RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 WDR24Q96S15 920 aa8.5□□□□□ -1.05
CDC42SE2-208ENST00000505065 GOLPH3Q9H4A6 298 aa8.5□□□□□ -1.05
CDC42SE2-208ENST00000505065 ATP13A1Q9HD20 1204 aa8.5□□□□□ -1.05
CDC42SE2-208ENST00000505065 LHX3Q9UBR4 397 aa8.5□□□□□ -1.05
CDC42SE2-208ENST00000505065 BCLAF3A2AJT9 711 aaKnown RBP8.5□□□□□ -1.05
CDC42SE2-208ENST00000505065 HACD1B0YJ81 288 aa8.5□□□□□ -1.05
CDC42SE2-208ENST00000505065 APOC4-APOC2K7ER74 178 aa8.5□□□□□ -1.05
CDC42SE2-208ENST00000505065 TBL1XO60907 577 aa8.5□□□□□ -1.05
CDC42SE2-208ENST00000505065 APOC2P02655 101 aa8.5□□□□□ -1.05
CDC42SE2-208ENST00000505065 CCNCP24863 283 aa8.5□□□□□ -1.05
CDC42SE2-208ENST00000505065 MAGEA6P43360 314 aa8.5□□□□□ -1.05
CDC42SE2-208ENST00000505065 IL10RBQ08334 325 aa8.5□□□□□ -1.05
CDC42SE2-208ENST00000505065 GAS6Q14393 721 aa8.5□□□□□ -1.05
CDC42SE2-208ENST00000505065 GEN1Q17RS7 908 aa8.5□□□□□ -1.05
CDC42SE2-208ENST00000505065 PLEKHG6Q3KR16 790 aa8.5□□□□□ -1.05
CDC42SE2-208ENST00000505065 ZNF528Q3MIS6 628 aa8.5□□□□□ -1.05
CDC42SE2-208ENST00000505065 DAAM2Q86T65 1068 aa8.5□□□□□ -1.05
CDC42SE2-208ENST00000505065 NELL2Q99435 816 aa8.5□□□□□ -1.05
CDC42SE2-208ENST00000505065 C19orf43Q9BQ61 176 aa8.5□□□□□ -1.05
CDC42SE2-208ENST00000505065 FBRSQ9HAH7 460 aa8.5□□□□□ -1.05
CDC42SE2-208ENST00000505065 AMFRQ9UKV5 643 aa8.5□□□□□ -1.05
CDC42SE2-208ENST00000505065 A0A1W2PQF6 199 aa8.49□□□□□ -1.05
CDC42SE2-208ENST00000505065 NCAM2O15394 837 aa8.49□□□□□ -1.05
CDC42SE2-208ENST00000505065 ZFXP17010 805 aaPredicted RBP8.49□□□□□ -1.05
CDC42SE2-208ENST00000505065 TARSP26639 723 aaKnown RBP8.49□□□□□ -1.05
CDC42SE2-208ENST00000505065 COPAP53621 1224 aa8.49□□□□□ -1.05
CDC42SE2-208ENST00000505065 RWDD2BP57060 319 aa8.49□□□□□ -1.05
CDC42SE2-208ENST00000505065 RNASE9P60153 205 aaKnown RBP8.49□□□□□ -1.05
CDC42SE2-208ENST00000505065 NSUN2Q08J23 767 aaKnown RBP eCLIP8.49□□□□□ -1.05
CDC42SE2-208ENST00000505065 MMRN1Q13201 1228 aa8.49□□□□□ -1.05
CDC42SE2-208ENST00000505065 C6orf118Q5T5N4 469 aa8.49□□□□□ -1.05
CDC42SE2-208ENST00000505065 TMA16Q96EY4 203 aaKnown RBP8.49□□□□□ -1.05
CDC42SE2-208ENST00000505065 PBKQ96KB5 322 aa8.49□□□□□ -1.05
CDC42SE2-208ENST00000505065 USP29Q9HBJ7 922 aa8.49□□□□□ -1.05
CDC42SE2-208ENST00000505065 VANGL2Q9ULK5 521 aa8.49□□□□□ -1.05
CDC42SE2-208ENST00000505065 PIAS3Q9Y6X2 628 aa8.49□□□□□ -1.05
CDC42SE2-208ENST00000505065 COL5A1P20908 1838 aaPredicted RBP8.49□□□□□ -1.05
CDC42SE2-208ENST00000505065 EEF2KO00418 725 aaKnown RBP8.49□□□□□ -1.05
CDC42SE2-208ENST00000505065 GSRP00390 522 aa8.49□□□□□ -1.05
CDC42SE2-208ENST00000505065 GNA12Q03113 381 aa8.49□□□□□ -1.05
CDC42SE2-208ENST00000505065 IHHQ14623 411 aa8.49□□□□□ -1.05
CDC42SE2-208ENST00000505065 E2F5Q15329 346 aa8.49□□□□□ -1.05
CDC42SE2-208ENST00000505065 CDO1Q16878 200 aa8.49□□□□□ -1.05
CDC42SE2-208ENST00000505065 CBARPQ8N350 705 aaPredicted RBP8.49□□□□□ -1.05
CDC42SE2-208ENST00000505065 SH2D3CQ8N5H7 860 aa8.49□□□□□ -1.05
CDC42SE2-208ENST00000505065 P2RY13Q9BPV8 354 aa8.49□□□□□ -1.05
CDC42SE2-208ENST00000505065 MGME1Q9BQP7 344 aa8.49□□□□□ -1.05
CDC42SE2-208ENST00000505065 SLC39A8Q9C0K1 460 aa8.49□□□□□ -1.05
CDC42SE2-208ENST00000505065 ZWILCHQ9H900 591 aa8.49□□□□□ -1.05
CDC42SE2-208ENST00000505065 DONSONQ9NYP3 566 aa8.49□□□□□ -1.05
CDC42SE2-208ENST00000505065 K7ESF4 209 aa8.49□□□□□ -1.05
CDC42SE2-208ENST00000505065 MFSD11O43934 449 aa8.49□□□□□ -1.05
CDC42SE2-208ENST00000505065 EGFP01133 1207 aa8.49□□□□□ -1.05
CDC42SE2-208ENST00000505065 IRF1P10914 325 aa8.49□□□□□ -1.05
CDC42SE2-208ENST00000505065 PABPC1P11940 636 aaKnown RBP8.49□□□□□ -1.05
CDC42SE2-208ENST00000505065 AOC1P19801 751 aa8.49□□□□□ -1.05
CDC42SE2-208ENST00000505065 GARSP41250 739 aaKnown RBP8.49□□□□□ -1.05
CDC42SE2-208ENST00000505065 SULT2A1Q06520 285 aa8.49□□□□□ -1.05
CDC42SE2-208ENST00000505065 APCDD1Q8J025 514 aa8.49□□□□□ -1.05
CDC42SE2-208ENST00000505065 ECHDC3Q96DC8 303 aa8.49□□□□□ -1.05
CDC42SE2-208ENST00000505065 COL25A1Q9BXS0 654 aaPredicted RBP8.49□□□□□ -1.05
CDC42SE2-208ENST00000505065 HEBP1Q9NRV9 189 aa8.49□□□□□ -1.05
CDC42SE2-208ENST00000505065 GPATCH2LQ9NWQ4 482 aa8.49□□□□□ -1.05
CDC42SE2-208ENST00000505065 VCANP13611 3396 aa8.49□□□□□ -1.05
CDC42SE2-208ENST00000505065 CCDC163A0A0D9SF12 145 aa8.48□□□□□ -1.05
CDC42SE2-208ENST00000505065 TNFRSF10AO00220 468 aa8.48□□□□□ -1.05
CDC42SE2-208ENST00000505065 ATP1A1P05023 1023 aaKnown RBP8.48□□□□□ -1.05
CDC42SE2-208ENST00000505065 MMP2P08253 660 aa8.48□□□□□ -1.05
CDC42SE2-208ENST00000505065 ETFBP38117 255 aa8.48□□□□□ -1.05
CDC42SE2-208ENST00000505065 VCPP55072 806 aaKnown RBP8.48□□□□□ -1.05
CDC42SE2-208ENST00000505065 NR1H3Q13133 447 aa8.48□□□□□ -1.05
CDC42SE2-208ENST00000505065 MSLNQ13421 630 aaPredicted RBP8.48□□□□□ -1.05
CDC42SE2-208ENST00000505065 KCNT1Q5JUK3 1230 aa8.48□□□□□ -1.05
CDC42SE2-208ENST00000505065 ARMC3Q5W041 872 aa8.48□□□□□ -1.05
CDC42SE2-208ENST00000505065 GRAMD4Q6IC98 578 aa8.48□□□□□ -1.05
CDC42SE2-208ENST00000505065 CHSY1Q86X52 802 aa8.48□□□□□ -1.05
CDC42SE2-208ENST00000505065 PPM1EQ8WY54 764 aa8.48□□□□□ -1.05
CDC42SE2-208ENST00000505065 ANP32BQ92688 251 aaKnown RBP8.48□□□□□ -1.05
CDC42SE2-208ENST00000505065 XPO6Q96QU8 1125 aaKnown RBP8.48□□□□□ -1.05
CDC42SE2-208ENST00000505065 BRD9Q9H8M2 597 aa8.48□□□□□ -1.05
CDC42SE2-208ENST00000505065 EBF1Q9UH73 591 aa8.48□□□□□ -1.05
CDC42SE2-208ENST00000505065 DRG1Q9Y295 367 aaKnown RBP8.48□□□□□ -1.05
CDC42SE2-208ENST00000505065 ZNF318Q5VUA4 2279 aa8.48□□□□□ -1.05
CDC42SE2-208ENST00000505065 TARSL2A2RTX5 802 aaKnown RBP8.48□□□□□ -1.05
CDC42SE2-208ENST00000505065 ZSCAN5CA6NGD5 496 aaPredicted RBP8.48□□□□□ -1.05
CDC42SE2-208ENST00000505065 IPO7O95373 1038 aaKnown RBP8.48□□□□□ -1.05
CDC42SE2-208ENST00000505065 DESP17661 470 aa8.48□□□□□ -1.05
CDC42SE2-208ENST00000505065 MZF1P28698 734 aaPredicted RBP8.48□□□□□ -1.05
CDC42SE2-208ENST00000505065 CSKP41240 450 aa8.48□□□□□ -1.05
CDC42SE2-208ENST00000505065 DGKGP49619 791 aa8.48□□□□□ -1.05
CDC42SE2-208ENST00000505065 SERPINH1P50454 418 aaKnown RBP8.48□□□□□ -1.05
CDC42SE2-208ENST00000505065 CYTH1Q15438 398 aa8.48□□□□□ -1.05
CDC42SE2-208ENST00000505065 SYT13Q7L8C5 426 aa8.48□□□□□ -1.05
CDC42SE2-208ENST00000505065 RAVER1Q8IY67 606 aaKnown RBP8.48□□□□□ -1.05
CDC42SE2-208ENST00000505065 SLC35F6Q8N357 371 aa8.48□□□□□ -1.05
CDC42SE2-208ENST00000505065 NECAB3Q96P71 396 aaPredicted RBP8.48□□□□□ -1.05
CDC42SE2-208ENST00000505065 BBS2Q9BXC9 721 aa8.48□□□□□ -1.05
CDC42SE2-208ENST00000505065 CPEB1Q9BZB8 566 aaKnown RBP8.48□□□□□ -1.05
CDC42SE2-208ENST00000505065 DMDP11532 3685 aa8.48□□□□□ -1.05
CDC42SE2-208ENST00000505065 FZD6O60353 706 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms