RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 S1PR5Q9H228 398 aa10.66□□□□□ -0.7
TPM3-217ENST00000504663 PDFQ9HBH1 243 aa10.66□□□□□ -0.7
TPM3-217ENST00000504663 CFAP97Q9P2B7 532 aa10.66□□□□□ -0.7
TPM3-217ENST00000504663 ASIC3Q9UHC3 531 aa10.66□□□□□ -0.7
TPM3-217ENST00000504663 UTP11Q9Y3A2 253 aaKnown RBP10.66□□□□□ -0.7
TPM3-217ENST00000504663 MYO9BQ13459 2157 aa10.66□□□□□ -0.7
TPM3-217ENST00000504663 MYOFQ9NZM1 2061 aa10.65□□□□□ -0.7
TPM3-217ENST00000504663 A0A1W2PPC1 479 aa10.65□□□□□ -0.7
TPM3-217ENST00000504663 RASA4BC9J798 803 aa10.65□□□□□ -0.7
TPM3-217ENST00000504663 HAX1O00165 279 aa10.65□□□□□ -0.7
TPM3-217ENST00000504663 RNF103O00237 685 aa10.65□□□□□ -0.7
TPM3-217ENST00000504663 PPP1R12AO14974 1030 aaPredicted RBP10.65□□□□□ -0.7
TPM3-217ENST00000504663 RASA4O43374 803 aa10.65□□□□□ -0.7
TPM3-217ENST00000504663 CACNG3O60359 315 aa10.65□□□□□ -0.7
TPM3-217ENST00000504663 IFNB1P01574 187 aa10.65□□□□□ -0.7
TPM3-217ENST00000504663 STIP1P31948 543 aaKnown RBP10.65□□□□□ -0.7
TPM3-217ENST00000504663 ACVRL1P37023 503 aa10.65□□□□□ -0.7
TPM3-217ENST00000504663 MAPKAPK2P49137 400 aa10.65□□□□□ -0.7
TPM3-217ENST00000504663 SLC11A2P49281 568 aa10.65□□□□□ -0.7
TPM3-217ENST00000504663 PAPOLAP51003 745 aaKnown RBP10.65□□□□□ -0.7
TPM3-217ENST00000504663 NDST2P52849 883 aa10.65□□□□□ -0.7
TPM3-217ENST00000504663 CDH4P55283 916 aa10.65□□□□□ -0.7
TPM3-217ENST00000504663 IFI35P80217 286 aaPredicted RBP10.65□□□□□ -0.7
TPM3-217ENST00000504663 ZNF33AQ06730 810 aa10.65□□□□□ -0.7
TPM3-217ENST00000504663 TNK2Q07912 1038 aa10.65□□□□□ -0.7
TPM3-217ENST00000504663 GPS1Q13098 491 aa10.65□□□□□ -0.7
TPM3-217ENST00000504663 CBLBQ13191 982 aa10.65□□□□□ -0.7
TPM3-217ENST00000504663 IHHQ14623 411 aa10.65□□□□□ -0.7
TPM3-217ENST00000504663 GRIN2CQ14957 1233 aa10.65□□□□□ -0.7
TPM3-217ENST00000504663 SKIV2LQ15477 1246 aaKnown RBP10.65□□□□□ -0.7
TPM3-217ENST00000504663 RARS2Q5T160 578 aaKnown RBP10.65□□□□□ -0.7
TPM3-217ENST00000504663 CCDC13Q8IYE1 715 aa10.65□□□□□ -0.7
TPM3-217ENST00000504663 ZNF567Q8N184 647 aa10.65□□□□□ -0.7
TPM3-217ENST00000504663 AGGF1Q8N302 714 aaeCLIP10.65□□□□□ -0.7
TPM3-217ENST00000504663 MREGQ8N565 214 aa10.65□□□□□ -0.7
TPM3-217ENST00000504663 CNTD1Q8N815 330 aa10.65□□□□□ -0.7
TPM3-217ENST00000504663 RSAD2Q8WXG1 361 aa10.65□□□□□ -0.7
TPM3-217ENST00000504663 IFT81Q8WYA0 676 aa10.65□□□□□ -0.7
TPM3-217ENST00000504663 FATE1Q969F0 183 aa10.65□□□□□ -0.7
TPM3-217ENST00000504663 ALG14Q96F25 216 aa10.65□□□□□ -0.7
TPM3-217ENST00000504663 IL12RB2Q99665 862 aa10.65□□□□□ -0.7
TPM3-217ENST00000504663 CEP41Q9BYV8 373 aa10.65□□□□□ -0.7
TPM3-217ENST00000504663 FAM129AQ9BZQ8 928 aa10.65□□□□□ -0.7
TPM3-217ENST00000504663 BRD8Q9H0E9 1235 aa10.65□□□□□ -0.7
TPM3-217ENST00000504663 DPP7Q9UHL4 492 aa10.65□□□□□ -0.7
TPM3-217ENST00000504663 SLC12A6Q9UHW9 1150 aa10.65□□□□□ -0.7
TPM3-217ENST00000504663 FEZ2Q9UHY8 353 aaPredicted RBP10.65□□□□□ -0.7
TPM3-217ENST00000504663 CLEC4EQ9ULY5 219 aa10.65□□□□□ -0.7
TPM3-217ENST00000504663 TBC1D30Q9Y2I9 924 aa10.65□□□□□ -0.7
TPM3-217ENST00000504663 OR51B4Q9Y5P0 310 aa10.65□□□□□ -0.7
TPM3-217ENST00000504663 MTCH2Q9Y6C9 303 aa10.65□□□□□ -0.7
TPM3-217ENST00000504663 MYO18AQ92614 2054 aaKnown RBP10.65□□□□□ -0.7
TPM3-217ENST00000504663 TMEM265A0A087WTH1 108 aa10.64□□□□□ -0.71
TPM3-217ENST00000504663 A0A0D9SEW6 157 aa10.64□□□□□ -0.71
TPM3-217ENST00000504663 A0A1B0GVM2 712 aa10.64□□□□□ -0.71
TPM3-217ENST00000504663 E2F8A0AVK6 867 aa10.64□□□□□ -0.71
TPM3-217ENST00000504663 TCAF2A6NFQ2 919 aa10.64□□□□□ -0.71
TPM3-217ENST00000504663 C19orf67A6NJJ6 358 aa10.64□□□□□ -0.71
TPM3-217ENST00000504663 KCNK1O00180 336 aa10.64□□□□□ -0.71
TPM3-217ENST00000504663 MAP2K7O14733 419 aa10.64□□□□□ -0.71
TPM3-217ENST00000504663 NCAM2O15394 837 aa10.64□□□□□ -0.71
TPM3-217ENST00000504663 TSPAN3O60637 253 aa10.64□□□□□ -0.71
TPM3-217ENST00000504663 CD160O95971 181 aa10.64□□□□□ -0.71
TPM3-217ENST00000504663 ITIH2P19823 946 aa10.64□□□□□ -0.71
TPM3-217ENST00000504663 MX2P20592 715 aa10.64□□□□□ -0.71
TPM3-217ENST00000504663 MCM3P25205 808 aa10.64□□□□□ -0.71
TPM3-217ENST00000504663 HSPA9P38646 679 aaKnown RBP10.64□□□□□ -0.71
TPM3-217ENST00000504663 PLTPP55058 493 aa10.64□□□□□ -0.71
TPM3-217ENST00000504663 SERINC3Q13530 473 aa10.64□□□□□ -0.71
TPM3-217ENST00000504663 SEMA5AQ13591 1074 aa10.64□□□□□ -0.71
TPM3-217ENST00000504663 DSG2Q14126 1118 aa10.64□□□□□ -0.71
TPM3-217ENST00000504663 CBX2Q14781 532 aaPredicted RBP10.64□□□□□ -0.71
TPM3-217ENST00000504663 FSCBQ5H9T9 825 aa10.64□□□□□ -0.71
TPM3-217ENST00000504663 ANKRD20A2Q5SQ80 823 aa10.64□□□□□ -0.71
TPM3-217ENST00000504663 FAXCQ5TGI0 409 aa10.64□□□□□ -0.71
TPM3-217ENST00000504663 ANKRD20A1Q5TYW2 823 aa10.64□□□□□ -0.71
TPM3-217ENST00000504663 ANKRD20A3Q5VUR7 823 aa10.64□□□□□ -0.71
TPM3-217ENST00000504663 FYB2Q5VWT5 728 aa10.64□□□□□ -0.71
TPM3-217ENST00000504663 EMBQ6PCB8 327 aa10.64□□□□□ -0.71
TPM3-217ENST00000504663 LRRC31Q6UY01 552 aa10.64□□□□□ -0.71
TPM3-217ENST00000504663 BZW1Q7L1Q6 419 aaKnown RBP10.64□□□□□ -0.71
TPM3-217ENST00000504663 GSTA5Q7RTV2 222 aa10.64□□□□□ -0.71
TPM3-217ENST00000504663 TMC3Q7Z5M5 1100 aa10.64□□□□□ -0.71
TPM3-217ENST00000504663 CCHCR1Q8TD31 782 aa10.64□□□□□ -0.71
TPM3-217ENST00000504663 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.64□□□□□ -0.71
TPM3-217ENST00000504663 ARHGEF2Q92974 986 aaKnown RBP10.64□□□□□ -0.71
TPM3-217ENST00000504663 ASIC4Q96FT7 647 aa10.64□□□□□ -0.71
TPM3-217ENST00000504663 MSLNLQ96KJ4 702 aa10.64□□□□□ -0.71
TPM3-217ENST00000504663 GDAP1L1Q96MZ0 367 aa10.64□□□□□ -0.71
TPM3-217ENST00000504663 REPIN1Q9BWE0 567 aaKnown RBP10.64□□□□□ -0.71
TPM3-217ENST00000504663 APOL5Q9BWW9 433 aa10.64□□□□□ -0.71
TPM3-217ENST00000504663 FUT8Q9BYC5 575 aa10.64□□□□□ -0.71
TPM3-217ENST00000504663 ACE2Q9BYF1 805 aaPredicted RBP10.64□□□□□ -0.71
TPM3-217ENST00000504663 IGFLR1Q9H665 355 aa10.64□□□□□ -0.71
TPM3-217ENST00000504663 RETREG1Q9H6L5 497 aa10.64□□□□□ -0.71
TPM3-217ENST00000504663 LMCD1Q9NZU5 365 aa10.64□□□□□ -0.71
TPM3-217ENST00000504663 PAK5Q9P286 719 aa10.64□□□□□ -0.71
TPM3-217ENST00000504663 IGSF9Q9P2J2 1179 aa10.64□□□□□ -0.71
TPM3-217ENST00000504663 TPX2Q9ULW0 747 aaKnown RBP10.64□□□□□ -0.71
TPM3-217ENST00000504663 COLQQ9Y215 455 aaPredicted RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms