RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 PAGE1O75459 146 aa11.24□□□□□ -0.61
RNF4-212ENST00000509258 FSBPO95073 299 aa11.24□□□□□ -0.61
RNF4-212ENST00000509258 GJB6O95452 261 aa11.24□□□□□ -0.61
RNF4-212ENST00000509258 GLI1P08151 1106 aa11.24□□□□□ -0.61
RNF4-212ENST00000509258 FLT3P36888 993 aa11.24□□□□□ -0.61
RNF4-212ENST00000509258 NNMTP40261 264 aa11.24□□□□□ -0.61
RNF4-212ENST00000509258 RNASE9P60153 205 aaKnown RBP11.24□□□□□ -0.61
RNF4-212ENST00000509258 CDK17Q00537 523 aa11.24□□□□□ -0.61
RNF4-212ENST00000509258 CDH18Q13634 790 aa11.24□□□□□ -0.61
RNF4-212ENST00000509258 AUHQ13825 339 aaKnown RBP11.24□□□□□ -0.61
RNF4-212ENST00000509258 COL28A1Q2UY09 1125 aa11.24□□□□□ -0.61
RNF4-212ENST00000509258 HNRNPA1L2Q32P51 320 aaKnown RBP11.24□□□□□ -0.61
RNF4-212ENST00000509258 ALFQ53S48 1182 aa11.24□□□□□ -0.61
RNF4-212ENST00000509258 RNF219Q5W0B1 726 aaPredicted RBP11.24□□□□□ -0.61
RNF4-212ENST00000509258 C19orf48Q6RUI8 117 aa11.24□□□□□ -0.61
RNF4-212ENST00000509258 USP30Q70CQ3 517 aa11.24□□□□□ -0.61
RNF4-212ENST00000509258 PHLDB2Q86SQ0 1253 aa11.24□□□□□ -0.61
RNF4-212ENST00000509258 PDZD3Q86UT5 571 aa11.24□□□□□ -0.61
RNF4-212ENST00000509258 FAM114A1Q8IWE2 563 aa11.24□□□□□ -0.61
RNF4-212ENST00000509258 STK40Q8N2I9 435 aa11.24□□□□□ -0.61
RNF4-212ENST00000509258 KDM1BQ8NB78 822 aa11.24□□□□□ -0.61
RNF4-212ENST00000509258 ZNF397Q8NF99 534 aaPredicted RBP11.24□□□□□ -0.61
RNF4-212ENST00000509258 EPS8L1Q8TE68 723 aa11.24□□□□□ -0.61
RNF4-212ENST00000509258 GANCQ8TET4 914 aa11.24□□□□□ -0.61
RNF4-212ENST00000509258 PTPRN2Q92932 1015 aa11.24□□□□□ -0.61
RNF4-212ENST00000509258 FAM81BQ96LP2 452 aa11.24□□□□□ -0.61
RNF4-212ENST00000509258 TBCBQ99426 244 aa11.24□□□□□ -0.61
RNF4-212ENST00000509258 MAGEB5Q9BZ81 275 aa11.24□□□□□ -0.61
RNF4-212ENST00000509258 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.24□□□□□ -0.61
RNF4-212ENST00000509258 SLC12A6Q9UHW9 1150 aa11.24□□□□□ -0.61
RNF4-212ENST00000509258 NOCTQ9UK39 431 aaKnown RBP11.24□□□□□ -0.61
RNF4-212ENST00000509258 VANGL2Q9ULK5 521 aa11.24□□□□□ -0.61
RNF4-212ENST00000509258 BTBD3Q9Y2F9 522 aa11.24□□□□□ -0.61
RNF4-212ENST00000509258 SIK3Q9Y2K2 1263 aa11.24□□□□□ -0.61
RNF4-212ENST00000509258 RAXQ9Y2V3 346 aa11.24□□□□□ -0.61
RNF4-212ENST00000509258 OR51B4Q9Y5P0 310 aa11.24□□□□□ -0.61
RNF4-212ENST00000509258 IGSF10Q6WRI0 2623 aa11.24□□□□□ -0.61
RNF4-212ENST00000509258 ITIH6Q6UXX5 1313 aa11.24□□□□□ -0.61
RNF4-212ENST00000509258 MYLKQ15746 1914 aa11.23□□□□□ -0.61
RNF4-212ENST00000509258 LRRK1Q38SD2 2015 aa11.23□□□□□ -0.61
RNF4-212ENST00000509258 LOC400499M0QZD8 3231 aa11.23□□□□□ -0.61
RNF4-212ENST00000509258 GOLGA8CPA6NN73 597 aa11.23□□□□□ -0.61
RNF4-212ENST00000509258 F5H5T6 163 aa11.23□□□□□ -0.61
RNF4-212ENST00000509258 M0QYT0 321 aa11.23□□□□□ -0.61
RNF4-212ENST00000509258 PES1O00541 588 aaKnown RBP11.23□□□□□ -0.61
RNF4-212ENST00000509258 KCNK3O14649 394 aa11.23□□□□□ -0.61
RNF4-212ENST00000509258 WNT9AO14904 365 aa11.23□□□□□ -0.61
RNF4-212ENST00000509258 IGHV4-34P06331 123 aa11.23□□□□□ -0.61
RNF4-212ENST00000509258 KRT9P35527 623 aa11.23□□□□□ -0.61
RNF4-212ENST00000509258 GABRB2P47870 512 aa11.23□□□□□ -0.61
RNF4-212ENST00000509258 C21orf59P57076 290 aa11.23□□□□□ -0.61
RNF4-212ENST00000509258 JAM2P57087 298 aa11.23□□□□□ -0.61
RNF4-212ENST00000509258 RACK1P63244 317 aaKnown RBP11.23□□□□□ -0.61
RNF4-212ENST00000509258 NOMO3P69849 1222 aa11.23□□□□□ -0.61
RNF4-212ENST00000509258 MTA1Q13330 715 aa11.23□□□□□ -0.61
RNF4-212ENST00000509258 EFHC1Q5JVL4 640 aa11.23□□□□□ -0.61
RNF4-212ENST00000509258 KIAA0895LQ68EN5 471 aa11.23□□□□□ -0.61
RNF4-212ENST00000509258 APTXQ7Z2E3 356 aaKnown RBP11.23□□□□□ -0.61
RNF4-212ENST00000509258 BNIPLQ7Z465 357 aa11.23□□□□□ -0.61
RNF4-212ENST00000509258 MMAAQ8IVH4 418 aaKnown RBP11.23□□□□□ -0.61
RNF4-212ENST00000509258 PIAS4Q8N2W9 510 aaPredicted RBP11.23□□□□□ -0.61
RNF4-212ENST00000509258 AADATQ8N5Z0 425 aa11.23□□□□□ -0.61
RNF4-212ENST00000509258 ATP6V0D2Q8N8Y2 350 aa11.23□□□□□ -0.61
RNF4-212ENST00000509258 ENOX1Q8TC92 643 aaKnown RBP11.23□□□□□ -0.61
RNF4-212ENST00000509258 FRS2Q8WU20 508 aa11.23□□□□□ -0.61
RNF4-212ENST00000509258 CPA5Q8WXQ8 436 aa11.23□□□□□ -0.61
RNF4-212ENST00000509258 NT5C3BQ969T7 300 aa11.23□□□□□ -0.61
RNF4-212ENST00000509258 PPP1R9BQ96SB3 815 aa11.23□□□□□ -0.61
RNF4-212ENST00000509258 PSMB7Q99436 277 aa11.23□□□□□ -0.61
RNF4-212ENST00000509258 ACE2Q9BYF1 805 aaPredicted RBP11.23□□□□□ -0.61
RNF4-212ENST00000509258 PABPC3Q9H361 631 aaKnown RBP11.23□□□□□ -0.61
RNF4-212ENST00000509258 SCUBE2Q9NQ36 999 aa11.23□□□□□ -0.61
RNF4-212ENST00000509258 FANCLQ9NW38 375 aa11.23□□□□□ -0.61
RNF4-212ENST00000509258 FTSJ1Q9UET6 329 aa11.23□□□□□ -0.61
RNF4-212ENST00000509258 CEP83Q9Y592 693 aa11.23□□□□□ -0.61
RNF4-212ENST00000509258 A0A1W2PP55 124 aa11.22□□□□□ -0.61
RNF4-212ENST00000509258 TARSL2A2RTX5 802 aaKnown RBP11.22□□□□□ -0.61
RNF4-212ENST00000509258 LRRC72A6NJI9 287 aa11.22□□□□□ -0.61
RNF4-212ENST00000509258 ANKRD36A6QL64 1941 aa11.22□□□□□ -0.61
RNF4-212ENST00000509258 H0Y8X5 98 aa11.22□□□□□ -0.61
RNF4-212ENST00000509258 GOLGA8SH3BPF8 625 aa11.22□□□□□ -0.61
RNF4-212ENST00000509258 VILLO15195 856 aa11.22□□□□□ -0.61
RNF4-212ENST00000509258 GFPT2O94808 682 aa11.22□□□□□ -0.61
RNF4-212ENST00000509258 SRPRAP08240 638 aaKnown RBP11.22□□□□□ -0.61
RNF4-212ENST00000509258 EEF1GP26641 437 aaKnown RBP11.22□□□□□ -0.61
RNF4-212ENST00000509258 CCR1P32246 355 aa11.22□□□□□ -0.61
RNF4-212ENST00000509258 NOS2P35228 1153 aa11.22□□□□□ -0.61
RNF4-212ENST00000509258 ANP32AP39687 249 aaKnown RBP11.22□□□□□ -0.61
RNF4-212ENST00000509258 CTSKP43235 329 aa11.22□□□□□ -0.61
RNF4-212ENST00000509258 PSMD8P48556 350 aa11.22□□□□□ -0.61
RNF4-212ENST00000509258 CXCR3P49682 368 aa11.22□□□□□ -0.61
RNF4-212ENST00000509258 SULT1E1P49888 294 aa11.22□□□□□ -0.61
RNF4-212ENST00000509258 OXCT1P55809 520 aa11.22□□□□□ -0.61
RNF4-212ENST00000509258 ADAMTS20P59510 1910 aa11.22□□□□□ -0.61
RNF4-212ENST00000509258 ECT2LQ008S8 904 aa11.22□□□□□ -0.61
RNF4-212ENST00000509258 FMO1Q01740 532 aa11.22□□□□□ -0.61
RNF4-212ENST00000509258 ARID5BQ14865 1188 aa11.22□□□□□ -0.61
RNF4-212ENST00000509258 NCAPHQ15003 741 aa11.22□□□□□ -0.61
RNF4-212ENST00000509258 SMAD1Q15797 465 aaKnown RBP11.22□□□□□ -0.61
RNF4-212ENST00000509258 C5orf22Q49AR2 442 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms