RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 NDST1P52848 882 aa12.96□□□□□ -0.33
LSM6-204ENST00000504181 ZNF445P59923 1031 aa12.96□□□□□ -0.33
LSM6-204ENST00000504181 BMT2Q1RMZ1 405 aa12.96□□□□□ -0.33
LSM6-204ENST00000504181 ZNF699Q32M78 642 aa12.96□□□□□ -0.33
LSM6-204ENST00000504181 ZNF667Q5HYK9 610 aa12.96□□□□□ -0.33
LSM6-204ENST00000504181 AGBL4Q5VU57 503 aa12.96□□□□□ -0.33
LSM6-204ENST00000504181 RFWD3Q6PCD5 774 aa12.96□□□□□ -0.33
LSM6-204ENST00000504181 GCNT7Q6ZNI0 430 aa12.96□□□□□ -0.33
LSM6-204ENST00000504181 MAMDC2Q7Z304 686 aaPredicted RBP12.96□□□□□ -0.33
LSM6-204ENST00000504181 PTAR1Q7Z6K3 402 aaPredicted RBP12.96□□□□□ -0.33
LSM6-204ENST00000504181 DTX1Q86Y01 620 aa12.96□□□□□ -0.33
LSM6-204ENST00000504181 MFN1Q8IWA4 741 aa12.96□□□□□ -0.33
LSM6-204ENST00000504181 SLC35F3Q8IY50 421 aa12.96□□□□□ -0.33
LSM6-204ENST00000504181 ZNF516Q92618 1163 aa12.96□□□□□ -0.33
LSM6-204ENST00000504181 FAM131CQ96AQ9 280 aa12.96□□□□□ -0.33
LSM6-204ENST00000504181 CCDC127Q96BQ5 260 aa12.96□□□□□ -0.33
LSM6-204ENST00000504181 LMLNQ96KR4 655 aa12.96□□□□□ -0.33
LSM6-204ENST00000504181 RPL10LQ96L21 214 aaKnown RBP12.96□□□□□ -0.33
LSM6-204ENST00000504181 PNPLA8Q9NP80 782 aa12.96□□□□□ -0.33
LSM6-204ENST00000504181 SLCO3A1Q9UIG8 710 aa12.96□□□□□ -0.33
LSM6-204ENST00000504181 SALL4Q9UJQ4 1053 aa12.96□□□□□ -0.33
LSM6-204ENST00000504181 LOXL2Q9Y4K0 774 aa12.96□□□□□ -0.33
LSM6-204ENST00000504181 H3BM21 787 aa12.95□□□□□ -0.34
LSM6-204ENST00000504181 SLC7A4O43246 635 aa12.95□□□□□ -0.34
LSM6-204ENST00000504181 AQP9O43315 295 aa12.95□□□□□ -0.34
LSM6-204ENST00000504181 PHACTR2O75167 634 aa12.95□□□□□ -0.34
LSM6-204ENST00000504181 VPS4BO75351 444 aa12.95□□□□□ -0.34
LSM6-204ENST00000504181 GAP43P17677 238 aa12.95□□□□□ -0.34
LSM6-204ENST00000504181 AKT2P31751 481 aa12.95□□□□□ -0.34
LSM6-204ENST00000504181 MAPK10P53779 464 aa12.95□□□□□ -0.34
LSM6-204ENST00000504181 CNTN1Q12860 1018 aa12.95□□□□□ -0.34
LSM6-204ENST00000504181 ADGRF1Q5T601 910 aa12.95□□□□□ -0.34
LSM6-204ENST00000504181 MMS22LQ6ZRQ5 1243 aa12.95□□□□□ -0.34
LSM6-204ENST00000504181 CRYBG2Q8N1P7 616 aa12.95□□□□□ -0.34
LSM6-204ENST00000504181 KDM1BQ8NB78 822 aa12.95□□□□□ -0.34
LSM6-204ENST00000504181 LMX1AQ8TE12 382 aa12.95□□□□□ -0.34
LSM6-204ENST00000504181 USP7Q93009 1102 aa12.95□□□□□ -0.34
LSM6-204ENST00000504181 NAT6Q93015 286 aa12.95□□□□□ -0.34
LSM6-204ENST00000504181 AK8Q96MA6 479 aa12.95□□□□□ -0.34
LSM6-204ENST00000504181 GFM1Q96RP9 751 aaKnown RBP12.95□□□□□ -0.34
LSM6-204ENST00000504181 IL12RB2Q99665 862 aa12.95□□□□□ -0.34
LSM6-204ENST00000504181 SARDHQ9UL12 918 aa12.95□□□□□ -0.34
LSM6-204ENST00000504181 VPS4AQ9UN37 437 aa12.95□□□□□ -0.34
LSM6-204ENST00000504181 CEP83Q9Y592 693 aa12.95□□□□□ -0.34
LSM6-204ENST00000504181 USP3Q9Y6I4 520 aa12.95□□□□□ -0.34
LSM6-204ENST00000504181 CSNK1G3Q9Y6M4 447 aa12.95□□□□□ -0.34
LSM6-204ENST00000504181 GOLGA6L7A0A1B0GV03 622 aa12.94□□□□□ -0.34
LSM6-204ENST00000504181 A0A1W2PQU0 124 aa12.94□□□□□ -0.34
LSM6-204ENST00000504181 D6RAR5 112 aa12.94□□□□□ -0.34
LSM6-204ENST00000504181 RIOK3O14730 519 aaKnown RBP12.94□□□□□ -0.34
LSM6-204ENST00000504181 CLDN1O95832 211 aa12.94□□□□□ -0.34
LSM6-204ENST00000504181 CSF2P04141 144 aa12.94□□□□□ -0.34
LSM6-204ENST00000504181 PRKCGP05129 697 aa12.94□□□□□ -0.34
LSM6-204ENST00000504181 SRPRAP08240 638 aaKnown RBP12.94□□□□□ -0.34
LSM6-204ENST00000504181 SLFN14P0C7P3 912 aa12.94□□□□□ -0.34
LSM6-204ENST00000504181 NME1P15531 152 aaKnown RBP12.94□□□□□ -0.34
LSM6-204ENST00000504181 HNRNPA2B1P22626 353 aaKnown RBP12.94□□□□□ -0.34
LSM6-204ENST00000504181 RPIAP49247 311 aa12.94□□□□□ -0.34
LSM6-204ENST00000504181 NUMBP49757 651 aa12.94□□□□□ -0.34
LSM6-204ENST00000504181 STK19P49842 368 aaPredicted RBP12.94□□□□□ -0.34
LSM6-204ENST00000504181 YWHAGP61981 247 aaKnown RBP eCLIP12.94□□□□□ -0.34
LSM6-204ENST00000504181 KLRB1Q12918 225 aa12.94□□□□□ -0.34
LSM6-204ENST00000504181 ALCAMQ13740 583 aa12.94□□□□□ -0.34
LSM6-204ENST00000504181 ELAVL3Q14576 367 aaKnown RBP12.94□□□□□ -0.34
LSM6-204ENST00000504181 SNRNP35Q16560 246 aaKnown RBP12.94□□□□□ -0.34
LSM6-204ENST00000504181 KRTAP21-3Q3LHN1 58 aa12.94□□□□□ -0.34
LSM6-204ENST00000504181 LACTB2Q53H82 288 aaPredicted RBP12.94□□□□□ -0.34
LSM6-204ENST00000504181 PITRM1Q5JRX3 1037 aa12.94□□□□□ -0.34
LSM6-204ENST00000504181 C1QL3Q5VWW1 255 aa12.94□□□□□ -0.34
LSM6-204ENST00000504181 RNF219Q5W0B1 726 aaPredicted RBP12.94□□□□□ -0.34
LSM6-204ENST00000504181 ARL6IP4Q66PJ3 421 aaKnown RBP12.94□□□□□ -0.34
LSM6-204ENST00000504181 Q6ZSR6 202 aa12.94□□□□□ -0.34
LSM6-204ENST00000504181 FAM184AQ8NB25 1140 aa12.94□□□□□ -0.34
LSM6-204ENST00000504181 GLMNQ92990 594 aa12.94□□□□□ -0.34
LSM6-204ENST00000504181 CYFIP2Q96F07 1278 aa12.94□□□□□ -0.34
LSM6-204ENST00000504181 ABHD17AQ96GS6 310 aa12.94□□□□□ -0.34
LSM6-204ENST00000504181 BOCQ9BWV1 1114 aa12.94□□□□□ -0.34
LSM6-204ENST00000504181 OLFML3Q9NRN5 406 aa12.94□□□□□ -0.34
LSM6-204ENST00000504181 SFMBT1Q9UHJ3 866 aa12.94□□□□□ -0.34
LSM6-204ENST00000504181 KLF15Q9UIH9 416 aa12.94□□□□□ -0.34
LSM6-204ENST00000504181 STOML2Q9UJZ1 356 aa12.94□□□□□ -0.34
LSM6-204ENST00000504181 FBN3Q75N90 2809 aa12.94□□□□□ -0.34
LSM6-204ENST00000504181 A0A087X0B3 334 aa12.93□□□□□ -0.34
LSM6-204ENST00000504181 A0A1W2PQ27 194 aa12.93□□□□□ -0.34
LSM6-204ENST00000504181 A0A1W2PQ64 194 aa12.93□□□□□ -0.34
LSM6-204ENST00000504181 A0A1W2PQC6 194 aa12.93□□□□□ -0.34
LSM6-204ENST00000504181 PRR19A6NJB7 356 aa12.93□□□□□ -0.34
LSM6-204ENST00000504181 A6NNZ2 444 aa12.93□□□□□ -0.34
LSM6-204ENST00000504181 C9orf172C9J069 976 aa12.93□□□□□ -0.34
LSM6-204ENST00000504181 TMX2-CTNND1H3BSU7 103 aa12.93□□□□□ -0.34
LSM6-204ENST00000504181 NR1D1P20393 614 aa12.93□□□□□ -0.34
LSM6-204ENST00000504181 TAS2R38P59533 333 aa12.93□□□□□ -0.34
LSM6-204ENST00000504181 BIRC3Q13489 604 aa12.93□□□□□ -0.34
LSM6-204ENST00000504181 FZD2Q14332 565 aa12.93□□□□□ -0.34
LSM6-204ENST00000504181 PSMD6Q15008 389 aa12.93□□□□□ -0.34
LSM6-204ENST00000504181 PIK3R6Q5UE93 754 aa12.93□□□□□ -0.34
LSM6-204ENST00000504181 ABI3BPQ7Z7G0 1075 aa12.93□□□□□ -0.34
LSM6-204ENST00000504181 CARNMT1Q8N4J0 409 aa12.93□□□□□ -0.34
LSM6-204ENST00000504181 FIBINQ8TAL6 211 aa12.93□□□□□ -0.34
LSM6-204ENST00000504181 DNAJC19Q96DA6 116 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms