RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 NBPF12Q5TAG4 269 aaPredicted RBP7.78□□□□□ -1.16
NEDD9-208ENST00000504387 ZNF280DQ6N043 979 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 C15orf39Q6ZRI6 1047 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 TMEM110Q86TL2 294 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 C4orf19Q8IY42 314 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 CENPSQ8N2Z9 138 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 RNF149Q8NC42 400 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 DDHD1Q8NEL9 900 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 BPIFB6Q8NFQ5 453 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 CLEC4DQ8WXI8 215 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 LPGAT1Q92604 370 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 ZNF669Q96BR6 464 aaPredicted RBP7.78□□□□□ -1.16
NEDD9-208ENST00000504387 ISOC1Q96CN7 298 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 FERMT1Q9BQL6 677 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 GPATCH1Q9BRR8 931 aaKnown RBP7.78□□□□□ -1.16
NEDD9-208ENST00000504387 CCDC28BQ9BUN5 200 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 GATA5Q9BWX5 397 aaPredicted RBP7.78□□□□□ -1.16
NEDD9-208ENST00000504387 MRPL46Q9H2W6 279 aaKnown RBP7.78□□□□□ -1.16
NEDD9-208ENST00000504387 RSAD1Q9HA92 442 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 PLGRKTQ9HBL7 147 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 POLE4Q9NR33 117 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 SNX15Q9NRS6 342 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 FAIMQ9NVQ4 179 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 SYBUQ9NX95 663 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 ZDHHC2Q9UIJ5 367 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 LAMB2P55268 1798 aa7.77□□□□□ -1.17
NEDD9-208ENST00000504387 A0A096LPK6 155 aa7.77□□□□□ -1.17
NEDD9-208ENST00000504387 FUOMA2VDF0 154 aa7.77□□□□□ -1.17
NEDD9-208ENST00000504387 TMEM247A6NEH6 219 aa7.77□□□□□ -1.17
NEDD9-208ENST00000504387 SOCS2O14508 198 aa7.77□□□□□ -1.17
NEDD9-208ENST00000504387 GLRA3O75311 464 aa7.77□□□□□ -1.17
NEDD9-208ENST00000504387 CES1P23141 567 aa7.77□□□□□ -1.17
NEDD9-208ENST00000504387 GRIA3P42263 894 aa7.77□□□□□ -1.17
NEDD9-208ENST00000504387 CASP2P42575 452 aa7.77□□□□□ -1.17
NEDD9-208ENST00000504387 OXCT1P55809 520 aa7.77□□□□□ -1.17
NEDD9-208ENST00000504387 POU5F1BQ06416 359 aa7.77□□□□□ -1.17
NEDD9-208ENST00000504387 ITGA7Q13683 1181 aa7.77□□□□□ -1.17
NEDD9-208ENST00000504387 NR1D2Q14995 579 aa7.77□□□□□ -1.17
NEDD9-208ENST00000504387 ZNF423Q2M1K9 1284 aa7.77□□□□□ -1.17
NEDD9-208ENST00000504387 NANOGP8Q6NSW7 305 aa7.77□□□□□ -1.17
NEDD9-208ENST00000504387 POTEAQ6S8J7 498 aa7.77□□□□□ -1.17
NEDD9-208ENST00000504387 BTLAQ7Z6A9 289 aa7.77□□□□□ -1.17
NEDD9-208ENST00000504387 SETD3Q86TU7 594 aaPredicted RBP7.77□□□□□ -1.17
NEDD9-208ENST00000504387 XYLT1Q86Y38 959 aa7.77□□□□□ -1.17
NEDD9-208ENST00000504387 ERI1Q8IV48 349 aaKnown RBP7.77□□□□□ -1.17
NEDD9-208ENST00000504387 SULF1Q8IWU6 871 aa7.77□□□□□ -1.17
NEDD9-208ENST00000504387 CXorf38Q8TB03 319 aa7.77□□□□□ -1.17
NEDD9-208ENST00000504387 DDI1Q8WTU0 396 aa7.77□□□□□ -1.17
NEDD9-208ENST00000504387 RNF157Q96PX1 679 aa7.77□□□□□ -1.17
NEDD9-208ENST00000504387 MAF1Q9H063 256 aa7.77□□□□□ -1.17
NEDD9-208ENST00000504387 CDH19Q9H159 772 aa7.77□□□□□ -1.17
NEDD9-208ENST00000504387 TRPC7Q9HCX4 862 aa7.77□□□□□ -1.17
NEDD9-208ENST00000504387 SLC38A7Q9NVC3 462 aa7.77□□□□□ -1.17
NEDD9-208ENST00000504387 RAB26Q9ULW5 256 aa7.77□□□□□ -1.17
NEDD9-208ENST00000504387 EFR3BQ9Y2G0 817 aa7.77□□□□□ -1.17
NEDD9-208ENST00000504387 SH3PXD2BA1X283 911 aa7.77□□□□□ -1.17
NEDD9-208ENST00000504387 RGSL1A5PLK6 1076 aa7.77□□□□□ -1.17
NEDD9-208ENST00000504387 TMEM221A6NGB7 291 aa7.77□□□□□ -1.17
NEDD9-208ENST00000504387 WNT10BO00744 389 aa7.77□□□□□ -1.17
NEDD9-208ENST00000504387 CCDC130P13994 396 aa7.77□□□□□ -1.17
NEDD9-208ENST00000504387 TBXAS1P24557 533 aaPredicted RBP7.77□□□□□ -1.17
NEDD9-208ENST00000504387 L1CAMP32004 1257 aa7.77□□□□□ -1.17
NEDD9-208ENST00000504387 PLIN5Q00G26 463 aa7.77□□□□□ -1.17
NEDD9-208ENST00000504387 PIGFQ07326 219 aa7.77□□□□□ -1.17
NEDD9-208ENST00000504387 IKBKEQ14164 716 aa7.77□□□□□ -1.17
NEDD9-208ENST00000504387 PPP1R3AQ16821 1122 aa7.77□□□□□ -1.17
NEDD9-208ENST00000504387 AGKQ53H12 422 aa7.77□□□□□ -1.17
NEDD9-208ENST00000504387 AARS2Q5JTZ9 985 aaKnown RBP7.77□□□□□ -1.17
NEDD9-208ENST00000504387 OTUD3Q5T2D3 398 aaPredicted RBP7.77□□□□□ -1.17
NEDD9-208ENST00000504387 LRRC38Q5VT99 294 aa7.77□□□□□ -1.17
NEDD9-208ENST00000504387 GALNT18Q6P9A2 607 aa7.77□□□□□ -1.17
NEDD9-208ENST00000504387 C14orf80Q86SX3 495 aa7.77□□□□□ -1.17
NEDD9-208ENST00000504387 SAPCD2Q86UD0 394 aa7.77□□□□□ -1.17
NEDD9-208ENST00000504387 ZC3H7AQ8IWR0 971 aaKnown RBP7.77□□□□□ -1.17
NEDD9-208ENST00000504387 BBS5Q8N3I7 341 aa7.77□□□□□ -1.17
NEDD9-208ENST00000504387 CBR4Q8N4T8 237 aa7.77□□□□□ -1.17
NEDD9-208ENST00000504387 Q8N9G6 341 aaPredicted RBP7.77□□□□□ -1.17
NEDD9-208ENST00000504387 MCUQ8NE86 351 aa7.77□□□□□ -1.17
NEDD9-208ENST00000504387 CLEC4CQ8WTT0 213 aa7.77□□□□□ -1.17
NEDD9-208ENST00000504387 CDKL2Q92772 493 aa7.77□□□□□ -1.17
NEDD9-208ENST00000504387 EXT2Q93063 718 aa7.77□□□□□ -1.17
NEDD9-208ENST00000504387 MFSD3Q96ES6 412 aa7.77□□□□□ -1.17
NEDD9-208ENST00000504387 CXorf21Q9HAI6 301 aa7.77□□□□□ -1.17
NEDD9-208ENST00000504387 ZNF302Q9NR11 478 aa7.77□□□□□ -1.17
NEDD9-208ENST00000504387 OLAHQ9NV23 265 aa7.77□□□□□ -1.17
NEDD9-208ENST00000504387 GIMAP2Q9UG22 337 aa7.77□□□□□ -1.17
NEDD9-208ENST00000504387 CIDEBQ9UHD4 219 aa7.77□□□□□ -1.17
NEDD9-208ENST00000504387 ZNF195O14628 629 aa7.76□□□□□ -1.17
NEDD9-208ENST00000504387 CHADO15335 359 aa7.76□□□□□ -1.17
NEDD9-208ENST00000504387 HCRTO43612 131 aa7.76□□□□□ -1.17
NEDD9-208ENST00000504387 DGAT1O75907 488 aa7.76□□□□□ -1.17
NEDD9-208ENST00000504387 PRKCHP24723 683 aa7.76□□□□□ -1.17
NEDD9-208ENST00000504387 ALDH4A1P30038 563 aa7.76□□□□□ -1.17
NEDD9-208ENST00000504387 GRM5P41594 1212 aa7.76□□□□□ -1.17
NEDD9-208ENST00000504387 GRIA4P48058 902 aa7.76□□□□□ -1.17
NEDD9-208ENST00000504387 PMS2P3Q13401 168 aa7.76□□□□□ -1.17
NEDD9-208ENST00000504387 PGS1Q32NB8 556 aa7.76□□□□□ -1.17
NEDD9-208ENST00000504387 CCDC92Q53HC0 331 aaPredicted RBP7.76□□□□□ -1.17
NEDD9-208ENST00000504387 SEL1L3Q68CR1 1132 aa7.76□□□□□ -1.17
NEDD9-208ENST00000504387 HEATR6Q6AI08 1181 aaKnown RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms