RNA–Protein interactions for RNA: ENST00000505397.1

LIN54-204, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIN54, Length 2,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-204ENST00000505397 F5H423 210 aaPredicted RBP17.32■□□□□ 0.36
LIN54-204ENST00000505397 CCNT2O60583 730 aaKnown RBP17.32■□□□□ 0.36
LIN54-204ENST00000505397 ZNF623O75123 536 aa17.32■□□□□ 0.36
LIN54-204ENST00000505397 STK10O94804 968 aaKnown RBP17.32■□□□□ 0.36
LIN54-204ENST00000505397 PAFAH1B3Q15102 231 aaKnown RBP17.32■□□□□ 0.36
LIN54-204ENST00000505397 PGM2L1Q6PCE3 622 aa17.32■□□□□ 0.36
LIN54-204ENST00000505397 DEFB106AQ8N104 65 aa17.32■□□□□ 0.36
LIN54-204ENST00000505397 ZNF483Q8TF39 744 aaPredicted RBP17.32■□□□□ 0.36
LIN54-204ENST00000505397 ADAM2Q99965 735 aa17.32■□□□□ 0.36
LIN54-204ENST00000505397 PNPOQ9NVS9 261 aa17.32■□□□□ 0.36
LIN54-204ENST00000505397 PIH1D1Q9NWS0 290 aaKnown RBP17.32■□□□□ 0.36
LIN54-204ENST00000505397 PPM1HQ9ULR3 514 aa17.32■□□□□ 0.36
LIN54-204ENST00000505397 MAP3K13O43283 966 aa17.31■□□□□ 0.36
LIN54-204ENST00000505397 BUD23O43709 281 aaKnown RBP17.31■□□□□ 0.36
LIN54-204ENST00000505397 MGEA5O60502 916 aa17.31■□□□□ 0.36
LIN54-204ENST00000505397 FESP07332 822 aa17.31■□□□□ 0.36
LIN54-204ENST00000505397 PSMB4P28070 264 aa17.31■□□□□ 0.36
LIN54-204ENST00000505397 GP5P40197 560 aa17.31■□□□□ 0.36
LIN54-204ENST00000505397 CLCNKBP51801 687 aa17.31■□□□□ 0.36
LIN54-204ENST00000505397 PPM1JQ5JR12 505 aa17.31■□□□□ 0.36
LIN54-204ENST00000505397 SPANXN3Q5MJ09 141 aa17.31■□□□□ 0.36
LIN54-204ENST00000505397 GRTP1Q5TC63 336 aa17.31■□□□□ 0.36
LIN54-204ENST00000505397 ZNF567Q8N184 647 aa17.31■□□□□ 0.36
LIN54-204ENST00000505397 RNF139Q8WU17 664 aa17.31■□□□□ 0.36
LIN54-204ENST00000505397 CPNE1Q99829 537 aa17.31■□□□□ 0.36
LIN54-204ENST00000505397 TSEN34Q9BSV6 310 aaKnown RBP17.31■□□□□ 0.36
LIN54-204ENST00000505397 CACNG4Q9UBN1 327 aa17.31■□□□□ 0.36
LIN54-204ENST00000505397 FRMPD3Q5JV73 1810 aa17.31■□□□□ 0.36
LIN54-204ENST00000505397 A0A0U1RQF3 1178 aa17.31■□□□□ 0.36
LIN54-204ENST00000505397 MEI4A8MW99 385 aa17.31■□□□□ 0.36
LIN54-204ENST00000505397 DAB1O75553 588 aa17.31■□□□□ 0.36
LIN54-204ENST00000505397 FAM163BP0C2L3 166 aa17.31■□□□□ 0.36
LIN54-204ENST00000505397 SULT1E1P49888 294 aa17.31■□□□□ 0.36
LIN54-204ENST00000505397 AFF1P51825 1210 aaKnown RBP17.31■□□□□ 0.36
LIN54-204ENST00000505397 ABCE1P61221 599 aaKnown RBP17.31■□□□□ 0.36
LIN54-204ENST00000505397 SLC25A3Q00325 362 aa17.31■□□□□ 0.36
LIN54-204ENST00000505397 PDE1BQ01064 536 aa17.31■□□□□ 0.36
LIN54-204ENST00000505397 PDK1Q15118 436 aa17.31■□□□□ 0.36
LIN54-204ENST00000505397 FAM26DQ5JW98 314 aa17.31■□□□□ 0.36
LIN54-204ENST00000505397 WSCD1Q658N2 575 aa17.31■□□□□ 0.36
LIN54-204ENST00000505397 OSTM1Q86WC4 334 aa17.31■□□□□ 0.36
LIN54-204ENST00000505397 SHKBP1Q8TBC3 707 aa17.31■□□□□ 0.36
LIN54-204ENST00000505397 CERS2Q96G23 380 aa17.31■□□□□ 0.36
LIN54-204ENST00000505397 SENP8Q96LD8 212 aa17.31■□□□□ 0.36
LIN54-204ENST00000505397 STARD7Q9NQZ5 370 aa17.31■□□□□ 0.36
LIN54-204ENST00000505397 NDE1Q9NXR1 346 aa17.31■□□□□ 0.36
LIN54-204ENST00000505397 CASTOR2A6NHX0 329 aa17.3■□□□□ 0.36
LIN54-204ENST00000505397 XPO1O14980 1071 aaKnown RBP17.3■□□□□ 0.36
LIN54-204ENST00000505397 POLBP06746 335 aa17.3■□□□□ 0.36
LIN54-204ENST00000505397 RPL9P32969 192 aaKnown RBP17.3■□□□□ 0.36
LIN54-204ENST00000505397 DPYSQ14117 519 aa17.3■□□□□ 0.36
LIN54-204ENST00000505397 FRG1Q14331 258 aaKnown RBP17.3■□□□□ 0.36
LIN54-204ENST00000505397 TRIM71Q2Q1W2 868 aaKnown RBP17.3■□□□□ 0.36
LIN54-204ENST00000505397 NAIF1Q69YI7 327 aaPredicted RBP17.3■□□□□ 0.36
LIN54-204ENST00000505397 PPP4R1Q8TF05 950 aa17.3■□□□□ 0.36
LIN54-204ENST00000505397 FCRL3Q96P31 734 aaPredicted RBP17.3■□□□□ 0.36
LIN54-204ENST00000505397 NPY6RQ99463 290 aa17.3■□□□□ 0.36
LIN54-204ENST00000505397 S100A14Q9HCY8 104 aa17.3■□□□□ 0.36
LIN54-204ENST00000505397 MIOSQ9NXC5 875 aa17.3■□□□□ 0.36
LIN54-204ENST00000505397 ADAM28Q9UKQ2 775 aa17.3■□□□□ 0.36
LIN54-204ENST00000505397 SQORQ9Y6N5 450 aa17.3■□□□□ 0.36
LIN54-204ENST00000505397 AHCYL1O43865 530 aa17.3■□□□□ 0.36
LIN54-204ENST00000505397 FKTNO75072 461 aa17.3■□□□□ 0.36
LIN54-204ENST00000505397 ERVK-10P10266 1014 aa17.3■□□□□ 0.36
LIN54-204ENST00000505397 RALBP11234 206 aa17.3■□□□□ 0.36
LIN54-204ENST00000505397 COPAP53621 1224 aa17.3■□□□□ 0.36
LIN54-204ENST00000505397 DSG1Q02413 1049 aa17.3■□□□□ 0.36
LIN54-204ENST00000505397 CCDC153Q494R4 210 aa17.3■□□□□ 0.36
LIN54-204ENST00000505397 RASSF3Q86WH2 238 aa17.3■□□□□ 0.36
LIN54-204ENST00000505397 TMEM86AQ8N2M4 240 aa17.3■□□□□ 0.36
LIN54-204ENST00000505397 ECSITQ9BQ95 431 aa17.3■□□□□ 0.36
LIN54-204ENST00000505397 GORASP1Q9BQQ3 440 aa17.3■□□□□ 0.36
LIN54-204ENST00000505397 PRDM12Q9H4Q4 367 aa17.3■□□□□ 0.36
LIN54-204ENST00000505397 PPP1R12AO14974 1030 aaPredicted RBP17.29■□□□□ 0.36
LIN54-204ENST00000505397 ACAT1P24752 427 aaKnown RBP17.29■□□□□ 0.36
LIN54-204ENST00000505397 TKTP29401 623 aaKnown RBP17.29■□□□□ 0.36
LIN54-204ENST00000505397 TYK2P29597 1187 aa17.29■□□□□ 0.36
LIN54-204ENST00000505397 PEX19P40855 299 aa17.29■□□□□ 0.36
LIN54-204ENST00000505397 VEGFBP49765 207 aa17.29■□□□□ 0.36
LIN54-204ENST00000505397 CDK7P50613 346 aa17.29■□□□□ 0.36
LIN54-204ENST00000505397 PITX1P78337 314 aaPredicted RBP17.29■□□□□ 0.36
LIN54-204ENST00000505397 DSC3Q14574 896 aa17.29■□□□□ 0.36
LIN54-204ENST00000505397 NETO2Q8NC67 525 aa17.29■□□□□ 0.36
LIN54-204ENST00000505397 PHC3Q8NDX5 983 aa17.29■□□□□ 0.36
LIN54-204ENST00000505397 ACTRT2Q8TDY3 377 aa17.29■□□□□ 0.36
LIN54-204ENST00000505397 FERMT1Q9BQL6 677 aa17.29■□□□□ 0.36
LIN54-204ENST00000505397 CEP41Q9BYV8 373 aa17.29■□□□□ 0.36
LIN54-204ENST00000505397 TMPRSS4Q9NRS4 437 aa17.29■□□□□ 0.36
LIN54-204ENST00000505397 SNX15Q9NRS6 342 aa17.29■□□□□ 0.36
LIN54-204ENST00000505397 TSC2P49815 1807 aa17.29■□□□□ 0.36
LIN54-204ENST00000505397 A0A1W2PQ45 241 aaPredicted RBP17.29■□□□□ 0.36
LIN54-204ENST00000505397 A0A1W2PQY0 241 aa17.29■□□□□ 0.36
LIN54-204ENST00000505397 DCLK1O15075 740 aa17.29■□□□□ 0.36
LIN54-204ENST00000505397 POMCP01189 267 aa17.29■□□□□ 0.36
LIN54-204ENST00000505397 GRK4P32298 578 aa17.29■□□□□ 0.36
LIN54-204ENST00000505397 LHX1P48742 406 aa17.29■□□□□ 0.36
LIN54-204ENST00000505397 DEUP1Q05D60 604 aa17.29■□□□□ 0.36
LIN54-204ENST00000505397 HNRNPDQ14103 355 aaKnown RBP17.29■□□□□ 0.36
LIN54-204ENST00000505397 RALGPS1Q5JS13 557 aa17.29■□□□□ 0.36
LIN54-204ENST00000505397 IZUMO2Q6UXV1 221 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms