RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 NR2C2P49116 596 aa14.53□□□□□ -0.08
RNF4-208ENST00000507247 PAPOLAP51003 745 aaKnown RBP14.53□□□□□ -0.08
RNF4-208ENST00000507247 YBEYP58557 167 aaPredicted RBP14.53□□□□□ -0.08
RNF4-208ENST00000507247 MESP2Q0VG99 397 aa14.53□□□□□ -0.08
RNF4-208ENST00000507247 TDGQ13569 410 aa14.53□□□□□ -0.08
RNF4-208ENST00000507247 TUBB2AQ13885 445 aa14.53□□□□□ -0.08
RNF4-208ENST00000507247 POLD3Q15054 466 aaPredicted RBP14.53□□□□□ -0.08
RNF4-208ENST00000507247 IER5LQ5T953 404 aa14.53□□□□□ -0.08
RNF4-208ENST00000507247 ZNF572Q7Z3I7 529 aaPredicted RBP14.53□□□□□ -0.08
RNF4-208ENST00000507247 ZC3H18Q86VM9 953 aaKnown RBP14.53□□□□□ -0.08
RNF4-208ENST00000507247 APCDD1Q8J025 514 aa14.53□□□□□ -0.08
RNF4-208ENST00000507247 PHTF2Q8N3S3 785 aa14.53□□□□□ -0.08
RNF4-208ENST00000507247 TTC13Q8NBP0 860 aa14.53□□□□□ -0.08
RNF4-208ENST00000507247 SLC35B2Q8TB61 432 aa14.53□□□□□ -0.08
RNF4-208ENST00000507247 CSGALNACT1Q8TDX6 532 aa14.53□□□□□ -0.08
RNF4-208ENST00000507247 XPO6Q96QU8 1125 aaKnown RBP14.53□□□□□ -0.08
RNF4-208ENST00000507247 TUBB2BQ9BVA1 445 aa14.53□□□□□ -0.08
RNF4-208ENST00000507247 SLC2A11Q9BYW1 496 aa14.53□□□□□ -0.08
RNF4-208ENST00000507247 MAGEH1Q9H213 219 aa14.53□□□□□ -0.08
RNF4-208ENST00000507247 C10orf88Q9H8K7 445 aa14.53□□□□□ -0.08
RNF4-208ENST00000507247 L2HGDHQ9H9P8 463 aa14.53□□□□□ -0.08
RNF4-208ENST00000507247 TRPV5Q9NQA5 729 aa14.53□□□□□ -0.08
RNF4-208ENST00000507247 ABCB8Q9NUT2 735 aa14.53□□□□□ -0.08
RNF4-208ENST00000507247 DNAJC17Q9NVM6 304 aaKnown RBP14.53□□□□□ -0.08
RNF4-208ENST00000507247 KIAA1522Q9P206 1035 aaPredicted RBP14.53□□□□□ -0.08
RNF4-208ENST00000507247 INTS6Q9UL03 887 aaKnown RBP14.53□□□□□ -0.08
RNF4-208ENST00000507247 DNPEPQ9ULA0 475 aa14.53□□□□□ -0.08
RNF4-208ENST00000507247 RAD54BQ9Y620 910 aa14.53□□□□□ -0.08
RNF4-208ENST00000507247 ARHGAP42A6NI28 874 aa14.52□□□□□ -0.09
RNF4-208ENST00000507247 LIASO43766 372 aa14.52□□□□□ -0.09
RNF4-208ENST00000507247 SRFP11831 508 aa14.52□□□□□ -0.09
RNF4-208ENST00000507247 PABPC1P11940 636 aaKnown RBP14.52□□□□□ -0.09
RNF4-208ENST00000507247 GLDCP23378 1020 aa14.52□□□□□ -0.09
RNF4-208ENST00000507247 GARSP41250 739 aaKnown RBP14.52□□□□□ -0.09
RNF4-208ENST00000507247 DGKGP49619 791 aa14.52□□□□□ -0.09
RNF4-208ENST00000507247 EIF3EP60228 445 aaKnown RBP14.52□□□□□ -0.09
RNF4-208ENST00000507247 CKAP4Q07065 602 aaKnown RBP14.52□□□□□ -0.09
RNF4-208ENST00000507247 SERINC3Q13530 473 aa14.52□□□□□ -0.09
RNF4-208ENST00000507247 SNX1Q13596 522 aa14.52□□□□□ -0.09
RNF4-208ENST00000507247 CCNG2Q16589 344 aa14.52□□□□□ -0.09
RNF4-208ENST00000507247 CYP1B1Q16678 543 aa14.52□□□□□ -0.09
RNF4-208ENST00000507247 PLEKHG6Q3KR16 790 aa14.52□□□□□ -0.09
RNF4-208ENST00000507247 PARP15Q460N3 678 aa14.52□□□□□ -0.09
RNF4-208ENST00000507247 FUT11Q495W5 492 aa14.52□□□□□ -0.09
RNF4-208ENST00000507247 ZNF783Q6ZMS7 281 aa14.52□□□□□ -0.09
RNF4-208ENST00000507247 KIAA0907Q7Z7F0 614 aaPredicted RBP14.52□□□□□ -0.09
RNF4-208ENST00000507247 CCDC117Q8IWD4 279 aaPredicted RBP14.52□□□□□ -0.09
RNF4-208ENST00000507247 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.52□□□□□ -0.09
RNF4-208ENST00000507247 C12orf50Q8NA57 414 aaPredicted RBP14.52□□□□□ -0.09
RNF4-208ENST00000507247 DNASE1L2Q92874 299 aa14.52□□□□□ -0.09
RNF4-208ENST00000507247 HDAC11Q96DB2 347 aa14.52□□□□□ -0.09
RNF4-208ENST00000507247 LGMNQ99538 433 aa14.52□□□□□ -0.09
RNF4-208ENST00000507247 FEM1AQ9BSK4 669 aa14.52□□□□□ -0.09
RNF4-208ENST00000507247 ACE2Q9BYF1 805 aaPredicted RBP14.52□□□□□ -0.09
RNF4-208ENST00000507247 MUC3BQ9H195 1237 aa14.52□□□□□ -0.09
RNF4-208ENST00000507247 RBM12Q9NTZ6 932 aaKnown RBP14.52□□□□□ -0.09
RNF4-208ENST00000507247 GGA2Q9UJY4 613 aa14.52□□□□□ -0.09
RNF4-208ENST00000507247 TTC28Q96AY4 2481 aa14.52□□□□□ -0.09
RNF4-208ENST00000507247 MCF2LO15068 1137 aa14.51□□□□□ -0.09
RNF4-208ENST00000507247 SNAP91O60641 907 aa14.51□□□□□ -0.09
RNF4-208ENST00000507247 MAFKO60675 156 aa14.51□□□□□ -0.09
RNF4-208ENST00000507247 PHF2O75151 1096 aa14.51□□□□□ -0.09
RNF4-208ENST00000507247 RBP3P10745 1247 aa14.51□□□□□ -0.09
RNF4-208ENST00000507247 VAV1P15498 845 aa14.51□□□□□ -0.09
RNF4-208ENST00000507247 PLK1P53350 603 aa14.51□□□□□ -0.09
RNF4-208ENST00000507247 KDSRQ06136 332 aa14.51□□□□□ -0.09
RNF4-208ENST00000507247 PPIDQ08752 370 aaKnown RBP14.51□□□□□ -0.09
RNF4-208ENST00000507247 C2orf54Q08AI8 447 aa14.51□□□□□ -0.09
RNF4-208ENST00000507247 XRCC4Q13426 336 aa14.51□□□□□ -0.09
RNF4-208ENST00000507247 PDK1Q15118 436 aa14.51□□□□□ -0.09
RNF4-208ENST00000507247 PRKD1Q15139 912 aaPredicted RBP14.51□□□□□ -0.09
RNF4-208ENST00000507247 OASLQ15646 514 aaKnown RBP14.51□□□□□ -0.09
RNF4-208ENST00000507247 GEN1Q17RS7 908 aa14.51□□□□□ -0.09
RNF4-208ENST00000507247 PITRM1Q5JRX3 1037 aa14.51□□□□□ -0.09
RNF4-208ENST00000507247 FAM182AQ5T1J6 154 aa14.51□□□□□ -0.09
RNF4-208ENST00000507247 TMEM215Q68D42 235 aa14.51□□□□□ -0.09
RNF4-208ENST00000507247 TTC27Q6P3X3 843 aa14.51□□□□□ -0.09
RNF4-208ENST00000507247 BZW1Q7L1Q6 419 aaKnown RBP14.51□□□□□ -0.09
RNF4-208ENST00000507247 ATPAF2Q8N5M1 289 aa14.51□□□□□ -0.09
RNF4-208ENST00000507247 ZNF557Q8N988 423 aaPredicted RBP14.51□□□□□ -0.09
RNF4-208ENST00000507247 SPATA4Q8NEY3 305 aa14.51□□□□□ -0.09
RNF4-208ENST00000507247 QKIQ96PU8 341 aaKnown RBP eCLIP14.51□□□□□ -0.09
RNF4-208ENST00000507247 SPON2Q9BUD6 331 aa14.51□□□□□ -0.09
RNF4-208ENST00000507247 DDX47Q9H0S4 455 aaKnown RBP14.51□□□□□ -0.09
RNF4-208ENST00000507247 ATP13A1Q9HD20 1204 aa14.51□□□□□ -0.09
RNF4-208ENST00000507247 SLC2A4RGQ9NR83 387 aa14.51□□□□□ -0.09
RNF4-208ENST00000507247 HEBP1Q9NRV9 189 aa14.51□□□□□ -0.09
RNF4-208ENST00000507247 DUSP12Q9UNI6 340 aa14.51□□□□□ -0.09
RNF4-208ENST00000507247 SLC27A6Q9Y2P4 619 aa14.51□□□□□ -0.09
RNF4-208ENST00000507247 ACTL7AQ9Y615 435 aa14.51□□□□□ -0.09
RNF4-208ENST00000507247 MUC22E2RYF6 1773 aaPredicted RBP14.51□□□□□ -0.09
RNF4-208ENST00000507247 GOLGA6L10A0A0M3HER8 536 aa14.5□□□□□ -0.09
RNF4-208ENST00000507247 SPECC1L-ADORA2AF8WAN1 911 aa14.5□□□□□ -0.09
RNF4-208ENST00000507247 H7C0C1 242 aa14.5□□□□□ -0.09
RNF4-208ENST00000507247 J3KR12 359 aa14.5□□□□□ -0.09
RNF4-208ENST00000507247 PPP1R12AO14974 1030 aaPredicted RBP14.5□□□□□ -0.09
RNF4-208ENST00000507247 NCAM2O15394 837 aa14.5□□□□□ -0.09
RNF4-208ENST00000507247 ZMPSTE24O75844 475 aa14.5□□□□□ -0.09
RNF4-208ENST00000507247 MX2P20592 715 aa14.5□□□□□ -0.09
RNF4-208ENST00000507247 CTHP32929 405 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms