RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 RNASEH2AO75792 299 aaKnown RBP3.79□□□□□ -1.8
USP46-205ENST00000504078 NEBLO76041 1014 aa3.79□□□□□ -1.8
USP46-205ENST00000504078 RTN3O95197 1032 aaPredicted RBP3.79□□□□□ -1.8
USP46-205ENST00000504078 PENKP01210 267 aaPredicted RBP3.79□□□□□ -1.8
USP46-205ENST00000504078 IGLV3-19P01714 112 aa3.79□□□□□ -1.8
USP46-205ENST00000504078 DNTTP04053 509 aa3.79□□□□□ -1.8
USP46-205ENST00000504078 RARGP13631 454 aa3.79□□□□□ -1.8
USP46-205ENST00000504078 VAV1P15498 845 aa3.79□□□□□ -1.8
USP46-205ENST00000504078 PRLRP16471 622 aa3.79□□□□□ -1.8
USP46-205ENST00000504078 PFKLP17858 780 aa3.79□□□□□ -1.8
USP46-205ENST00000504078 ACO1P21399 889 aaKnown RBP3.79□□□□□ -1.8
USP46-205ENST00000504078 EPHA1P21709 976 aa3.79□□□□□ -1.8
USP46-205ENST00000504078 PAX3P23760 479 aa3.79□□□□□ -1.8
USP46-205ENST00000504078 CD27P26842 260 aa3.79□□□□□ -1.8
USP46-205ENST00000504078 OXTRP30559 389 aa3.79□□□□□ -1.8
USP46-205ENST00000504078 GNL1P36915 607 aaPredicted RBP3.79□□□□□ -1.8
USP46-205ENST00000504078 PRPHP41219 470 aa3.79□□□□□ -1.8
USP46-205ENST00000504078 ARL4DP49703 201 aa3.79□□□□□ -1.8
USP46-205ENST00000504078 NXPH1P58417 271 aa3.79□□□□□ -1.8
USP46-205ENST00000504078 CYP4F2P78329 520 aa3.79□□□□□ -1.8
USP46-205ENST00000504078 TLE1Q04724 770 aa3.79□□□□□ -1.8
USP46-205ENST00000504078 GOLGA8FQ08AF8 430 aa3.79□□□□□ -1.8
USP46-205ENST00000504078 GOLGA8DPQ0D2H9 430 aa3.79□□□□□ -1.8
USP46-205ENST00000504078 BIRC3Q13489 604 aa3.79□□□□□ -1.8
USP46-205ENST00000504078 KCNJ12Q14500 433 aa3.79□□□□□ -1.8
USP46-205ENST00000504078 ANKRD1Q15327 319 aa3.79□□□□□ -1.8
USP46-205ENST00000504078 MAPRE1Q15691 268 aaKnown RBP3.79□□□□□ -1.8
USP46-205ENST00000504078 SKIDA1Q1XH10 827 aa3.79□□□□□ -1.8
USP46-205ENST00000504078 ZNF699Q32M78 642 aa3.79□□□□□ -1.8
USP46-205ENST00000504078 WDR72Q3MJ13 1102 aa3.79□□□□□ -1.8
USP46-205ENST00000504078 TTC31Q49AM3 519 aaPredicted RBP3.79□□□□□ -1.8
USP46-205ENST00000504078 CRTC2Q53ET0 693 aaPredicted RBP3.79□□□□□ -1.8
USP46-205ENST00000504078 ZNF542PQ5EBM4 170 aa3.79□□□□□ -1.8
USP46-205ENST00000504078 L1TD1Q5T7N2 865 aaKnown RBP3.79□□□□□ -1.8
USP46-205ENST00000504078 ZNF776Q68DI1 518 aaPredicted RBP3.79□□□□□ -1.8
USP46-205ENST00000504078 SLFN12LQ6IEE8 588 aa3.79□□□□□ -1.8
USP46-205ENST00000504078 SPOPLQ6IQ16 392 aa3.79□□□□□ -1.8
USP46-205ENST00000504078 PAOXQ6QHF9 649 aa3.79□□□□□ -1.8
USP46-205ENST00000504078 DBX2Q6ZNG2 339 aa3.79□□□□□ -1.8
USP46-205ENST00000504078 PAQR9Q6ZVX9 377 aa3.79□□□□□ -1.8
USP46-205ENST00000504078 CHST9Q7L1S5 443 aa3.79□□□□□ -1.8
USP46-205ENST00000504078 TRAPPC11Q7Z392 1133 aa3.79□□□□□ -1.8
USP46-205ENST00000504078 SPATS2Q86XZ4 545 aaKnown RBP3.79□□□□□ -1.8
USP46-205ENST00000504078 DENND1CQ8IV53 801 aa3.79□□□□□ -1.8
USP46-205ENST00000504078 MMAAQ8IVH4 418 aaKnown RBP3.79□□□□□ -1.8
USP46-205ENST00000504078 NELFCDQ8IXH7 590 aa3.79□□□□□ -1.8
USP46-205ENST00000504078 FUKQ8N0W3 1084 aa3.79□□□□□ -1.8
USP46-205ENST00000504078 GPD1LQ8N335 351 aa3.79□□□□□ -1.8
USP46-205ENST00000504078 C12orf29Q8N999 325 aa3.79□□□□□ -1.8
USP46-205ENST00000504078 FBXO18Q8NFZ0 1043 aa3.79□□□□□ -1.8
USP46-205ENST00000504078 DDI1Q8WTU0 396 aa3.79□□□□□ -1.8
USP46-205ENST00000504078 CACTINQ8WUQ7 758 aaKnown RBP3.79□□□□□ -1.8
USP46-205ENST00000504078 UCMAQ8WVF2 138 aa3.79□□□□□ -1.8
USP46-205ENST00000504078 NDRG1Q92597 394 aaKnown RBP3.79□□□□□ -1.8
USP46-205ENST00000504078 KLK6Q92876 244 aa3.79□□□□□ -1.8
USP46-205ENST00000504078 OTUB2Q96DC9 234 aa3.79□□□□□ -1.8
USP46-205ENST00000504078 CALML4Q96GE6 196 aa3.79□□□□□ -1.8
USP46-205ENST00000504078 SMARCD1Q96GM5 515 aa3.79□□□□□ -1.8
USP46-205ENST00000504078 ATXN7L3BQ96GX2 97 aa3.79□□□□□ -1.8
USP46-205ENST00000504078 HIC2Q96JB3 615 aa3.79□□□□□ -1.8
USP46-205ENST00000504078 SERAC1Q96JX3 654 aa3.79□□□□□ -1.8
USP46-205ENST00000504078 ACCSQ96QU6 501 aa3.79□□□□□ -1.8
USP46-205ENST00000504078 TWNKQ96RR1 684 aa3.79□□□□□ -1.8
USP46-205ENST00000504078 CGRRF1Q99675 332 aa3.79□□□□□ -1.8
USP46-205ENST00000504078 OSGEPQ9NPF4 335 aa3.79□□□□□ -1.8
USP46-205ENST00000504078 ASCL3Q9NQ33 180 aa3.79□□□□□ -1.8
USP46-205ENST00000504078 PRSS16Q9NQE7 514 aa3.79□□□□□ -1.8
USP46-205ENST00000504078 GDF3Q9NR23 364 aa3.79□□□□□ -1.8
USP46-205ENST00000504078 ELOVL2Q9NXB9 296 aa3.79□□□□□ -1.8
USP46-205ENST00000504078 WDR35Q9P2L0 1181 aa3.79□□□□□ -1.8
USP46-205ENST00000504078 TFIP11Q9UBB9 837 aaKnown RBP3.79□□□□□ -1.8
USP46-205ENST00000504078 IL17BQ9UHF5 180 aa3.79□□□□□ -1.8
USP46-205ENST00000504078 PCDHGA1Q9Y5H4 931 aa3.79□□□□□ -1.8
USP46-205ENST00000504078 STYXL1Q9Y6J8 313 aa3.79□□□□□ -1.8
USP46-205ENST00000504078 COL12A1Q99715 3063 aa3.79□□□□□ -1.8
USP46-205ENST00000504078 MYH10P35580 1976 aa3.79□□□□□ -1.8
USP46-205ENST00000504078 ASXL3Q9C0F0 2248 aa3.79□□□□□ -1.8
USP46-205ENST00000504078 CFAP46Q8IYW2 2715 aa3.79□□□□□ -1.8
USP46-205ENST00000504078 ZFC3H1O60293 1989 aaKnown RBP3.78□□□□□ -1.8
USP46-205ENST00000504078 UBE4BO95155 1302 aa3.78□□□□□ -1.8
USP46-205ENST00000504078 BSNQ9UPA5 3926 aa3.78□□□□□ -1.8
USP46-205ENST00000504078 A0A1W2PPC4 97 aa3.78□□□□□ -1.8
USP46-205ENST00000504078 A0A1W2PR77 199 aa3.78□□□□□ -1.8
USP46-205ENST00000504078 VILLO15195 856 aa3.78□□□□□ -1.8
USP46-205ENST00000504078 DDX3YO15523 660 aaKnown RBP3.78□□□□□ -1.8
USP46-205ENST00000504078 ADAM11O75078 769 aa3.78□□□□□ -1.8
USP46-205ENST00000504078 PHACTR2O75167 634 aa3.78□□□□□ -1.8
USP46-205ENST00000504078 KRT38O76015 456 aa3.78□□□□□ -1.8
USP46-205ENST00000504078 CST3P01034 146 aaPredicted RBP3.78□□□□□ -1.8
USP46-205ENST00000504078 ZDHHC11BP0C7U3 371 aa3.78□□□□□ -1.8
USP46-205ENST00000504078 FAM200BP0CF97 657 aa3.78□□□□□ -1.8
USP46-205ENST00000504078 PABPC1P11940 636 aaKnown RBP3.78□□□□□ -1.8
USP46-205ENST00000504078 HGFP14210 728 aa3.78□□□□□ -1.8
USP46-205ENST00000504078 CKMT2P17540 419 aa3.78□□□□□ -1.8
USP46-205ENST00000504078 TNNI1P19237 187 aa3.78□□□□□ -1.8
USP46-205ENST00000504078 CD58P19256 250 aa3.78□□□□□ -1.8
USP46-205ENST00000504078 BRD2P25440 801 aaKnown RBP3.78□□□□□ -1.8
USP46-205ENST00000504078 HOXD9P28356 352 aaPredicted RBP3.78□□□□□ -1.8
USP46-205ENST00000504078 CD38P28907 300 aa3.78□□□□□ -1.8
USP46-205ENST00000504078 HLA-FP30511 346 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms