RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 RNF219Q5W0B1 726 aaPredicted RBP16.54■□□□□ 0.24
PDLIM7-213ENST00000505074 GJB7Q6PEY0 223 aa16.54■□□□□ 0.24
PDLIM7-213ENST00000505074 NCEH1Q6PIU2 408 aa16.54■□□□□ 0.24
PDLIM7-213ENST00000505074 ENOSF1Q7L5Y1 443 aa16.54■□□□□ 0.24
PDLIM7-213ENST00000505074 KIAA0907Q7Z7F0 614 aaPredicted RBP16.54■□□□□ 0.24
PDLIM7-213ENST00000505074 LGI2Q8N0V4 545 aa16.54■□□□□ 0.24
PDLIM7-213ENST00000505074 KCNE4Q8WWG9 221 aa16.54■□□□□ 0.24
PDLIM7-213ENST00000505074 AZIN2Q96A70 460 aa16.54■□□□□ 0.24
PDLIM7-213ENST00000505074 HIC2Q96JB3 615 aa16.54■□□□□ 0.24
PDLIM7-213ENST00000505074 IRX2Q9BZI1 471 aaPredicted RBP16.54■□□□□ 0.24
PDLIM7-213ENST00000505074 PABPC3Q9H361 631 aaKnown RBP16.54■□□□□ 0.24
PDLIM7-213ENST00000505074 MTG2Q9H4K7 406 aa16.54■□□□□ 0.24
PDLIM7-213ENST00000505074 EBF2Q9HAK2 575 aa16.54■□□□□ 0.24
PDLIM7-213ENST00000505074 FBXL12Q9NXK8 326 aa16.54■□□□□ 0.24
PDLIM7-213ENST00000505074 COX16Q9P0S2 106 aa16.54■□□□□ 0.24
PDLIM7-213ENST00000505074 A0A1W2PR77 199 aa16.53■□□□□ 0.24
PDLIM7-213ENST00000505074 RNASEH1O60930 286 aaKnown RBP16.53■□□□□ 0.24
PDLIM7-213ENST00000505074 ASLP04424 464 aa16.53■□□□□ 0.24
PDLIM7-213ENST00000505074 FYNP06241 537 aa16.53■□□□□ 0.24
PDLIM7-213ENST00000505074 SRSF1Q07955 248 aaKnown RBP eCLIP16.53■□□□□ 0.24
PDLIM7-213ENST00000505074 NNTQ13423 1086 aa16.53■□□□□ 0.24
PDLIM7-213ENST00000505074 TPD52L1Q16890 204 aaPredicted RBP16.53■□□□□ 0.24
PDLIM7-213ENST00000505074 DCAF6Q58WW2 860 aa16.53■□□□□ 0.24
PDLIM7-213ENST00000505074 MS4A13Q5J8X5 152 aa16.53■□□□□ 0.24
PDLIM7-213ENST00000505074 SFMBT2Q5VUG0 894 aa16.53■□□□□ 0.24
PDLIM7-213ENST00000505074 SYPL2Q5VXT5 272 aa16.53■□□□□ 0.24
PDLIM7-213ENST00000505074 RAP1GAP2Q684P5 730 aa16.53■□□□□ 0.24
PDLIM7-213ENST00000505074 MMS22LQ6ZRQ5 1243 aa16.53■□□□□ 0.24
PDLIM7-213ENST00000505074 PRICKLE2Q7Z3G6 844 aa16.53■□□□□ 0.24
PDLIM7-213ENST00000505074 FIBINQ8TAL6 211 aa16.53■□□□□ 0.24
PDLIM7-213ENST00000505074 ZNF606Q8WXB4 792 aa16.53■□□□□ 0.24
PDLIM7-213ENST00000505074 RNF34Q969K3 372 aa16.53■□□□□ 0.24
PDLIM7-213ENST00000505074 MYEOVQ96EZ4 313 aa16.53■□□□□ 0.24
PDLIM7-213ENST00000505074 MED15Q96RN5 788 aa16.53■□□□□ 0.24
PDLIM7-213ENST00000505074 DPH1Q9BZG8 443 aa16.53■□□□□ 0.24
PDLIM7-213ENST00000505074 RSPH9Q9H1X1 276 aaPredicted RBP16.53■□□□□ 0.24
PDLIM7-213ENST00000505074 FAM204AQ9H8W3 233 aa16.53■□□□□ 0.24
PDLIM7-213ENST00000505074 ERVMER34-1Q9H9K5 563 aa16.53■□□□□ 0.24
PDLIM7-213ENST00000505074 POPDC2Q9HBU9 364 aa16.53■□□□□ 0.24
PDLIM7-213ENST00000505074 ACP6Q9NPH0 428 aa16.53■□□□□ 0.24
PDLIM7-213ENST00000505074 TLR4O00206 839 aa16.52■□□□□ 0.24
PDLIM7-213ENST00000505074 LUC7L3O95232 432 aaKnown RBP16.52■□□□□ 0.24
PDLIM7-213ENST00000505074 MPOP05164 745 aa16.52■□□□□ 0.24
PDLIM7-213ENST00000505074 MTIF2P46199 727 aaKnown RBP16.52■□□□□ 0.24
PDLIM7-213ENST00000505074 NUMBP49757 651 aa16.52■□□□□ 0.24
PDLIM7-213ENST00000505074 NXPH1P58417 271 aa16.52■□□□□ 0.24
PDLIM7-213ENST00000505074 ERVPABLB-1P60509 514 aa16.52■□□□□ 0.24
PDLIM7-213ENST00000505074 ZC3H12AQ5D1E8 599 aaKnown RBP16.52■□□□□ 0.24
PDLIM7-213ENST00000505074 PITRM1Q5JRX3 1037 aa16.52■□□□□ 0.24
PDLIM7-213ENST00000505074 TRIM65Q6PJ69 517 aa16.52■□□□□ 0.24
PDLIM7-213ENST00000505074 GBP6Q6ZN66 633 aa16.52■□□□□ 0.24
PDLIM7-213ENST00000505074 PASD1Q8IV76 773 aa16.52■□□□□ 0.24
PDLIM7-213ENST00000505074 OR2T34Q8NGX1 318 aa16.52■□□□□ 0.24
PDLIM7-213ENST00000505074 SNRNP27Q8WVK2 155 aaKnown RBP16.52■□□□□ 0.24
PDLIM7-213ENST00000505074 FAM81BQ96LP2 452 aa16.52■□□□□ 0.24
PDLIM7-213ENST00000505074 SLC12A6Q9UHW9 1150 aa16.52■□□□□ 0.24
PDLIM7-213ENST00000505074 CYTH4Q9UIA0 394 aa16.52■□□□□ 0.24
PDLIM7-213ENST00000505074 XPO7Q9UIA9 1087 aaKnown RBP16.52■□□□□ 0.24
PDLIM7-213ENST00000505074 RWDD2AQ9UIY3 292 aa16.52■□□□□ 0.24
PDLIM7-213ENST00000505074 CNTN6Q9UQ52 1028 aa16.52■□□□□ 0.24
PDLIM7-213ENST00000505074 PCDHB1Q9Y5F3 818 aa16.52■□□□□ 0.24
PDLIM7-213ENST00000505074 NYNRINQ9P2P1 1898 aaKnown RBP16.52■□□□□ 0.23
PDLIM7-213ENST00000505074 F5H5T6 163 aa16.51■□□□□ 0.23
PDLIM7-213ENST00000505074 WNT9AO14904 365 aa16.51■□□□□ 0.23
PDLIM7-213ENST00000505074 SIN3BO75182 1162 aa16.51■□□□□ 0.23
PDLIM7-213ENST00000505074 DXOO77932 396 aaKnown RBP16.51■□□□□ 0.23
PDLIM7-213ENST00000505074 TRUB2O95900 331 aaKnown RBP16.51■□□□□ 0.23
PDLIM7-213ENST00000505074 SLC9A1P19634 815 aa16.51■□□□□ 0.23
PDLIM7-213ENST00000505074 TACR2P21452 398 aa16.51■□□□□ 0.23
PDLIM7-213ENST00000505074 CCR5P51681 352 aa16.51■□□□□ 0.23
PDLIM7-213ENST00000505074 YWHAZP63104 245 aaKnown RBP16.51■□□□□ 0.23
PDLIM7-213ENST00000505074 GABREP78334 506 aa16.51■□□□□ 0.23
PDLIM7-213ENST00000505074 PDCLQ13371 301 aa16.51■□□□□ 0.23
PDLIM7-213ENST00000505074 PROX2Q3B8N5 592 aa16.51■□□□□ 0.23
PDLIM7-213ENST00000505074 FSCBQ5H9T9 825 aa16.51■□□□□ 0.23
PDLIM7-213ENST00000505074 KANSL1Q7Z3B3 1105 aa16.51■□□□□ 0.23
PDLIM7-213ENST00000505074 ATP6V0D2Q8N8Y2 350 aa16.51■□□□□ 0.23
PDLIM7-213ENST00000505074 STK32AQ8WU08 396 aa16.51■□□□□ 0.23
PDLIM7-213ENST00000505074 SLC39A13Q96H72 371 aa16.51■□□□□ 0.23
PDLIM7-213ENST00000505074 SERAC1Q96JX3 654 aa16.51■□□□□ 0.23
PDLIM7-213ENST00000505074 BTN2A3PQ96KV6 586 aa16.51■□□□□ 0.23
PDLIM7-213ENST00000505074 OMDQ99983 421 aa16.51■□□□□ 0.23
PDLIM7-213ENST00000505074 SLC4A5Q9BY07 1137 aa16.51■□□□□ 0.23
PDLIM7-213ENST00000505074 NEUROG2Q9H2A3 272 aa16.51■□□□□ 0.23
PDLIM7-213ENST00000505074 THAP9Q9H5L6 903 aa16.51■□□□□ 0.23
PDLIM7-213ENST00000505074 KIAA1468Q9P260 1216 aa16.51■□□□□ 0.23
PDLIM7-213ENST00000505074 APEX2Q9UBZ4 518 aa16.51■□□□□ 0.23
PDLIM7-213ENST00000505074 IL17BQ9UHF5 180 aa16.51■□□□□ 0.23
PDLIM7-213ENST00000505074 INTS6Q9UL03 887 aaKnown RBP16.51■□□□□ 0.23
PDLIM7-213ENST00000505074 TPX2Q9ULW0 747 aaKnown RBP16.51■□□□□ 0.23
PDLIM7-213ENST00000505074 ERVW-1Q9UQF0 538 aa16.51■□□□□ 0.23
PDLIM7-213ENST00000505074 HEMK1Q9Y5R4 338 aaPredicted RBP16.51■□□□□ 0.23
PDLIM7-213ENST00000505074 A0A1W2PP55 124 aa16.5■□□□□ 0.23
PDLIM7-213ENST00000505074 RNASEH2AO75792 299 aaKnown RBP16.5■□□□□ 0.23
PDLIM7-213ENST00000505074 CTSOP43234 321 aaPredicted RBP16.5■□□□□ 0.23
PDLIM7-213ENST00000505074 RPL34P49207 117 aaKnown RBP16.5■□□□□ 0.23
PDLIM7-213ENST00000505074 DAB2P98082 770 aa16.5■□□□□ 0.23
PDLIM7-213ENST00000505074 CDK17Q00537 523 aa16.5■□□□□ 0.23
PDLIM7-213ENST00000505074 APBA1Q02410 837 aa16.5■□□□□ 0.23
PDLIM7-213ENST00000505074 KCNJ12Q14500 433 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms