RNA–Protein interactions for RNA: ENST00000505945.1

SIL1-208, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene SIL1, Length 250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-208ENST00000505945 RTN2O75298 545 aa11.71□□□□□ -0.53
SIL1-208ENST00000505945 FGFR1OPO95684 399 aaKnown RBP11.71□□□□□ -0.53
SIL1-208ENST00000505945 SLC2A3P11169 496 aa11.71□□□□□ -0.53
SIL1-208ENST00000505945 MAT2AP31153 395 aaKnown RBP11.71□□□□□ -0.53
SIL1-208ENST00000505945 CCR1P32246 355 aa11.71□□□□□ -0.53
SIL1-208ENST00000505945 IRAK1P51617 712 aa11.71□□□□□ -0.53
SIL1-208ENST00000505945 CLDN6P56747 220 aa11.71□□□□□ -0.53
SIL1-208ENST00000505945 PPP2CBP62714 309 aa11.71□□□□□ -0.53
SIL1-208ENST00000505945 PPP2CAP67775 309 aa11.71□□□□□ -0.53
SIL1-208ENST00000505945 CENPCQ03188 943 aa11.71□□□□□ -0.53
SIL1-208ENST00000505945 SULT2A1Q06520 285 aa11.71□□□□□ -0.53
SIL1-208ENST00000505945 BNIP3Q12983 259 aa11.71□□□□□ -0.53
SIL1-208ENST00000505945 DNAJC3Q13217 504 aa11.71□□□□□ -0.53
SIL1-208ENST00000505945 NME3Q13232 169 aa11.71□□□□□ -0.53
SIL1-208ENST00000505945 AUHQ13825 339 aaKnown RBP11.71□□□□□ -0.53
SIL1-208ENST00000505945 POM121L1PQ3SYA9 428 aa11.71□□□□□ -0.53
SIL1-208ENST00000505945 RABGAP1LQ5R372 815 aa11.71□□□□□ -0.53
SIL1-208ENST00000505945 TRIM65Q6PJ69 517 aa11.71□□□□□ -0.53
SIL1-208ENST00000505945 EID2Q8N6I1 236 aa11.71□□□□□ -0.53
SIL1-208ENST00000505945 PDCD7Q8N8D1 485 aaKnown RBP11.71□□□□□ -0.53
SIL1-208ENST00000505945 SAP25Q8TEE9 199 aa11.71□□□□□ -0.53
SIL1-208ENST00000505945 ALG14Q96F25 216 aa11.71□□□□□ -0.53
SIL1-208ENST00000505945 CNDP2Q96KP4 475 aaKnown RBP11.71□□□□□ -0.53
SIL1-208ENST00000505945 PPP1R13BQ96KQ4 1090 aa11.71□□□□□ -0.53
SIL1-208ENST00000505945 RPRD1AQ96P16 312 aaPredicted RBP11.71□□□□□ -0.53
SIL1-208ENST00000505945 SLC2A13Q96QE2 648 aa11.71□□□□□ -0.53
SIL1-208ENST00000505945 SPAG5Q96R06 1193 aa11.71□□□□□ -0.53
SIL1-208ENST00000505945 FEM1AQ9BSK4 669 aa11.71□□□□□ -0.53
SIL1-208ENST00000505945 ARHGAP20Q9P2F6 1191 aa11.71□□□□□ -0.53
SIL1-208ENST00000505945 VANGL2Q9ULK5 521 aa11.71□□□□□ -0.53
SIL1-208ENST00000505945 DOCK9Q9BZ29 2069 aa11.71□□□□□ -0.54
SIL1-208ENST00000505945 ARID1BQ8NFD5 2236 aaPredicted RBP11.7□□□□□ -0.54
SIL1-208ENST00000505945 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.7□□□□□ -0.54
SIL1-208ENST00000505945 LATO43561 262 aa11.7□□□□□ -0.54
SIL1-208ENST00000505945 GLI1P08151 1106 aa11.7□□□□□ -0.54
SIL1-208ENST00000505945 JUPP14923 745 aa11.7□□□□□ -0.54
SIL1-208ENST00000505945 GGCXP38435 758 aa11.7□□□□□ -0.54
SIL1-208ENST00000505945 ARRB1P49407 418 aaPredicted RBP11.7□□□□□ -0.54
SIL1-208ENST00000505945 OXCT1P55809 520 aa11.7□□□□□ -0.54
SIL1-208ENST00000505945 NXPH1P58417 271 aa11.7□□□□□ -0.54
SIL1-208ENST00000505945 ZNF177Q13360 481 aaPredicted RBP11.7□□□□□ -0.54
SIL1-208ENST00000505945 DLG2Q15700 870 aa11.7□□□□□ -0.54
SIL1-208ENST00000505945 SLC45A4Q5BKX6 768 aa11.7□□□□□ -0.54
SIL1-208ENST00000505945 EFHC1Q5JVL4 640 aa11.7□□□□□ -0.54
SIL1-208ENST00000505945 TTC39BQ5VTQ0 682 aaPredicted RBP11.7□□□□□ -0.54
SIL1-208ENST00000505945 OR6B2Q6IFH4 312 aa11.7□□□□□ -0.54
SIL1-208ENST00000505945 C14orf80Q86SX3 495 aa11.7□□□□□ -0.54
SIL1-208ENST00000505945 PRPF39Q86UA1 669 aaKnown RBP11.7□□□□□ -0.54
SIL1-208ENST00000505945 TMPRSS12Q86WS5 348 aa11.7□□□□□ -0.54
SIL1-208ENST00000505945 SPATS2Q86XZ4 545 aaKnown RBP11.7□□□□□ -0.54
SIL1-208ENST00000505945 OR8D1Q8WZ84 308 aa11.7□□□□□ -0.54
SIL1-208ENST00000505945 LRIG1Q96JA1 1093 aa11.7□□□□□ -0.54
SIL1-208ENST00000505945 APEX2Q9UBZ4 518 aa11.7□□□□□ -0.54
SIL1-208ENST00000505945 PPM1HQ9ULR3 514 aa11.7□□□□□ -0.54
SIL1-208ENST00000505945 OR51B4Q9Y5P0 310 aa11.7□□□□□ -0.54
SIL1-208ENST00000505945 ATP9BO43861 1147 aa11.69□□□□□ -0.54
SIL1-208ENST00000505945 BNIP3LO60238 219 aa11.69□□□□□ -0.54
SIL1-208ENST00000505945 HSF2BPO75031 334 aa11.69□□□□□ -0.54
SIL1-208ENST00000505945 PAGE1O75459 146 aa11.69□□□□□ -0.54
SIL1-208ENST00000505945 ERBB2P04626 1255 aa11.69□□□□□ -0.54
SIL1-208ENST00000505945 ZNF18P17022 549 aa11.69□□□□□ -0.54
SIL1-208ENST00000505945 EPHA8P29322 1005 aaPredicted RBP11.69□□□□□ -0.54
SIL1-208ENST00000505945 RXRGP48443 463 aa11.69□□□□□ -0.54
SIL1-208ENST00000505945 CNTN1Q12860 1018 aa11.69□□□□□ -0.54
SIL1-208ENST00000505945 ACAP1Q15027 740 aa11.69□□□□□ -0.54
SIL1-208ENST00000505945 SOWAHCQ53LP3 525 aaPredicted RBP11.69□□□□□ -0.54
SIL1-208ENST00000505945 FAM46CQ5VWP2 391 aa11.69□□□□□ -0.54
SIL1-208ENST00000505945 NAPEPLDQ6IQ20 393 aa11.69□□□□□ -0.54
SIL1-208ENST00000505945 OLFML1Q6UWY5 402 aa11.69□□□□□ -0.54
SIL1-208ENST00000505945 GBP6Q6ZN66 633 aa11.69□□□□□ -0.54
SIL1-208ENST00000505945 C11orf57Q6ZUT1 292 aaPredicted RBP11.69□□□□□ -0.54
SIL1-208ENST00000505945 FAM183BPQ6ZVS7 135 aa11.69□□□□□ -0.54
SIL1-208ENST00000505945 Q6ZVU0 165 aa11.69□□□□□ -0.54
SIL1-208ENST00000505945 DSG4Q86SJ6 1040 aa11.69□□□□□ -0.54
SIL1-208ENST00000505945 MFSD2AQ8NA29 543 aa11.69□□□□□ -0.54
SIL1-208ENST00000505945 C1orf131Q8NDD1 294 aaKnown RBP11.69□□□□□ -0.54
SIL1-208ENST00000505945 PIP4K2CQ8TBX8 421 aa11.69□□□□□ -0.54
SIL1-208ENST00000505945 SHC3Q92529 594 aa11.69□□□□□ -0.54
SIL1-208ENST00000505945 FAM131CQ96AQ9 280 aa11.69□□□□□ -0.54
SIL1-208ENST00000505945 FAM81BQ96LP2 452 aa11.69□□□□□ -0.54
SIL1-208ENST00000505945 PPP1R9BQ96SB3 815 aa11.69□□□□□ -0.54
SIL1-208ENST00000505945 SIK2Q9H0K1 926 aa11.69□□□□□ -0.54
SIL1-208ENST00000505945 ERVMER34-1Q9H9K5 563 aa11.69□□□□□ -0.54
SIL1-208ENST00000505945 SCUBE2Q9NQ36 999 aa11.69□□□□□ -0.54
SIL1-208ENST00000505945 ASNSD1Q9NWL6 643 aa11.69□□□□□ -0.54
SIL1-208ENST00000505945 RWDD2AQ9UIY3 292 aa11.69□□□□□ -0.54
SIL1-208ENST00000505945 SLC25A13Q9UJS0 675 aa11.69□□□□□ -0.54
SIL1-208ENST00000505945 VPS28Q9UK41 221 aa11.69□□□□□ -0.54
SIL1-208ENST00000505945 TPX2Q9ULW0 747 aaKnown RBP11.69□□□□□ -0.54
SIL1-208ENST00000505945 PCDHGC3Q9UN70 934 aa11.69□□□□□ -0.54
SIL1-208ENST00000505945 PCDHGA1Q9Y5H4 931 aa11.69□□□□□ -0.54
SIL1-208ENST00000505945 HS3ST4Q9Y661 456 aa11.69□□□□□ -0.54
SIL1-208ENST00000505945 NYNRINQ9P2P1 1898 aaKnown RBP11.69□□□□□ -0.54
SIL1-208ENST00000505945 COL5A1P20908 1838 aaPredicted RBP11.68□□□□□ -0.54
SIL1-208ENST00000505945 M0QYT0 321 aa11.68□□□□□ -0.54
SIL1-208ENST00000505945 MCF2LO15068 1137 aa11.68□□□□□ -0.54
SIL1-208ENST00000505945 YKT6O15498 198 aa11.68□□□□□ -0.54
SIL1-208ENST00000505945 SLC7A4O43246 635 aa11.68□□□□□ -0.54
SIL1-208ENST00000505945 PLRG1O43660 514 aaKnown RBP11.68□□□□□ -0.54
SIL1-208ENST00000505945 RFPL3O75679 317 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms