RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 CEP76Q8TAP6 659 aa10.11□□□□□ -0.79
NR1I3-220ENST00000505005 ZNF564Q8TBZ8 553 aaPredicted RBP10.11□□□□□ -0.79
NR1I3-220ENST00000505005 NSMCE1Q8WV22 266 aa10.11□□□□□ -0.79
NR1I3-220ENST00000505005 HMGB4Q8WW32 186 aa10.11□□□□□ -0.79
NR1I3-220ENST00000505005 OR8D1Q8WZ84 308 aa10.11□□□□□ -0.79
NR1I3-220ENST00000505005 EZH1Q92800 747 aaPredicted RBP10.11□□□□□ -0.79
NR1I3-220ENST00000505005 ISG20Q96AZ6 181 aaKnown RBP10.11□□□□□ -0.79
NR1I3-220ENST00000505005 SKA1Q96BD8 255 aa10.11□□□□□ -0.79
NR1I3-220ENST00000505005 PPP1R16AQ96I34 528 aa10.11□□□□□ -0.79
NR1I3-220ENST00000505005 PRICKLE1Q96MT3 831 aaPredicted RBP10.11□□□□□ -0.79
NR1I3-220ENST00000505005 NUP85Q9BW27 656 aa10.11□□□□□ -0.79
NR1I3-220ENST00000505005 SGK2Q9HBY8 427 aa10.11□□□□□ -0.79
NR1I3-220ENST00000505005 ZDHHC4Q9NPG8 344 aa10.11□□□□□ -0.79
NR1I3-220ENST00000505005 ITM2CQ9NQX7 267 aa10.11□□□□□ -0.79
NR1I3-220ENST00000505005 ANAPC7Q9UJX3 599 aa10.11□□□□□ -0.79
NR1I3-220ENST00000505005 HS3ST2Q9Y278 367 aa10.11□□□□□ -0.79
NR1I3-220ENST00000505005 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.11□□□□□ -0.79
NR1I3-220ENST00000505005 ATG2BQ96BY7 2078 aa10.11□□□□□ -0.79
NR1I3-220ENST00000505005 A0A0A6YYK5 440 aaPredicted RBP10.1□□□□□ -0.79
NR1I3-220ENST00000505005 ARHGAP42A6NI28 874 aa10.1□□□□□ -0.79
NR1I3-220ENST00000505005 PRR5-ARHGAP8B1AHC4 643 aa10.1□□□□□ -0.79
NR1I3-220ENST00000505005 SLC7A4O43246 635 aa10.1□□□□□ -0.79
NR1I3-220ENST00000505005 ATP9BO43861 1147 aa10.1□□□□□ -0.79
NR1I3-220ENST00000505005 GFRA3O60609 400 aa10.1□□□□□ -0.79
NR1I3-220ENST00000505005 LRIG2O94898 1065 aa10.1□□□□□ -0.79
NR1I3-220ENST00000505005 PRNPP04156 253 aa10.1□□□□□ -0.79
NR1I3-220ENST00000505005 GNSP15586 552 aa10.1□□□□□ -0.79
NR1I3-220ENST00000505005 C5AR1P21730 350 aa10.1□□□□□ -0.79
NR1I3-220ENST00000505005 CD70P32970 193 aa10.1□□□□□ -0.79
NR1I3-220ENST00000505005 CETN2P41208 172 aa10.1□□□□□ -0.79
NR1I3-220ENST00000505005 P2RY2P41231 377 aa10.1□□□□□ -0.79
NR1I3-220ENST00000505005 IL12RB1P42701 662 aa10.1□□□□□ -0.79
NR1I3-220ENST00000505005 MAGEA1P43355 309 aa10.1□□□□□ -0.79
NR1I3-220ENST00000505005 ADKP55263 362 aaKnown RBP10.1□□□□□ -0.79
NR1I3-220ENST00000505005 PITX1P78337 314 aaPredicted RBP10.1□□□□□ -0.79
NR1I3-220ENST00000505005 ARHGAP8P85298 464 aa10.1□□□□□ -0.79
NR1I3-220ENST00000505005 GNA12Q03113 381 aa10.1□□□□□ -0.79
NR1I3-220ENST00000505005 RFTN1Q14699 578 aaPredicted RBP10.1□□□□□ -0.79
NR1I3-220ENST00000505005 ASTE1Q2TB18 679 aaPredicted RBP10.1□□□□□ -0.79
NR1I3-220ENST00000505005 ACCSLQ4AC99 568 aa10.1□□□□□ -0.79
NR1I3-220ENST00000505005 HS1BP3Q53T59 392 aa10.1□□□□□ -0.79
NR1I3-220ENST00000505005 EMC10Q5UCC4 262 aa10.1□□□□□ -0.79
NR1I3-220ENST00000505005 HEATR6Q6AI08 1181 aaKnown RBP10.1□□□□□ -0.79
NR1I3-220ENST00000505005 IL31Q6EBC2 164 aa10.1□□□□□ -0.79
NR1I3-220ENST00000505005 PRR23BQ6ZRT6 265 aa10.1□□□□□ -0.79
NR1I3-220ENST00000505005 POLNQ7Z5Q5 900 aa10.1□□□□□ -0.79
NR1I3-220ENST00000505005 PCDH20Q8N6Y1 951 aaKnown RBP10.1□□□□□ -0.79
NR1I3-220ENST00000505005 RTL3Q8N8U3 475 aaKnown RBP10.1□□□□□ -0.79
NR1I3-220ENST00000505005 CCDC112Q8NEF3 446 aa10.1□□□□□ -0.79
NR1I3-220ENST00000505005 RFFLQ8WZ73 363 aa10.1□□□□□ -0.79
NR1I3-220ENST00000505005 IGSF8Q969P0 613 aa10.1□□□□□ -0.79
NR1I3-220ENST00000505005 LMLNQ96KR4 655 aa10.1□□□□□ -0.79
NR1I3-220ENST00000505005 HHIPQ96QV1 700 aa10.1□□□□□ -0.79
NR1I3-220ENST00000505005 HINFPQ9BQA5 517 aa10.1□□□□□ -0.79
NR1I3-220ENST00000505005 THAP2Q9H0W7 228 aa10.1□□□□□ -0.79
NR1I3-220ENST00000505005 ATP13A1Q9HD20 1204 aa10.1□□□□□ -0.79
NR1I3-220ENST00000505005 DYRK4Q9NR20 520 aa10.1□□□□□ -0.79
NR1I3-220ENST00000505005 CACNA2D2Q9NY47 1150 aa10.1□□□□□ -0.79
NR1I3-220ENST00000505005 TAS2R14Q9NYV8 317 aa10.1□□□□□ -0.79
NR1I3-220ENST00000505005 FZD4Q9ULV1 537 aa10.1□□□□□ -0.79
NR1I3-220ENST00000505005 AP4E1Q9UPM8 1137 aa10.1□□□□□ -0.79
NR1I3-220ENST00000505005 SMG5Q9UPR3 1016 aaKnown RBP10.1□□□□□ -0.79
NR1I3-220ENST00000505005 DOCK4Q8N1I0 1966 aa10.1□□□□□ -0.79
NR1I3-220ENST00000505005 A0A1W2PQ67 120 aa10.09□□□□□ -0.79
NR1I3-220ENST00000505005 A0A1W2PQF6 199 aa10.09□□□□□ -0.79
NR1I3-220ENST00000505005 PRR23AA6NEV1 266 aa10.09□□□□□ -0.79
NR1I3-220ENST00000505005 ZNF487B1APH4 448 aa10.09□□□□□ -0.79
NR1I3-220ENST00000505005 EEF2KO00418 725 aaKnown RBP10.09□□□□□ -0.79
NR1I3-220ENST00000505005 MCF2LO15068 1137 aa10.09□□□□□ -0.79
NR1I3-220ENST00000505005 CREB3O43889 395 aa10.09□□□□□ -0.79
NR1I3-220ENST00000505005 ADAM23O75077 832 aa10.09□□□□□ -0.79
NR1I3-220ENST00000505005 MTA2O94776 668 aa10.09□□□□□ -0.79
NR1I3-220ENST00000505005 PROSCO94903 275 aa10.09□□□□□ -0.79
NR1I3-220ENST00000505005 LCA5LO95447 670 aa10.09□□□□□ -0.79
NR1I3-220ENST00000505005 IGLV3-19P01714 112 aa10.09□□□□□ -0.79
NR1I3-220ENST00000505005 ZFXP17010 805 aaPredicted RBP10.09□□□□□ -0.79
NR1I3-220ENST00000505005 CD6P30203 668 aa10.09□□□□□ -0.79
NR1I3-220ENST00000505005 MIPP30301 263 aa10.09□□□□□ -0.79
NR1I3-220ENST00000505005 MAPK8P45983 427 aa10.09□□□□□ -0.79
NR1I3-220ENST00000505005 RENBPP51606 427 aa10.09□□□□□ -0.79
NR1I3-220ENST00000505005 SUOXP51687 545 aa10.09□□□□□ -0.79
NR1I3-220ENST00000505005 HADHBP55084 474 aaKnown RBP10.09□□□□□ -0.79
NR1I3-220ENST00000505005 SNRPD1P62314 119 aaKnown RBP10.09□□□□□ -0.79
NR1I3-220ENST00000505005 GFPT1Q06210 699 aaPredicted RBP10.09□□□□□ -0.79
NR1I3-220ENST00000505005 DPYSL2Q16555 572 aa10.09□□□□□ -0.79
NR1I3-220ENST00000505005 FUT11Q495W5 492 aa10.09□□□□□ -0.79
NR1I3-220ENST00000505005 MANEALQ5VSG8 457 aa10.09□□□□□ -0.79
NR1I3-220ENST00000505005 LRRC38Q5VT99 294 aa10.09□□□□□ -0.79
NR1I3-220ENST00000505005 OTUD1Q5VV17 481 aaPredicted RBP10.09□□□□□ -0.79
NR1I3-220ENST00000505005 E4F1Q66K89 784 aaPredicted RBP10.09□□□□□ -0.79
NR1I3-220ENST00000505005 CXorf57Q6NSI4 855 aaKnown RBP10.09□□□□□ -0.79
NR1I3-220ENST00000505005 TSSK4Q6SA08 328 aa10.09□□□□□ -0.79
NR1I3-220ENST00000505005 TMEM92Q6UXU6 159 aa10.09□□□□□ -0.79
NR1I3-220ENST00000505005 ZNF683Q8IZ20 524 aa10.09□□□□□ -0.79
NR1I3-220ENST00000505005 UMODL1-AS1Q8N2C9 162 aa10.09□□□□□ -0.79
NR1I3-220ENST00000505005 SH2D3CQ8N5H7 860 aa10.09□□□□□ -0.79
NR1I3-220ENST00000505005 TC2NQ8N9U0 490 aa10.09□□□□□ -0.79
NR1I3-220ENST00000505005 ATP11CQ8NB49 1132 aa10.09□□□□□ -0.79
NR1I3-220ENST00000505005 TMIEQ8NEW7 156 aa10.09□□□□□ -0.79
NR1I3-220ENST00000505005 MDGA1Q8NFP4 955 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms