RNA–Protein interactions for RNA: ENST00000508167.5

PROM1-207, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-207ENST00000508167 CCDC114Q96M63 670 aa11.28□□□□□ -0.6
PROM1-207ENST00000508167 KCTD15Q96SI1 283 aaPredicted RBP11.28□□□□□ -0.6
PROM1-207ENST00000508167 MUC3BQ9H195 1237 aa11.28□□□□□ -0.6
PROM1-207ENST00000508167 EBF3Q9H4W6 596 aa11.28□□□□□ -0.6
PROM1-207ENST00000508167 PCDH18Q9HCL0 1135 aa11.28□□□□□ -0.6
PROM1-207ENST00000508167 E9PAM4 449 aa11.28□□□□□ -0.6
PROM1-207ENST00000508167 STK25O00506 426 aa11.28□□□□□ -0.6
PROM1-207ENST00000508167 MBTPS2O43462 519 aa11.28□□□□□ -0.6
PROM1-207ENST00000508167 MOSPD3O75425 235 aa11.28□□□□□ -0.6
PROM1-207ENST00000508167 POU2F2P09086 479 aa11.28□□□□□ -0.6
PROM1-207ENST00000508167 MLLT6P55198 1093 aaPredicted RBP11.28□□□□□ -0.6
PROM1-207ENST00000508167 PPP2R2AP63151 447 aa11.28□□□□□ -0.6
PROM1-207ENST00000508167 MS4A13Q5J8X5 152 aa11.28□□□□□ -0.6
PROM1-207ENST00000508167 TRIM68Q6AZZ1 485 aa11.28□□□□□ -0.6
PROM1-207ENST00000508167 PLCD3Q8N3E9 789 aa11.28□□□□□ -0.6
PROM1-207ENST00000508167 ZCCHC9Q8N567 271 aaKnown RBP11.28□□□□□ -0.6
PROM1-207ENST00000508167 MDM1Q8TC05 714 aa11.28□□□□□ -0.6
PROM1-207ENST00000508167 TEKT4Q8WW24 435 aa11.28□□□□□ -0.6
PROM1-207ENST00000508167 P3H4Q92791 437 aa11.28□□□□□ -0.6
PROM1-207ENST00000508167 NT5C3BQ969T7 300 aa11.28□□□□□ -0.6
PROM1-207ENST00000508167 FAF2Q96CS3 445 aa11.28□□□□□ -0.6
PROM1-207ENST00000508167 ASB16Q96NS5 453 aa11.28□□□□□ -0.6
PROM1-207ENST00000508167 HAPLN3Q96S86 360 aa11.28□□□□□ -0.6
PROM1-207ENST00000508167 S1PR5Q9H228 398 aa11.28□□□□□ -0.6
PROM1-207ENST00000508167 LINC00597Q9H2U6 94 aa11.28□□□□□ -0.6
PROM1-207ENST00000508167 PRDM6Q9NQX0 595 aa11.28□□□□□ -0.6
PROM1-207ENST00000508167 LGALS13Q9UHV8 139 aa11.28□□□□□ -0.6
PROM1-207ENST00000508167 NOVA2Q9UNW9 492 aaKnown RBP11.28□□□□□ -0.6
PROM1-207ENST00000508167 E2F8A0AVK6 867 aa11.28□□□□□ -0.6
PROM1-207ENST00000508167 NRLP54845 237 aa11.28□□□□□ -0.6
PROM1-207ENST00000508167 TRIP13Q15645 432 aaPredicted RBP11.28□□□□□ -0.6
PROM1-207ENST00000508167 MSS51Q4VC12 460 aa11.28□□□□□ -0.6
PROM1-207ENST00000508167 FBXL22Q6P050 247 aa11.28□□□□□ -0.6
PROM1-207ENST00000508167 MFN1Q8IWA4 741 aa11.28□□□□□ -0.6
PROM1-207ENST00000508167 MZB1Q8WU39 189 aa11.28□□□□□ -0.6
PROM1-207ENST00000508167 CENPTQ96BT3 561 aa11.28□□□□□ -0.6
PROM1-207ENST00000508167 CELF6Q96J87 481 aaKnown RBP11.28□□□□□ -0.6
PROM1-207ENST00000508167 ZYG11BQ9C0D3 744 aa11.28□□□□□ -0.6
PROM1-207ENST00000508167 SEPT10Q9P0V9 454 aa11.28□□□□□ -0.6
PROM1-207ENST00000508167 ZFP37Q9Y6Q3 630 aaPredicted RBP11.28□□□□□ -0.6
PROM1-207ENST00000508167 NRG2O14511 850 aaPredicted RBP11.27□□□□□ -0.6
PROM1-207ENST00000508167 TTC4O95801 387 aa11.27□□□□□ -0.6
PROM1-207ENST00000508167 KLKB1P03952 638 aa11.27□□□□□ -0.6
PROM1-207ENST00000508167 SERPINB6P35237 376 aa11.27□□□□□ -0.6
PROM1-207ENST00000508167 IL31Q6EBC2 164 aa11.27□□□□□ -0.6
PROM1-207ENST00000508167 RFX8Q6ZV50 586 aa11.27□□□□□ -0.6
PROM1-207ENST00000508167 BBS12Q6ZW61 710 aa11.27□□□□□ -0.6
PROM1-207ENST00000508167 TRMT10CQ7L0Y3 403 aaKnown RBP11.27□□□□□ -0.6
PROM1-207ENST00000508167 HJURPQ8NCD3 748 aaPredicted RBP11.27□□□□□ -0.6
PROM1-207ENST00000508167 NSMCE1Q8WV22 266 aa11.27□□□□□ -0.6
PROM1-207ENST00000508167 PRCCQ92733 491 aaPredicted RBP11.27□□□□□ -0.6
PROM1-207ENST00000508167 WBP2Q969T9 261 aa11.27□□□□□ -0.6
PROM1-207ENST00000508167 E2F7Q96AV8 911 aa11.27□□□□□ -0.6
PROM1-207ENST00000508167 MSLNLQ96KJ4 702 aa11.27□□□□□ -0.6
PROM1-207ENST00000508167 C10orf88Q9H8K7 445 aa11.27□□□□□ -0.6
PROM1-207ENST00000508167 THEGQ9P2T0 379 aa11.27□□□□□ -0.6
PROM1-207ENST00000508167 CHD9Q3L8U1 2897 aa11.27□□□□□ -0.6
PROM1-207ENST00000508167 TCRBV7S3A2A0A539 114 aa11.27□□□□□ -0.61
PROM1-207ENST00000508167 PSMC3P17980 439 aa11.27□□□□□ -0.61
PROM1-207ENST00000508167 L1CAMP32004 1257 aa11.27□□□□□ -0.61
PROM1-207ENST00000508167 FAM182AQ5T1J6 154 aa11.27□□□□□ -0.61
PROM1-207ENST00000508167 ANKRD22Q5VYY1 191 aa11.27□□□□□ -0.61
PROM1-207ENST00000508167 PARM1Q6UWI2 310 aa11.27□□□□□ -0.61
PROM1-207ENST00000508167 ZC3H18Q86VM9 953 aaKnown RBP11.27□□□□□ -0.61
PROM1-207ENST00000508167 NAT8LQ8N9F0 302 aa11.27□□□□□ -0.61
PROM1-207ENST00000508167 NETO2Q8NC67 525 aa11.27□□□□□ -0.61
PROM1-207ENST00000508167 MAIP1Q8WWC4 291 aa11.27□□□□□ -0.61
PROM1-207ENST00000508167 PHF7Q9BWX1 381 aaPredicted RBP11.27□□□□□ -0.61
PROM1-207ENST00000508167 CWC15Q9P013 229 aaKnown RBP11.27□□□□□ -0.61
PROM1-207ENST00000508167 GRXCR2A6NFK2 248 aa11.27□□□□□ -0.61
PROM1-207ENST00000508167 DNALI1O14645 258 aaPredicted RBP11.27□□□□□ -0.61
PROM1-207ENST00000508167 NFATC1O95644 943 aa11.27□□□□□ -0.61
PROM1-207ENST00000508167 ADH1CP00326 375 aa11.27□□□□□ -0.61
PROM1-207ENST00000508167 RHOCP08134 193 aa11.27□□□□□ -0.61
PROM1-207ENST00000508167 ERCC2P18074 760 aa11.27□□□□□ -0.61
PROM1-207ENST00000508167 MPPE1Q53F39 396 aa11.27□□□□□ -0.61
PROM1-207ENST00000508167 LY6G5CQ5SRR4 150 aa11.27□□□□□ -0.61
PROM1-207ENST00000508167 PIK3R6Q5UE93 754 aa11.27□□□□□ -0.61
PROM1-207ENST00000508167 C14orf80Q86SX3 495 aa11.27□□□□□ -0.61
PROM1-207ENST00000508167 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.27□□□□□ -0.61
PROM1-207ENST00000508167 PQLC3Q8N755 202 aa11.27□□□□□ -0.61
PROM1-207ENST00000508167 SLC39A13Q96H72 371 aa11.27□□□□□ -0.61
PROM1-207ENST00000508167 E7ESA3 106 aa11.26□□□□□ -0.61
PROM1-207ENST00000508167 FAM72CH0Y354 149 aa11.26□□□□□ -0.61
PROM1-207ENST00000508167 ZFXP17010 805 aaPredicted RBP11.26□□□□□ -0.61
PROM1-207ENST00000508167 DRD4P21917 467 aa11.26□□□□□ -0.61
PROM1-207ENST00000508167 GPX6P59796 221 aa11.26□□□□□ -0.61
PROM1-207ENST00000508167 ANKRD20A8PQ5CZ79 823 aa11.26□□□□□ -0.61
PROM1-207ENST00000508167 FAM72AQ5TYM5 149 aa11.26□□□□□ -0.61
PROM1-207ENST00000508167 FAM72DQ6L9T8 149 aa11.26□□□□□ -0.61
PROM1-207ENST00000508167 FAM72BQ86X60 149 aa11.26□□□□□ -0.61
PROM1-207ENST00000508167 PSTKQ8IV42 348 aaKnown RBP11.26□□□□□ -0.61
PROM1-207ENST00000508167 ZNF276Q8N554 614 aa11.26□□□□□ -0.61
PROM1-207ENST00000508167 ZNF473Q8WTR7 871 aaKnown RBP11.26□□□□□ -0.61
PROM1-207ENST00000508167 MAML1Q92585 1016 aa11.26□□□□□ -0.61
PROM1-207ENST00000508167 CSPG4P5Q96PW8 444 aa11.26□□□□□ -0.61
PROM1-207ENST00000508167 XPO6Q96QU8 1125 aaKnown RBP11.26□□□□□ -0.61
PROM1-207ENST00000508167 DHRS4Q9BTZ2 278 aa11.26□□□□□ -0.61
PROM1-207ENST00000508167 ARHGEF38Q9NXL2 777 aa11.26□□□□□ -0.61
PROM1-207ENST00000508167 NUMBLQ9Y6R0 609 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms