RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 MACROD2A1Z1Q3 448 aa12.22□□□□□ -0.45
PDLIM5-208ENST00000504489 H3BRJ5 948 aa12.22□□□□□ -0.45
PDLIM5-208ENST00000504489 NPC1O15118 1278 aa12.22□□□□□ -0.45
PDLIM5-208ENST00000504489 PSTPIP1O43586 416 aa12.22□□□□□ -0.45
PDLIM5-208ENST00000504489 SPOPO43791 374 aa12.22□□□□□ -0.45
PDLIM5-208ENST00000504489 ATG13O75143 517 aa12.22□□□□□ -0.45
PDLIM5-208ENST00000504489 ASLP04424 464 aa12.22□□□□□ -0.45
PDLIM5-208ENST00000504489 ATP5BP06576 529 aaKnown RBP12.22□□□□□ -0.45
PDLIM5-208ENST00000504489 GOT1P17174 413 aa12.22□□□□□ -0.45
PDLIM5-208ENST00000504489 POLR2EP19388 210 aaKnown RBP12.22□□□□□ -0.45
PDLIM5-208ENST00000504489 MZF1P28698 734 aaPredicted RBP12.22□□□□□ -0.45
PDLIM5-208ENST00000504489 ARL4AP40617 200 aa12.22□□□□□ -0.45
PDLIM5-208ENST00000504489 CSKP41240 450 aa12.22□□□□□ -0.45
PDLIM5-208ENST00000504489 CDH6P55285 790 aa12.22□□□□□ -0.45
PDLIM5-208ENST00000504489 GAS6Q14393 721 aa12.22□□□□□ -0.45
PDLIM5-208ENST00000504489 PDK2Q15119 407 aa12.22□□□□□ -0.45
PDLIM5-208ENST00000504489 PLEKHG6Q3KR16 790 aa12.22□□□□□ -0.45
PDLIM5-208ENST00000504489 FUT11Q495W5 492 aa12.22□□□□□ -0.45
PDLIM5-208ENST00000504489 ATP13A4Q4VNC1 1196 aa12.22□□□□□ -0.45
PDLIM5-208ENST00000504489 C2orf27AQ580R0 203 aa12.22□□□□□ -0.45
PDLIM5-208ENST00000504489 PITRM1Q5JRX3 1037 aa12.22□□□□□ -0.45
PDLIM5-208ENST00000504489 MBLAC2Q68D91 279 aa12.22□□□□□ -0.45
PDLIM5-208ENST00000504489 Q6ZS52 159 aa12.22□□□□□ -0.45
PDLIM5-208ENST00000504489 RFX8Q6ZV50 586 aa12.22□□□□□ -0.45
PDLIM5-208ENST00000504489 VSIG1Q86XK7 387 aa12.22□□□□□ -0.45
PDLIM5-208ENST00000504489 MAP7D3Q8IWC1 876 aa12.22□□□□□ -0.45
PDLIM5-208ENST00000504489 SPEM1Q8N4L4 309 aa12.22□□□□□ -0.45
PDLIM5-208ENST00000504489 LRRC57Q8N9N7 239 aa12.22□□□□□ -0.45
PDLIM5-208ENST00000504489 KIAA1524Q8TCG1 905 aa12.22□□□□□ -0.45
PDLIM5-208ENST00000504489 UBE2Q2Q8WVN8 375 aa12.22□□□□□ -0.45
PDLIM5-208ENST00000504489 ZNF830Q96NB3 372 aaPredicted RBP12.22□□□□□ -0.45
PDLIM5-208ENST00000504489 GOLPH3Q9H4A6 298 aa12.22□□□□□ -0.45
PDLIM5-208ENST00000504489 PPP2R2CQ9Y2T4 447 aa12.22□□□□□ -0.45
PDLIM5-208ENST00000504489 HYOU1Q9Y4L1 999 aa12.22□□□□□ -0.45
PDLIM5-208ENST00000504489 GRID2IPA4D2P6 1211 aa12.21□□□□□ -0.45
PDLIM5-208ENST00000504489 ANTXRLA6NF34 631 aa12.21□□□□□ -0.45
PDLIM5-208ENST00000504489 ZNF487B1APH4 448 aa12.21□□□□□ -0.45
PDLIM5-208ENST00000504489 DAPK3O43293 454 aa12.21□□□□□ -0.45
PDLIM5-208ENST00000504489 DLDP09622 509 aaKnown RBP12.21□□□□□ -0.45
PDLIM5-208ENST00000504489 ERCC2P18074 760 aa12.21□□□□□ -0.45
PDLIM5-208ENST00000504489 IL4RP24394 825 aa12.21□□□□□ -0.45
PDLIM5-208ENST00000504489 GJC1P36383 396 aa12.21□□□□□ -0.45
PDLIM5-208ENST00000504489 ETFBP38117 255 aa12.21□□□□□ -0.45
PDLIM5-208ENST00000504489 SEC13P55735 322 aa12.21□□□□□ -0.45
PDLIM5-208ENST00000504489 YBEYP58557 167 aaPredicted RBP12.21□□□□□ -0.45
PDLIM5-208ENST00000504489 GNA12Q03113 381 aa12.21□□□□□ -0.45
PDLIM5-208ENST00000504489 SULT2A1Q06520 285 aa12.21□□□□□ -0.45
PDLIM5-208ENST00000504489 DPYSQ14117 519 aa12.21□□□□□ -0.45
PDLIM5-208ENST00000504489 KRT81Q14533 505 aa12.21□□□□□ -0.45
PDLIM5-208ENST00000504489 RNF219Q5W0B1 726 aaPredicted RBP12.21□□□□□ -0.45
PDLIM5-208ENST00000504489 EGFLAMQ63HQ2 1017 aa12.21□□□□□ -0.45
PDLIM5-208ENST00000504489 TRMT11Q7Z4G4 463 aaKnown RBP12.21□□□□□ -0.45
PDLIM5-208ENST00000504489 APCDD1Q8J025 514 aa12.21□□□□□ -0.45
PDLIM5-208ENST00000504489 SYCE1Q8N0S2 351 aa12.21□□□□□ -0.45
PDLIM5-208ENST00000504489 UMODL1-AS1Q8N2C9 162 aa12.21□□□□□ -0.45
PDLIM5-208ENST00000504489 ZNF513Q8N8E2 541 aaPredicted RBP12.21□□□□□ -0.45
PDLIM5-208ENST00000504489 IL17RCQ8NAC3 791 aa12.21□□□□□ -0.45
PDLIM5-208ENST00000504489 DTWD2Q8NBA8 298 aa12.21□□□□□ -0.45
PDLIM5-208ENST00000504489 KCTD6Q8NC69 237 aa12.21□□□□□ -0.45
PDLIM5-208ENST00000504489 RPLP0P6Q8NHW5 317 aa12.21□□□□□ -0.45
PDLIM5-208ENST00000504489 ACDQ96AP0 544 aa12.21□□□□□ -0.45
PDLIM5-208ENST00000504489 CSPG4P5Q96PW8 444 aa12.21□□□□□ -0.45
PDLIM5-208ENST00000504489 CIPCQ9C0C6 399 aa12.21□□□□□ -0.45
PDLIM5-208ENST00000504489 MUC3BQ9H195 1237 aa12.21□□□□□ -0.45
PDLIM5-208ENST00000504489 MAGEH1Q9H213 219 aa12.21□□□□□ -0.45
PDLIM5-208ENST00000504489 NDFIP2Q9NV92 336 aa12.21□□□□□ -0.45
PDLIM5-208ENST00000504489 DDX56Q9NY93 547 aaKnown RBP12.21□□□□□ -0.45
PDLIM5-208ENST00000504489 THAP10Q9P2Z0 257 aaPredicted RBP12.21□□□□□ -0.45
PDLIM5-208ENST00000504489 DNAI1Q9UI46 699 aa12.21□□□□□ -0.45
PDLIM5-208ENST00000504489 GUCA1BQ9UMX6 200 aa12.21□□□□□ -0.45
PDLIM5-208ENST00000504489 THADAQ6YHU6 1953 aa12.21□□□□□ -0.46
PDLIM5-208ENST00000504489 RALGAPA1Q6GYQ0 2036 aa12.2□□□□□ -0.46
PDLIM5-208ENST00000504489 A0A0D9SEW6 157 aa12.2□□□□□ -0.46
PDLIM5-208ENST00000504489 DCLK1O15075 740 aa12.2□□□□□ -0.46
PDLIM5-208ENST00000504489 KLF8O95600 359 aaPredicted RBP12.2□□□□□ -0.46
PDLIM5-208ENST00000504489 CD48P09326 243 aa12.2□□□□□ -0.46
PDLIM5-208ENST00000504489 AMPD1P23109 780 aa12.2□□□□□ -0.46
PDLIM5-208ENST00000504489 KDELR1P24390 212 aa12.2□□□□□ -0.46
PDLIM5-208ENST00000504489 NTSR1P30989 418 aa12.2□□□□□ -0.46
PDLIM5-208ENST00000504489 NDST2P52849 883 aa12.2□□□□□ -0.46
PDLIM5-208ENST00000504489 ECT2LQ008S8 904 aa12.2□□□□□ -0.46
PDLIM5-208ENST00000504489 MTAPQ13126 283 aa12.2□□□□□ -0.46
PDLIM5-208ENST00000504489 ENPP2Q13822 863 aa12.2□□□□□ -0.46
PDLIM5-208ENST00000504489 DPYSL3Q14195 570 aa12.2□□□□□ -0.46
PDLIM5-208ENST00000504489 ZNF234Q14588 700 aa12.2□□□□□ -0.46
PDLIM5-208ENST00000504489 EOGTQ5NDL2 527 aa12.2□□□□□ -0.46
PDLIM5-208ENST00000504489 ZFYVE27Q5T4F4 411 aa12.2□□□□□ -0.46
PDLIM5-208ENST00000504489 PKN3Q6P5Z2 889 aa12.2□□□□□ -0.46
PDLIM5-208ENST00000504489 SYT13Q7L8C5 426 aa12.2□□□□□ -0.46
PDLIM5-208ENST00000504489 NT5DC3Q86UY8 548 aa12.2□□□□□ -0.46
PDLIM5-208ENST00000504489 LZTR1Q8N653 840 aa12.2□□□□□ -0.46
PDLIM5-208ENST00000504489 ALLCQ8N6M5 410 aa12.2□□□□□ -0.46
PDLIM5-208ENST00000504489 DCAF4L2Q8NA75 395 aa12.2□□□□□ -0.46
PDLIM5-208ENST00000504489 KDM1BQ8NB78 822 aa12.2□□□□□ -0.46
PDLIM5-208ENST00000504489 TXNDC5Q8NBS9 432 aaKnown RBP12.2□□□□□ -0.46
PDLIM5-208ENST00000504489 SORCS1Q8WY21 1168 aa12.2□□□□□ -0.46
PDLIM5-208ENST00000504489 RAPGEF5Q92565 580 aa12.2□□□□□ -0.46
PDLIM5-208ENST00000504489 ARHGEF2Q92974 986 aaKnown RBP12.2□□□□□ -0.46
PDLIM5-208ENST00000504489 FAF2Q96CS3 445 aa12.2□□□□□ -0.46
PDLIM5-208ENST00000504489 PSMB7Q99436 277 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms