RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 SLC6A4P31645 630 aa9.6□□□□□ -0.87
TPM3-218ENST00000505010 RPL21P46778 160 aaKnown RBP9.6□□□□□ -0.87
TPM3-218ENST00000505010 GDF10P55107 478 aa9.6□□□□□ -0.87
TPM3-218ENST00000505010 SLC10A2Q12908 348 aaPredicted RBP9.6□□□□□ -0.87
TPM3-218ENST00000505010 XRCC4Q13426 336 aa9.6□□□□□ -0.87
TPM3-218ENST00000505010 CUL1Q13616 776 aa9.6□□□□□ -0.87
TPM3-218ENST00000505010 BRD3Q15059 726 aa9.6□□□□□ -0.87
TPM3-218ENST00000505010 PDK1Q15118 436 aa9.6□□□□□ -0.87
TPM3-218ENST00000505010 SLC45A4Q5BKX6 768 aa9.6□□□□□ -0.87
TPM3-218ENST00000505010 FAM133BQ5BKY9 247 aaKnown RBP9.6□□□□□ -0.87
TPM3-218ENST00000505010 PRSS36Q5K4E3 855 aa9.6□□□□□ -0.87
TPM3-218ENST00000505010 RABGAP1LQ5R372 815 aa9.6□□□□□ -0.87
TPM3-218ENST00000505010 RARS2Q5T160 578 aaKnown RBP9.6□□□□□ -0.87
TPM3-218ENST00000505010 ACBD5Q5T8D3 534 aaPredicted RBP9.6□□□□□ -0.87
TPM3-218ENST00000505010 FBXL22Q6P050 247 aa9.6□□□□□ -0.87
TPM3-218ENST00000505010 WDR93Q6P2C0 686 aa9.6□□□□□ -0.87
TPM3-218ENST00000505010 RFWD3Q6PCD5 774 aa9.6□□□□□ -0.87
TPM3-218ENST00000505010 FBXO38Q6PIJ6 1188 aa9.6□□□□□ -0.87
TPM3-218ENST00000505010 TFAP2DQ7Z6R9 452 aa9.6□□□□□ -0.87
TPM3-218ENST00000505010 PRUNE1Q86TP1 453 aa9.6□□□□□ -0.87
TPM3-218ENST00000505010 CIR1Q86X95 450 aaPredicted RBP9.6□□□□□ -0.87
TPM3-218ENST00000505010 DDX42Q86XP3 938 aaKnown RBP eCLIP9.6□□□□□ -0.87
TPM3-218ENST00000505010 ZNF683Q8IZ20 524 aa9.6□□□□□ -0.87
TPM3-218ENST00000505010 DCLK2Q8N568 766 aa9.6□□□□□ -0.87
TPM3-218ENST00000505010 RTL3Q8N8U3 475 aaKnown RBP9.6□□□□□ -0.87
TPM3-218ENST00000505010 FAM71DQ8N9W8 422 aa9.6□□□□□ -0.87
TPM3-218ENST00000505010 TFB1MQ8WVM0 346 aaKnown RBP9.6□□□□□ -0.87
TPM3-218ENST00000505010 ING5Q8WYH8 240 aa9.6□□□□□ -0.87
TPM3-218ENST00000505010 ANKRD7Q92527 254 aa9.6□□□□□ -0.87
TPM3-218ENST00000505010 IGSF8Q969P0 613 aa9.6□□□□□ -0.87
TPM3-218ENST00000505010 CELF6Q96J87 481 aaKnown RBP9.6□□□□□ -0.87
TPM3-218ENST00000505010 PRMT1Q99873 361 aaKnown RBP9.6□□□□□ -0.87
TPM3-218ENST00000505010 DDX50Q9BQ39 737 aaKnown RBP9.6□□□□□ -0.87
TPM3-218ENST00000505010 SLC46A2Q9BY10 475 aa9.6□□□□□ -0.87
TPM3-218ENST00000505010 SMG9Q9H0W8 520 aaKnown RBP9.6□□□□□ -0.87
TPM3-218ENST00000505010 PCDH9Q9HC56 1237 aa9.6□□□□□ -0.87
TPM3-218ENST00000505010 FAM114A2Q9NRY5 505 aa9.6□□□□□ -0.87
TPM3-218ENST00000505010 CFAP97Q9P2B7 532 aa9.6□□□□□ -0.87
TPM3-218ENST00000505010 PPARGC1AQ9UBK2 798 aaKnown RBP9.6□□□□□ -0.87
TPM3-218ENST00000505010 AGO1Q9UL18 857 aaKnown RBP9.6□□□□□ -0.87
TPM3-218ENST00000505010 DUSP12Q9UNI6 340 aa9.6□□□□□ -0.87
TPM3-218ENST00000505010 MRPS23Q9Y3D9 190 aaKnown RBP9.6□□□□□ -0.87
TPM3-218ENST00000505010 SH3BP1Q9Y3L3 701 aa9.6□□□□□ -0.87
TPM3-218ENST00000505010 RAD54BQ9Y620 910 aa9.6□□□□□ -0.87
TPM3-218ENST00000505010 DENND4AQ7Z401 1863 aa9.59□□□□□ -0.87
TPM3-218ENST00000505010 IGLV3-10A0A075B6K4 115 aa9.59□□□□□ -0.87
TPM3-218ENST00000505010 HACD1B0YJ81 288 aa9.59□□□□□ -0.87
TPM3-218ENST00000505010 DFFAO00273 331 aa9.59□□□□□ -0.87
TPM3-218ENST00000505010 ZNF197O14709 1029 aa9.59□□□□□ -0.87
TPM3-218ENST00000505010 TRDMT1O14717 391 aaKnown RBP9.59□□□□□ -0.87
TPM3-218ENST00000505010 TSPAN3O60637 253 aa9.59□□□□□ -0.87
TPM3-218ENST00000505010 CNTN5O94779 1100 aa9.59□□□□□ -0.87
TPM3-218ENST00000505010 STK10O94804 968 aaKnown RBP9.59□□□□□ -0.87
TPM3-218ENST00000505010 LATS1O95835 1130 aa9.59□□□□□ -0.87
TPM3-218ENST00000505010 ZSCAN5DPP0CG00 497 aa9.59□□□□□ -0.87
TPM3-218ENST00000505010 VAV1P15498 845 aa9.59□□□□□ -0.87
TPM3-218ENST00000505010 H2AFXP16104 143 aaPredicted RBP9.59□□□□□ -0.87
TPM3-218ENST00000505010 MX2P20592 715 aa9.59□□□□□ -0.87
TPM3-218ENST00000505010 RBL1P28749 1068 aa9.59□□□□□ -0.87
TPM3-218ENST00000505010 AVPR1AP37288 418 aa9.59□□□□□ -0.87
TPM3-218ENST00000505010 ADCY8P40145 1251 aa9.59□□□□□ -0.87
TPM3-218ENST00000505010 CARSP49589 748 aaKnown RBP9.59□□□□□ -0.87
TPM3-218ENST00000505010 GALNT2Q10471 571 aa9.59□□□□□ -0.87
TPM3-218ENST00000505010 AP1B1Q10567 949 aa9.59□□□□□ -0.87
TPM3-218ENST00000505010 GPS1Q13098 491 aa9.59□□□□□ -0.87
TPM3-218ENST00000505010 PRKD1Q15139 912 aaPredicted RBP9.59□□□□□ -0.87
TPM3-218ENST00000505010 TRADDQ15628 312 aa9.59□□□□□ -0.87
TPM3-218ENST00000505010 ST3GAL2Q16842 350 aa9.59□□□□□ -0.87
TPM3-218ENST00000505010 P3H1Q32P28 736 aa9.59□□□□□ -0.87
TPM3-218ENST00000505010 MAP9Q49MG5 647 aa9.59□□□□□ -0.87
TPM3-218ENST00000505010 ALFQ53S48 1182 aa9.59□□□□□ -0.87
TPM3-218ENST00000505010 DUPD1Q68J44 220 aa9.59□□□□□ -0.87
TPM3-218ENST00000505010 HEATR6Q6AI08 1181 aaKnown RBP9.59□□□□□ -0.87
TPM3-218ENST00000505010 OTOP3Q7RTS5 596 aa9.59□□□□□ -0.87
TPM3-218ENST00000505010 TP53INP2Q8IXH6 220 aa9.59□□□□□ -0.87
TPM3-218ENST00000505010 CMTM8Q8IZV2 173 aa9.59□□□□□ -0.87
TPM3-218ENST00000505010 CFAP52Q8N1V2 620 aa9.59□□□□□ -0.87
TPM3-218ENST00000505010 TAB3Q8N5C8 712 aaPredicted RBP9.59□□□□□ -0.87
TPM3-218ENST00000505010 ATPAF2Q8N5M1 289 aa9.59□□□□□ -0.87
TPM3-218ENST00000505010 GLIS1Q8NBF1 620 aa9.59□□□□□ -0.87
TPM3-218ENST00000505010 CCNYQ8ND76 341 aa9.59□□□□□ -0.87
TPM3-218ENST00000505010 CCHCR1Q8TD31 782 aa9.59□□□□□ -0.87
TPM3-218ENST00000505010 AZIN2Q96A70 460 aa9.59□□□□□ -0.87
TPM3-218ENST00000505010 MYEOVQ96EZ4 313 aa9.59□□□□□ -0.87
TPM3-218ENST00000505010 SNF8Q96H20 258 aa9.59□□□□□ -0.87
TPM3-218ENST00000505010 PRICKLE1Q96MT3 831 aaPredicted RBP9.59□□□□□ -0.87
TPM3-218ENST00000505010 LGMNQ99538 433 aa9.59□□□□□ -0.87
TPM3-218ENST00000505010 FERMT1Q9BQL6 677 aa9.59□□□□□ -0.87
TPM3-218ENST00000505010 TASP1Q9H6P5 420 aa9.59□□□□□ -0.87
TPM3-218ENST00000505010 KCNK12Q9HB15 430 aa9.59□□□□□ -0.87
TPM3-218ENST00000505010 SEPT10Q9P0V9 454 aa9.59□□□□□ -0.87
TPM3-218ENST00000505010 NFU1Q9UMS0 254 aa9.59□□□□□ -0.87
TPM3-218ENST00000505010 ARHGAP26Q9UNA1 814 aa9.59□□□□□ -0.87
TPM3-218ENST00000505010 SPTBN2O15020 2390 aa9.59□□□□□ -0.87
TPM3-218ENST00000505010 CHD5Q8TDI0 1954 aa9.59□□□□□ -0.87
TPM3-218ENST00000505010 OTOGLQ3ZCN5 2332 aa9.59□□□□□ -0.87
TPM3-218ENST00000505010 BCLAF3A2AJT9 711 aaKnown RBP9.58□□□□□ -0.88
TPM3-218ENST00000505010 TYW5A2RUC4 315 aaKnown RBP9.58□□□□□ -0.88
TPM3-218ENST00000505010 CCDC151A5D8V7 595 aa9.58□□□□□ -0.88
TPM3-218ENST00000505010 DRGXA6NNA5 263 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms