RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 ST6GAL1P15907 406 aa6.5□□□□□ -1.37
HERC4-213ENST00000506515 PRKCHP24723 683 aa6.5□□□□□ -1.37
HERC4-213ENST00000506515 TUBA4AP68366 448 aa6.5□□□□□ -1.37
HERC4-213ENST00000506515 GOLGA8FQ08AF8 430 aa6.5□□□□□ -1.37
HERC4-213ENST00000506515 TDGQ13569 410 aa6.5□□□□□ -1.37
HERC4-213ENST00000506515 GXYLT1Q4G148 440 aa6.5□□□□□ -1.37
HERC4-213ENST00000506515 ARL13AQ5H913 290 aaPredicted RBP6.5□□□□□ -1.37
HERC4-213ENST00000506515 SLC9C2Q5TAH2 1124 aa6.5□□□□□ -1.37
HERC4-213ENST00000506515 STRIP1Q5VSL9 837 aa6.5□□□□□ -1.37
HERC4-213ENST00000506515 RNF144BQ7Z419 303 aa6.5□□□□□ -1.37
HERC4-213ENST00000506515 MAATS1Q7Z4T9 603 aa6.5□□□□□ -1.37
HERC4-213ENST00000506515 SCN4BQ8IWT1 228 aa6.5□□□□□ -1.37
HERC4-213ENST00000506515 UEVLDQ8IX04 471 aa6.5□□□□□ -1.37
HERC4-213ENST00000506515 TCP11L2Q8N4U5 519 aa6.5□□□□□ -1.37
HERC4-213ENST00000506515 ST8SIA4Q92187 359 aa6.5□□□□□ -1.37
HERC4-213ENST00000506515 RNFT2Q96EX2 444 aa6.5□□□□□ -1.37
HERC4-213ENST00000506515 ADAD1Q96M93 576 aaKnown RBP6.5□□□□□ -1.37
HERC4-213ENST00000506515 FCRL5Q96RD9 977 aa6.5□□□□□ -1.37
HERC4-213ENST00000506515 GATA5Q9BWX5 397 aaPredicted RBP6.5□□□□□ -1.37
HERC4-213ENST00000506515 TM2D2Q9BX73 214 aa6.5□□□□□ -1.37
HERC4-213ENST00000506515 IL21RQ9HBE5 538 aa6.5□□□□□ -1.37
HERC4-213ENST00000506515 SLC22A11Q9NSA0 550 aa6.5□□□□□ -1.37
HERC4-213ENST00000506515 ARL15Q9NXU5 204 aa6.5□□□□□ -1.37
HERC4-213ENST00000506515 RICTORQ6R327 1708 aa6.5□□□□□ -1.37
HERC4-213ENST00000506515 RAPGEF6Q8TEU7 1601 aa6.5□□□□□ -1.37
HERC4-213ENST00000506515 ARHGEF12Q9NZN5 1544 aa6.5□□□□□ -1.37
HERC4-213ENST00000506515 NPATQ14207 1427 aa6.5□□□□□ -1.37
HERC4-213ENST00000506515 SPATA31A5Q5VU36 1347 aa6.5□□□□□ -1.37
HERC4-213ENST00000506515 SPATA31A6Q5VVP1 1343 aa6.5□□□□□ -1.37
HERC4-213ENST00000506515 EMSYQ7Z589 1322 aa6.5□□□□□ -1.37
HERC4-213ENST00000506515 SPATA31A7Q8IWB4 1347 aa6.5□□□□□ -1.37
HERC4-213ENST00000506515 ZNF518AQ6AHZ1 1483 aa6.49□□□□□ -1.37
HERC4-213ENST00000506515 MCIDASD6RGH6 385 aa6.49□□□□□ -1.37
HERC4-213ENST00000506515 ARSAP15289 507 aa6.49□□□□□ -1.37
HERC4-213ENST00000506515 GSTM2P28161 218 aa6.49□□□□□ -1.37
HERC4-213ENST00000506515 ELF1P32519 619 aa6.49□□□□□ -1.37
HERC4-213ENST00000506515 KRT9P35527 623 aa6.49□□□□□ -1.37
HERC4-213ENST00000506515 DDIT3P35638 169 aa6.49□□□□□ -1.37
HERC4-213ENST00000506515 RPS6KA3P51812 740 aa6.49□□□□□ -1.37
HERC4-213ENST00000506515 MVDP53602 400 aa6.49□□□□□ -1.37
HERC4-213ENST00000506515 ADPRHP54922 357 aa6.49□□□□□ -1.37
HERC4-213ENST00000506515 NR1H2P55055 460 aa6.49□□□□□ -1.37
HERC4-213ENST00000506515 YPEL5P62699 121 aa6.49□□□□□ -1.37
HERC4-213ENST00000506515 ARHGAP8P85298 464 aa6.49□□□□□ -1.37
HERC4-213ENST00000506515 TFF2Q03403 129 aa6.49□□□□□ -1.37
HERC4-213ENST00000506515 NFIL3Q16649 462 aa6.49□□□□□ -1.37
HERC4-213ENST00000506515 FBXO42Q6P3S6 717 aa6.49□□□□□ -1.37
HERC4-213ENST00000506515 LRRC8DQ7L1W4 858 aa6.49□□□□□ -1.37
HERC4-213ENST00000506515 MDGA2Q7Z553 956 aa6.49□□□□□ -1.37
HERC4-213ENST00000506515 C2CD4CQ8TF44 421 aa6.49□□□□□ -1.37
HERC4-213ENST00000506515 PAIP1Q9H074 479 aaKnown RBP6.49□□□□□ -1.37
HERC4-213ENST00000506515 MROH8Q9H579 483 aa6.49□□□□□ -1.37
HERC4-213ENST00000506515 FBXO4Q9UKT5 387 aa6.49□□□□□ -1.37
HERC4-213ENST00000506515 TBX20Q9UMR3 447 aa6.49□□□□□ -1.37
HERC4-213ENST00000506515 TMEM98Q9Y2Y6 226 aa6.49□□□□□ -1.37
HERC4-213ENST00000506515 PKP3Q9Y446 797 aa6.49□□□□□ -1.37
HERC4-213ENST00000506515 PTPRKQ15262 1439 aa6.49□□□□□ -1.37
HERC4-213ENST00000506515 STRCQ7RTU9 1775 aa6.49□□□□□ -1.37
HERC4-213ENST00000506515 WDR33Q9C0J8 1336 aaKnown RBP6.49□□□□□ -1.37
HERC4-213ENST00000506515 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.48□□□□□ -1.37
HERC4-213ENST00000506515 CCNT1O60563 726 aaKnown RBP6.48□□□□□ -1.37
HERC4-213ENST00000506515 MBD4O95243 580 aa6.48□□□□□ -1.37
HERC4-213ENST00000506515 METTL18O95568 372 aa6.48□□□□□ -1.37
HERC4-213ENST00000506515 NUDT3O95989 172 aa6.48□□□□□ -1.37
HERC4-213ENST00000506515 HOXB9P17482 250 aaPredicted RBP6.48□□□□□ -1.37
HERC4-213ENST00000506515 BMP5P22003 454 aa6.48□□□□□ -1.37
HERC4-213ENST00000506515 PSMC2P35998 433 aaKnown RBP6.48□□□□□ -1.37
HERC4-213ENST00000506515 SOX2P48431 317 aa6.48□□□□□ -1.37
HERC4-213ENST00000506515 MPP1Q00013 466 aa6.48□□□□□ -1.37
HERC4-213ENST00000506515 GALNT2Q10471 571 aa6.48□□□□□ -1.37
HERC4-213ENST00000506515 TBL3Q12788 808 aaKnown RBP6.48□□□□□ -1.37
HERC4-213ENST00000506515 GPR68Q15743 365 aa6.48□□□□□ -1.37
HERC4-213ENST00000506515 SH2D4BQ5SQS7 431 aa6.48□□□□□ -1.37
HERC4-213ENST00000506515 SLC30A9Q6PML9 568 aa6.48□□□□□ -1.37
HERC4-213ENST00000506515 ZNF474Q6S9Z5 364 aaPredicted RBP6.48□□□□□ -1.37
HERC4-213ENST00000506515 RBM44Q6ZP01 1051 aaKnown RBP6.48□□□□□ -1.37
HERC4-213ENST00000506515 RSRC2Q7L4I2 434 aaKnown RBP6.48□□□□□ -1.37
HERC4-213ENST00000506515 AFAP1Q8N556 730 aa6.48□□□□□ -1.37
HERC4-213ENST00000506515 EXD3Q8N9H8 876 aa6.48□□□□□ -1.37
HERC4-213ENST00000506515 FAM98AQ8NCA5 519 aaKnown RBP6.48□□□□□ -1.37
HERC4-213ENST00000506515 PPHLN1Q8NEY8 458 aaKnown RBP6.48□□□□□ -1.37
HERC4-213ENST00000506515 OSR1Q8TAX0 266 aaPredicted RBP6.48□□□□□ -1.37
HERC4-213ENST00000506515 FAM110DQ8TAY7 271 aaPredicted RBP6.48□□□□□ -1.37
HERC4-213ENST00000506515 P2RY11Q96G91 374 aa6.48□□□□□ -1.37
HERC4-213ENST00000506515 C5orf34Q96MH7 638 aa6.48□□□□□ -1.37
HERC4-213ENST00000506515 PHF7Q9BWX1 381 aaPredicted RBP6.48□□□□□ -1.37
HERC4-213ENST00000506515 KRTAP4-11Q9BYQ6 195 aa6.48□□□□□ -1.37
HERC4-213ENST00000506515 TAOK3Q9H2K8 898 aa6.48□□□□□ -1.37
HERC4-213ENST00000506515 ZHX3Q9H4I2 956 aa6.48□□□□□ -1.37
HERC4-213ENST00000506515 MLXIPLQ9NP71 852 aa6.48□□□□□ -1.37
HERC4-213ENST00000506515 SMC4Q9NTJ3 1288 aa6.48□□□□□ -1.37
HERC4-213ENST00000506515 CD207Q9UJ71 328 aa6.48□□□□□ -1.37
HERC4-213ENST00000506515 AGLP35573 1532 aa6.47□□□□□ -1.37
HERC4-213ENST00000506515 MANSC4A6NHS7 340 aaPredicted RBP6.47□□□□□ -1.37
HERC4-213ENST00000506515 SH2D7A6NKC9 451 aaPredicted RBP6.47□□□□□ -1.37
HERC4-213ENST00000506515 INPPL1O15357 1258 aa6.47□□□□□ -1.37
HERC4-213ENST00000506515 PROP1O75360 226 aa6.47□□□□□ -1.37
HERC4-213ENST00000506515 CD4P01730 458 aa6.47□□□□□ -1.37
HERC4-213ENST00000506515 OAZ1P54368 228 aa6.47□□□□□ -1.37
HERC4-213ENST00000506515 ELLP55199 621 aaPredicted RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms