RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 WASH3PC4AMC7 463 aa7.47□□□□□ -1.21
GYPB-206ENST00000506516 PROB1E7EW31 1015 aa7.47□□□□□ -1.21
GYPB-206ENST00000506516 ERVH48-1M5A8F1 160 aa7.47□□□□□ -1.21
GYPB-206ENST00000506516 MYO1FO00160 1098 aa7.47□□□□□ -1.21
GYPB-206ENST00000506516 AXIN1O15169 862 aa7.47□□□□□ -1.21
GYPB-206ENST00000506516 PRPSAP2O60256 369 aa7.47□□□□□ -1.21
GYPB-206ENST00000506516 LILRB5O75023 590 aa7.47□□□□□ -1.21
GYPB-206ENST00000506516 ADAM23O75077 832 aa7.47□□□□□ -1.21
GYPB-206ENST00000506516 CNTN5O94779 1100 aa7.47□□□□□ -1.21
GYPB-206ENST00000506516 CYP1A2P05177 515 aa7.47□□□□□ -1.21
GYPB-206ENST00000506516 SRPRAP08240 638 aaKnown RBP7.47□□□□□ -1.21
GYPB-206ENST00000506516 TDGF1P13385 188 aa7.47□□□□□ -1.21
GYPB-206ENST00000506516 L1CAMP32004 1257 aa7.47□□□□□ -1.21
GYPB-206ENST00000506516 PLA2G5P39877 138 aa7.47□□□□□ -1.21
GYPB-206ENST00000506516 CSKP41240 450 aa7.47□□□□□ -1.21
GYPB-206ENST00000506516 WASP42768 502 aa7.47□□□□□ -1.21
GYPB-206ENST00000506516 PLK1P53350 603 aa7.47□□□□□ -1.21
GYPB-206ENST00000506516 KRT83P78385 493 aa7.47□□□□□ -1.21
GYPB-206ENST00000506516 ECT2LQ008S8 904 aa7.47□□□□□ -1.21
GYPB-206ENST00000506516 NRG1Q02297 640 aaPredicted RBP7.47□□□□□ -1.21
GYPB-206ENST00000506516 SULT2A1Q06520 285 aa7.47□□□□□ -1.21
GYPB-206ENST00000506516 PIGHQ14442 188 aaPredicted RBP7.47□□□□□ -1.21
GYPB-206ENST00000506516 ZNF234Q14588 700 aa7.47□□□□□ -1.21
GYPB-206ENST00000506516 ASTE1Q2TB18 679 aaPredicted RBP7.47□□□□□ -1.21
GYPB-206ENST00000506516 FNDC3BQ53EP0 1204 aaKnown RBP7.47□□□□□ -1.21
GYPB-206ENST00000506516 USP39Q53GS9 565 aaKnown RBP7.47□□□□□ -1.21
GYPB-206ENST00000506516 PITRM1Q5JRX3 1037 aa7.47□□□□□ -1.21
GYPB-206ENST00000506516 C6orf118Q5T5N4 469 aa7.47□□□□□ -1.21
GYPB-206ENST00000506516 ERMARDQ5T6L9 678 aa7.47□□□□□ -1.21
GYPB-206ENST00000506516 TMEM215Q68D42 235 aa7.47□□□□□ -1.21
GYPB-206ENST00000506516 HEATR6Q6AI08 1181 aaKnown RBP7.47□□□□□ -1.21
GYPB-206ENST00000506516 ANO7Q6IWH7 933 aa7.47□□□□□ -1.21
GYPB-206ENST00000506516 RWDD4Q6NW29 188 aaKnown RBP7.47□□□□□ -1.21
GYPB-206ENST00000506516 SETD3Q86TU7 594 aaPredicted RBP7.47□□□□□ -1.21
GYPB-206ENST00000506516 ADIPOR2Q86V24 386 aa7.47□□□□□ -1.21
GYPB-206ENST00000506516 C11orf74Q86VG3 221 aa7.47□□□□□ -1.21
GYPB-206ENST00000506516 CCDC170Q8IYT3 715 aa7.47□□□□□ -1.21
GYPB-206ENST00000506516 CCDC185Q8N715 623 aa7.47□□□□□ -1.21
GYPB-206ENST00000506516 KDM1BQ8NB78 822 aa7.47□□□□□ -1.21
GYPB-206ENST00000506516 WFDC5Q8TCV5 224 aa7.47□□□□□ -1.21
GYPB-206ENST00000506516 CYB5D2Q8WUJ1 264 aa7.47□□□□□ -1.21
GYPB-206ENST00000506516 SORCS1Q8WY21 1168 aa7.47□□□□□ -1.21
GYPB-206ENST00000506516 LMLNQ96KR4 655 aa7.47□□□□□ -1.21
GYPB-206ENST00000506516 ACOX2Q99424 681 aa7.47□□□□□ -1.21
GYPB-206ENST00000506516 NUP85Q9BW27 656 aa7.47□□□□□ -1.21
GYPB-206ENST00000506516 MUC3BQ9H195 1237 aa7.47□□□□□ -1.21
GYPB-206ENST00000506516 ANLNQ9NQW6 1124 aa7.47□□□□□ -1.21
GYPB-206ENST00000506516 POLR3BQ9NW08 1133 aaPredicted RBP7.47□□□□□ -1.21
GYPB-206ENST00000506516 CACNA2D2Q9NY47 1150 aa7.47□□□□□ -1.21
GYPB-206ENST00000506516 BCCIPQ9P287 314 aaKnown RBP eCLIP7.47□□□□□ -1.21
GYPB-206ENST00000506516 IMPACTQ9P2X3 320 aa7.47□□□□□ -1.21
GYPB-206ENST00000506516 UVRAGQ9P2Y5 699 aa7.47□□□□□ -1.21
GYPB-206ENST00000506516 IP6K2Q9UHH9 426 aa7.47□□□□□ -1.21
GYPB-206ENST00000506516 HCN2Q9UL51 889 aa7.47□□□□□ -1.21
GYPB-206ENST00000506516 RAB23Q9ULC3 237 aa7.47□□□□□ -1.21
GYPB-206ENST00000506516 TBC1D30Q9Y2I9 924 aa7.47□□□□□ -1.21
GYPB-206ENST00000506516 SNX10Q9Y5X0 201 aa7.47□□□□□ -1.21
GYPB-206ENST00000506516 R4GN57 208 aa7.47□□□□□ -1.21
GYPB-206ENST00000506516 A0A1W2PQF6 199 aa7.46□□□□□ -1.22
GYPB-206ENST00000506516 TCRBV21S2A2A0A5A6 115 aa7.46□□□□□ -1.22
GYPB-206ENST00000506516 ILVBLA1L0T0 632 aa7.46□□□□□ -1.22
GYPB-206ENST00000506516 EIF3CLB5ME19 914 aaKnown RBP7.46□□□□□ -1.22
GYPB-206ENST00000506516 I6L893 689 aaPredicted RBP7.46□□□□□ -1.22
GYPB-206ENST00000506516 IPO7O95373 1038 aaKnown RBP7.46□□□□□ -1.22
GYPB-206ENST00000506516 LMNAP02545 664 aaKnown RBP7.46□□□□□ -1.22
GYPB-206ENST00000506516 EPHX1P07099 455 aa7.46□□□□□ -1.22
GYPB-206ENST00000506516 RHOCP08134 193 aa7.46□□□□□ -1.22
GYPB-206ENST00000506516 TMEM253P0C7T8 217 aa7.46□□□□□ -1.22
GYPB-206ENST00000506516 MIPP30301 263 aa7.46□□□□□ -1.22
GYPB-206ENST00000506516 HTR7P34969 479 aa7.46□□□□□ -1.22
GYPB-206ENST00000506516 PCK1P35558 622 aa7.46□□□□□ -1.22
GYPB-206ENST00000506516 CYLC1P35663 651 aaPredicted RBP7.46□□□□□ -1.22
GYPB-206ENST00000506516 ETFBP38117 255 aa7.46□□□□□ -1.22
GYPB-206ENST00000506516 IL12RB1P42701 662 aa7.46□□□□□ -1.22
GYPB-206ENST00000506516 PXNP49023 591 aaPredicted RBP7.46□□□□□ -1.22
GYPB-206ENST00000506516 OGDHQ02218 1023 aa7.46□□□□□ -1.22
GYPB-206ENST00000506516 DHX9Q08211 1270 aaKnown RBP7.46□□□□□ -1.22
GYPB-206ENST00000506516 DMWDQ09019 674 aa7.46□□□□□ -1.22
GYPB-206ENST00000506516 SCAPQ12770 1279 aa7.46□□□□□ -1.22
GYPB-206ENST00000506516 ENPP2Q13822 863 aa7.46□□□□□ -1.22
GYPB-206ENST00000506516 SIM2Q14190 667 aaPredicted RBP7.46□□□□□ -1.22
GYPB-206ENST00000506516 SPA17Q15506 151 aa7.46□□□□□ -1.22
GYPB-206ENST00000506516 HADHQ16836 314 aaKnown RBP7.46□□□□□ -1.22
GYPB-206ENST00000506516 PLEKHG6Q3KR16 790 aa7.46□□□□□ -1.22
GYPB-206ENST00000506516 RAB6CQ53S08 254 aa7.46□□□□□ -1.22
GYPB-206ENST00000506516 BOLA3Q53S33 107 aa7.46□□□□□ -1.22
GYPB-206ENST00000506516 ALFQ53S48 1182 aa7.46□□□□□ -1.22
GYPB-206ENST00000506516 ZNF783Q6ZMS7 281 aa7.46□□□□□ -1.22
GYPB-206ENST00000506516 CEP68Q76N32 757 aa7.46□□□□□ -1.22
GYPB-206ENST00000506516 TFAP2DQ7Z6R9 452 aa7.46□□□□□ -1.22
GYPB-206ENST00000506516 RASSF3Q86WH2 238 aa7.46□□□□□ -1.22
GYPB-206ENST00000506516 CIR1Q86X95 450 aaPredicted RBP7.46□□□□□ -1.22
GYPB-206ENST00000506516 TMTC1Q8IUR5 882 aa7.46□□□□□ -1.22
GYPB-206ENST00000506516 PSTKQ8IV42 348 aaKnown RBP7.46□□□□□ -1.22
GYPB-206ENST00000506516 ZNF683Q8IZ20 524 aa7.46□□□□□ -1.22
GYPB-206ENST00000506516 APCDD1Q8J025 514 aa7.46□□□□□ -1.22
GYPB-206ENST00000506516 TC2NQ8N9U0 490 aa7.46□□□□□ -1.22
GYPB-206ENST00000506516 HMGB4Q8WW32 186 aa7.46□□□□□ -1.22
GYPB-206ENST00000506516 GAB3Q8WWW8 586 aa7.46□□□□□ -1.22
GYPB-206ENST00000506516 TBC1D31Q96DN5 1066 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms