69□□□□□ -1.66
NIPBL-206ENST00000509429 CD300AQ9UGN4 299 aa4.69□□□□□ -1.66
NIPBL-206ENST00000509429 ANGPTL2Q9UKU9 493 aa4.69□□□□□ -1.66
NIPBL-206ENST00000509429 SLC39A10Q9ULF5 831 aa4.69□□□□□ -1.66
NIPBL-206ENST00000509429 ERVK-19Q9WJR5 959 aa4.69□□□□□ -1.66
NIPBL-206ENST00000509429 PCDHGA2Q9Y5H1 932 aa4.69□□□□□ -1.66
NIPBL-206ENST00000509429 SPATA31E1Q6ZUB1 1445 aa4.69□□□□□ -1.66
NIPBL-206ENST00000509429 CEP170Q5SW79 1584 aa4.69□□□□□ -1.66
NIPBL-206ENST00000509429 ZNF335Q9H4Z2 1342 aaPredicted RBP4.69□□□□□ -1.66
NIPBL-206ENST00000509429 RPAP1Q9BWH6 1393 aaPredicted RBP4.68□□□□□ -1.66
NIPBL-206ENST00000509429 A0A087WUV0 522 aaPredicted RBP4.68□□□□□ -1.66
NIPBL-206ENST00000509429 GOLGA8JA6NMD2 632 aa4.68□□□□□ -1.66
NIPBL-206ENST00000509429 HSBP1L1C9JCN9 74 aa4.68□□□□□ -1.66
NIPBL-206ENST00000509429 E7EVH7 732 aa4.68□□□□□ -1.66
NIPBL-206ENST00000509429 GOLGA8TH3BQL2 631 aa4.68□□□□□ -1.66
NIPBL-206ENST00000509429 PER2O15055 1255 aa4.68□□□□□ -1.66
NIPBL-206ENST00000509429 CASC3O15234 703 aaKnown RBP4.68□□□□□ -1.66
NIPBL-206ENST00000509429 DAPK3O43293 454 aa4.68□□□□□ -1.66
NIPBL-206ENST00000509429 SYNCRIPO60506 623 aaKnown RBP4.68□□□□□ -1.66
NIPBL-206ENST00000509429 CCNT1O60563 726 aaKnown RBP4.68□□□□□ -1.66
NIPBL-206ENST00000509429 PEX11AO75192 247 aa4.68□□□□□ -1.66
NIPBL-206ENST00000509429 FRAT2O75474 233 aaPredicted RBP4.68□□□□□ -1.66
NIPBL-206ENST00000509429 IDH1O75874 414 aaKnown RBP4.68□□□□□ -1.66
NIPBL-206ENST00000509429 TMCC1O94876 653 aa4.68□□□□□ -1.66
NIPBL-206ENST00000509429 FSBPO95073 299 aa4.68□□□□□ -1.66
NIPBL-206ENST00000509429 CRTAMO95727 393 aa4.68□□□□□ -1.66
NIPBL-206ENST00000509429 CSTBP04080 98 aaKnown RBP4.68□□□□□ -1.66
NIPBL-206ENST00000509429 URODP06132 367 aa4.68□□□□□ -1.66
NIPBL-206ENST00000509429 IVLP07476 585 aa4.68□□□□□ -1.66
NIPBL-206ENST00000509429 ASNSP08243 561 aa4.68□□□□□ -1.66
NIPBL-206ENST00000509429 WEE2P0C1S8 567 aa4.68□□□□□ -1.66
NIPBL-206ENST00000509429 GOLGA8HP0CJ92 632 aa4.68□□□□□ -1.66
NIPBL-206ENST00000509429 CKMT1AP12532 417 aa4.68□□□□□ -1.66
NIPBL-206ENST00000509429 RARGP13631 454 aa4.68□□□□□ -1.66
NIPBL-206ENST00000509429 DDX5P17844 614 aaKnown RBP4.68□□□□□ -1.66
NIPBL-206ENST00000509429 SDSP20132 328 aa4.68□□□□□ -1.66
NIPBL-206ENST00000509429 CASTP20810 708 aaKnown RBP4.68□□□□□ -1.66
NIPBL-206ENST00000509429 GALP22466 123 aa4.68□□□□□ -1.66
NIPBL-206ENST00000509429 U2AF2P26368 475 aaKnown RBP eCLIP4.68□□□□□ -1.66
NIPBL-206ENST00000509429 RFC1P35251 1148 aaPredicted RBP4.68□□□□□ -1.66
NIPBL-206ENST00000509429 BCL6P41182 706 aa4.68□□□□□ -1.66
NIPBL-206ENST00000509429 HTR2BP41595 481 aa4.68□□□□□ -1.66
NIPBL-206ENST00000509429 ETV4P43268 484 aa4.68□□□□□ -1.66
NIPBL-206ENST00000509429 HSPA13P48723 471 aa4.68□□□□□ -1.66
NIPBL-206ENST00000509429 POU3F4P49335 361 aa4.68□□□□□ -1.66
NIPBL-206ENST00000509429 SERPINB8P50452 374 aa4.68□□□□□ -1.66
NIPBL-206ENST00000509429 KRT17Q04695 432 aa4.68□□□□□ -1.66
NIPBL-206ENST00000509429 DYNC1I2Q13409 638 aaKnown RBP4.68□□□□□ -1.66
NIPBL-206ENST00000509429 RIPK1Q13546 671 aa4.68□□□□□ -1.66
NIPBL-206ENST00000509429 CAMK2DQ13557 499 aa4.68□□□□□ -1.66
NIPBL-206ENST00000509429 EFR3AQ14156 821 aa4.68□□□□□ -1.66
NIPBL-206ENST00000509429 ERV3-1Q14264 604 aa4.68□□□□□ -1.66
NIPBL-206ENST00000509429 HABP2Q14520 560 aaPredicted RBP4.68□□□□□ -1.66
NIPBL-206ENST00000509429 RFTN1Q14699 578 aaPredicted RBP4.68□□□□□ -1.66
NIPBL-206ENST00000509429 CASP8Q14790 479 aa4.68□□□□□ -1.66
NIPBL-206ENST00000509429 ADIPOQQ15848 244 aa4.68□□□□□ -1.66
NIPBL-206ENST00000509429 NDUFA5Q16718 116 aa4.68□□□□□ -1.66
NIPBL-206ENST00000509429 FNDC3BQ53EP0 1204 aaKnown RBP4.68□□□□□ -1.66
NIPBL-206ENST00000509429 PPP6R3Q5H9R7 873 aaPredicted RBP4.68□□□□□ -1.66
NIPBL-206ENST00000509429 TEX35Q5T0J7 233 aa4.68□□□□□ -1.66
NIPBL-206ENST00000509429 WLSQ5T9L3 541 aa4.68□□□□□ -1.66
NIPBL-206ENST00000509429 VWA5B1Q5TIE3 1220 aa4.68□□□□□ -1.66
NIPBL-206ENST00000509429 IQSEC1Q6DN90 963 aa4.68□□□□□ -1.66
NIPBL-206ENST00000509429 PGM2L1Q6PCE3 622 aa4.68□□□□□ -1.66
NIPBL-206ENST00000509429 TRIM65Q6PJ69 517 aa4.68□□□□□ -1.66
NIPBL-206ENST00000509429 CATSPERGQ6ZRH7 1159 aa4.68□□□□□ -1.66
NIPBL-206ENST00000509429 PIWIL3Q7Z3Z3 882 aaKnown RBP4.68□□□□□ -1.66
NIPBL-206ENST00000509429 R3HCC1LQ7Z5L2 792 aaKnown RBP4.68□□□□□ -1.66
NIPBL-206ENST00000509429 SLFN11Q7Z7L1 901 aa4.68□□□□□ -1.66
NIPBL-206ENST00000509429 TRIM48Q8IWZ4 208 aa4.68□□□□□ -1.66
NIPBL-206ENST00000509429 MCEMP1Q8IX19 187 aa4.68□□□□□ -1.66
NIPBL-206ENST00000509429 THNSL1Q8IYQ7 743 aa4.68□□□□□ -1.66
NIPBL-206ENST00000509429 CMTR2Q8IYT2 770 aaKnown RBP4.68□□□□□ -1.66
NIPBL-206ENST00000509429 EFHBQ8N7U6 833 aa4.68□□□□□ -1.66
NIPBL-206ENST00000509429 SIMC1Q8NDZ2 872 aa4.68□□□□□ -1.66
NIPBL-206ENST00000509429 HIPK4Q8NE63 616 aa4.68□□□□□ -1.66
NIPBL-206ENST00000509429 LINS1Q8NG48 757 aa4.68□□□□□ -1.66
NIPBL-206ENST00000509429 PHOSPHO2Q8TCD6 241 aa4.68□□□□□ -1.66
NIPBL-206ENST00000509429 GRK7Q8WTQ7 553 aa4.68□□□□□ -1.66
NIPBL-206ENST00000509429 METTL21AQ8WXB1 218 aa4.68□□□□□ -1.66
NIPBL-206ENST00000509429 STARD8Q92502 1023 aa4.68□□□□□ -1.66
NIPBL-206ENST00000509429 TMA16Q96EY4 203 aaKnown RBP4.68□□□□□ -1.66
NIPBL-206ENST00000509429 FUBP3Q96I24 572 aaKnown RBP eCLIP4.68□□□□□ -1.66
NIPBL-206ENST00000509429 RPGRIP1Q96KN7 1286 aa4.68□□□□□ -1.66
NIPBL-206ENST00000509429 EXOC2Q96KP1 924 aa4.68□□□□□ -1.66
NIPBL-206ENST00000509429 IFT74Q96LB3 600 aa4.68□□□□□ -1.66
NIPBL-206ENST00000509429 C7orf26Q96N11 449 aa4.68□□□□□ -1.66
NIPBL-206ENST00000509429 CIB1Q99828 191 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms