RNA–Protein interactions for RNA: ENST00000508559.1

BRCC3P1-201, Transcript of BRCA1/BRCA2-containing complex subunit 3 pseudogene 1, humanhuman

BASIC

Gene BRCC3P1, Length 951 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P1-201ENST00000508559 BYSLQ13895 437 aaKnown RBP11.29□□□□□ -0.6
BRCC3P1-201ENST00000508559 NOMO1Q15155 1222 aa11.29□□□□□ -0.6
BRCC3P1-201ENST00000508559 CCNG2Q16589 344 aa11.29□□□□□ -0.6
BRCC3P1-201ENST00000508559 KLHL7Q8IXQ5 586 aa11.29□□□□□ -0.6
BRCC3P1-201ENST00000508559 NPWQ8N729 165 aa11.29□□□□□ -0.6
BRCC3P1-201ENST00000508559 OR7D4Q8NG98 312 aa11.29□□□□□ -0.6
BRCC3P1-201ENST00000508559 WFIKKN2Q8TEU8 576 aa11.29□□□□□ -0.6
BRCC3P1-201ENST00000508559 GRK7Q8WTQ7 553 aa11.29□□□□□ -0.6
BRCC3P1-201ENST00000508559 DNASE1L2Q92874 299 aa11.29□□□□□ -0.6
BRCC3P1-201ENST00000508559 RUNDC3BQ96NL0 473 aa11.29□□□□□ -0.6
BRCC3P1-201ENST00000508559 C8orf33Q9H7E9 229 aaPredicted RBP11.29□□□□□ -0.6
BRCC3P1-201ENST00000508559 NDFIP2Q9NV92 336 aa11.29□□□□□ -0.6
BRCC3P1-201ENST00000508559 HAUS2Q9NVX0 235 aa11.29□□□□□ -0.6
BRCC3P1-201ENST00000508559 FEZ2Q9UHY8 353 aaPredicted RBP11.29□□□□□ -0.6
BRCC3P1-201ENST00000508559 IPO11Q9UI26 975 aaKnown RBP11.29□□□□□ -0.6
BRCC3P1-201ENST00000508559 GGA2Q9UJY4 613 aa11.29□□□□□ -0.6
BRCC3P1-201ENST00000508559 R3HDM2Q9Y2K5 976 aaKnown RBP11.29□□□□□ -0.6
BRCC3P1-201ENST00000508559 CFAP69A5D8W1 941 aa11.28□□□□□ -0.6
BRCC3P1-201ENST00000508559 TBC1D3BA6NDS4 549 aa11.28□□□□□ -0.6
BRCC3P1-201ENST00000508559 SGK1O00141 431 aa11.28□□□□□ -0.6
BRCC3P1-201ENST00000508559 PDE2AO00408 941 aaPredicted RBP11.28□□□□□ -0.6
BRCC3P1-201ENST00000508559 MTSS1O43312 755 aa11.28□□□□□ -0.6
BRCC3P1-201ENST00000508559 LIASO43766 372 aa11.28□□□□□ -0.6
BRCC3P1-201ENST00000508559 PHF2O75151 1096 aa11.28□□□□□ -0.6
BRCC3P1-201ENST00000508559 TULP3O75386 442 aa11.28□□□□□ -0.6
BRCC3P1-201ENST00000508559 APODP05090 189 aa11.28□□□□□ -0.6
BRCC3P1-201ENST00000508559 SRFP11831 508 aa11.28□□□□□ -0.6
BRCC3P1-201ENST00000508559 PABPC1P11940 636 aaKnown RBP11.28□□□□□ -0.6
BRCC3P1-201ENST00000508559 MZF1P28698 734 aaPredicted RBP11.28□□□□□ -0.6
BRCC3P1-201ENST00000508559 CHRNA3P32297 505 aa11.28□□□□□ -0.6
BRCC3P1-201ENST00000508559 GJA4P35212 333 aa11.28□□□□□ -0.6
BRCC3P1-201ENST00000508559 ACVRL1P37023 503 aa11.28□□□□□ -0.6
BRCC3P1-201ENST00000508559 GARSP41250 739 aaKnown RBP11.28□□□□□ -0.6
BRCC3P1-201ENST00000508559 GEMIN4P57678 1058 aaKnown RBP11.28□□□□□ -0.6
BRCC3P1-201ENST00000508559 ZP2Q05996 745 aa11.28□□□□□ -0.6
BRCC3P1-201ENST00000508559 C2orf54Q08AI8 447 aa11.28□□□□□ -0.6
BRCC3P1-201ENST00000508559 GALNT2Q10471 571 aa11.28□□□□□ -0.6
BRCC3P1-201ENST00000508559 SLC10A2Q12908 348 aaPredicted RBP11.28□□□□□ -0.6
BRCC3P1-201ENST00000508559 XRCC4Q13426 336 aa11.28□□□□□ -0.6
BRCC3P1-201ENST00000508559 SERINC3Q13530 473 aa11.28□□□□□ -0.6
BRCC3P1-201ENST00000508559 DMC1Q14565 340 aa11.28□□□□□ -0.6
BRCC3P1-201ENST00000508559 SLC45A4Q5BKX6 768 aa11.28□□□□□ -0.6
BRCC3P1-201ENST00000508559 FSCBQ5H9T9 825 aa11.28□□□□□ -0.6
BRCC3P1-201ENST00000508559 HEATR6Q6AI08 1181 aaKnown RBP11.28□□□□□ -0.6
BRCC3P1-201ENST00000508559 CXorf57Q6NSI4 855 aaKnown RBP11.28□□□□□ -0.6
BRCC3P1-201ENST00000508559 TIGD7Q6NT04 549 aaPredicted RBP11.28□□□□□ -0.6
BRCC3P1-201ENST00000508559 CCDC13Q8IYE1 715 aa11.28□□□□□ -0.6
BRCC3P1-201ENST00000508559 BBS5Q8N3I7 341 aa11.28□□□□□ -0.6
BRCC3P1-201ENST00000508559 PRELID2Q8N945 189 aa11.28□□□□□ -0.6
BRCC3P1-201ENST00000508559 CCDC89Q8N998 374 aa11.28□□□□□ -0.6
BRCC3P1-201ENST00000508559 SPATA4Q8NEY3 305 aa11.28□□□□□ -0.6
BRCC3P1-201ENST00000508559 CCDC26Q8TAB7 109 aa11.28□□□□□ -0.6
BRCC3P1-201ENST00000508559 WFDC5Q8TCV5 224 aa11.28□□□□□ -0.6
BRCC3P1-201ENST00000508559 UCMAQ8WVF2 138 aa11.28□□□□□ -0.6
BRCC3P1-201ENST00000508559 ARHGEF2Q92974 986 aaKnown RBP11.28□□□□□ -0.6
BRCC3P1-201ENST00000508559 ASB2Q96Q27 587 aa11.28□□□□□ -0.6
BRCC3P1-201ENST00000508559 PNKPQ96T60 521 aa11.28□□□□□ -0.6
BRCC3P1-201ENST00000508559 LGMNQ99538 433 aa11.28□□□□□ -0.6
BRCC3P1-201ENST00000508559 FEM1AQ9BSK4 669 aa11.28□□□□□ -0.6
BRCC3P1-201ENST00000508559 CARD6Q9BX69 1037 aa11.28□□□□□ -0.6
BRCC3P1-201ENST00000508559 CIPCQ9C0C6 399 aa11.28□□□□□ -0.6
BRCC3P1-201ENST00000508559 LRRC19Q9H756 370 aa11.28□□□□□ -0.6
BRCC3P1-201ENST00000508559 SLC25A13Q9UJS0 675 aa11.28□□□□□ -0.6
BRCC3P1-201ENST00000508559 FBXL21Q9UKT6 434 aa11.28□□□□□ -0.6
BRCC3P1-201ENST00000508559 DNPEPQ9ULA0 475 aa11.28□□□□□ -0.6
BRCC3P1-201ENST00000508559 PIAS3Q9Y6X2 628 aa11.28□□□□□ -0.6
BRCC3P1-201ENST00000508559 SZT2Q5T011 3432 aa11.28□□□□□ -0.6
BRCC3P1-201ENST00000508559 A0A0D9SEW6 157 aa11.27□□□□□ -0.61
BRCC3P1-201ENST00000508559 ZSCAN5CA6NGD5 496 aaPredicted RBP11.27□□□□□ -0.61
BRCC3P1-201ENST00000508559 KCNN4O15554 427 aa11.27□□□□□ -0.61
BRCC3P1-201ENST00000508559 GAS8O95995 478 aa11.27□□□□□ -0.61
BRCC3P1-201ENST00000508559 IFNB1P01574 187 aa11.27□□□□□ -0.61
BRCC3P1-201ENST00000508559 ATP5BP06576 529 aaKnown RBP11.27□□□□□ -0.61
BRCC3P1-201ENST00000508559 CCNCP24863 283 aa11.27□□□□□ -0.61
BRCC3P1-201ENST00000508559 CD70P32970 193 aa11.27□□□□□ -0.61
BRCC3P1-201ENST00000508559 COILP38432 576 aaPredicted RBP11.27□□□□□ -0.61
BRCC3P1-201ENST00000508559 NNMTP40261 264 aa11.27□□□□□ -0.61
BRCC3P1-201ENST00000508559 SLC6A11P48066 632 aa11.27□□□□□ -0.61
BRCC3P1-201ENST00000508559 SOX9P48436 509 aa11.27□□□□□ -0.61
BRCC3P1-201ENST00000508559 ST8SIA6P61647 398 aa11.27□□□□□ -0.61
BRCC3P1-201ENST00000508559 SULT2A1Q06520 285 aa11.27□□□□□ -0.61
BRCC3P1-201ENST00000508559 E2F5Q15329 346 aa11.27□□□□□ -0.61
BRCC3P1-201ENST00000508559 PPP1R7Q15435 360 aa11.27□□□□□ -0.61
BRCC3P1-201ENST00000508559 PLEKHG6Q3KR16 790 aa11.27□□□□□ -0.61
BRCC3P1-201ENST00000508559 PITRM1Q5JRX3 1037 aa11.27□□□□□ -0.61
BRCC3P1-201ENST00000508559 AFMIDQ63HM1 303 aa11.27□□□□□ -0.61
BRCC3P1-201ENST00000508559 RETSATQ6NUM9 610 aa11.27□□□□□ -0.61
BRCC3P1-201ENST00000508559 CCDC137Q6PK04 289 aaKnown RBP11.27□□□□□ -0.61
BRCC3P1-201ENST00000508559 LEKR1Q6ZMV7 388 aa11.27□□□□□ -0.61
BRCC3P1-201ENST00000508559 B4GALNT4Q76KP1 1039 aa11.27□□□□□ -0.61
BRCC3P1-201ENST00000508559 ARHGAP12Q8IWW6 846 aa11.27□□□□□ -0.61
BRCC3P1-201ENST00000508559 AHI1Q8N157 1196 aa11.27□□□□□ -0.61
BRCC3P1-201ENST00000508559 ATL2Q8NHH9 583 aa11.27□□□□□ -0.61
BRCC3P1-201ENST00000508559 QKIQ96PU8 341 aaKnown RBP eCLIP11.27□□□□□ -0.61
BRCC3P1-201ENST00000508559 KRT12Q99456 494 aa11.27□□□□□ -0.61
BRCC3P1-201ENST00000508559 P2RY13Q9BPV8 354 aa11.27□□□□□ -0.61
BRCC3P1-201ENST00000508559 DDX47Q9H0S4 455 aaKnown RBP11.27□□□□□ -0.61
BRCC3P1-201ENST00000508559 RBM12Q9NTZ6 932 aaKnown RBP11.27□□□□□ -0.61
BRCC3P1-201ENST00000508559 UBA2Q9UBT2 640 aaPredicted RBP11.27□□□□□ -0.61
BRCC3P1-201ENST00000508559 ZNF212Q9UDV6 495 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms