RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 SH2D3AQ9BRG2 576 aa5.45□□□□□ -1.54
FXN-205ENST00000498653 TIPINQ9BVW5 301 aa5.45□□□□□ -1.54
FXN-205ENST00000498653 TRIM6Q9C030 488 aaPredicted RBP5.45□□□□□ -1.54
FXN-205ENST00000498653 NUP62CLQ9H1M0 184 aa5.45□□□□□ -1.54
FXN-205ENST00000498653 BHMT2Q9H2M3 363 aa5.45□□□□□ -1.54
FXN-205ENST00000498653 TNMDQ9H2S6 317 aa5.45□□□□□ -1.54
FXN-205ENST00000498653 CLSTN2Q9H4D0 955 aa5.45□□□□□ -1.54
FXN-205ENST00000498653 TMEM206Q9H813 350 aa5.45□□□□□ -1.54
FXN-205ENST00000498653 CYP4F12Q9HCS2 524 aa5.45□□□□□ -1.54
FXN-205ENST00000498653 SEMA3GQ9NS98 782 aa5.45□□□□□ -1.54
FXN-205ENST00000498653 KBTBD4Q9NVX7 518 aa5.45□□□□□ -1.54
FXN-205ENST00000498653 KCND2Q9NZV8 630 aa5.45□□□□□ -1.54
FXN-205ENST00000498653 USP20Q9Y2K6 914 aa5.45□□□□□ -1.54
FXN-205ENST00000498653 COL4A3BPQ9Y5P4 624 aa5.45□□□□□ -1.54
FXN-205ENST00000498653 KCNMB2Q9Y691 235 aa5.45□□□□□ -1.54
FXN-205ENST00000498653 RYR2Q92736 4967 aa5.45□□□□□ -1.54
FXN-205ENST00000498653 HERC2O95714 4834 aa5.45□□□□□ -1.54
FXN-205ENST00000498653 ELOA3CA0A087WX78 387 aaPredicted RBP5.44□□□□□ -1.54
FXN-205ENST00000498653 A0A1W2PPC4 97 aa5.44□□□□□ -1.54
FXN-205ENST00000498653 TARSL2A2RTX5 802 aaKnown RBP5.44□□□□□ -1.54
FXN-205ENST00000498653 ELOA3DA6NLF2 546 aaPredicted RBP5.44□□□□□ -1.54
FXN-205ENST00000498653 C10orf142B7Z368 130 aa5.44□□□□□ -1.54
FXN-205ENST00000498653 PRRT4C9JH25 899 aa5.44□□□□□ -1.54
FXN-205ENST00000498653 C19orf84I3L1E1 186 aa5.44□□□□□ -1.54
FXN-205ENST00000498653 FFAR2O15552 330 aa5.44□□□□□ -1.54
FXN-205ENST00000498653 OIP5O43482 229 aa5.44□□□□□ -1.54
FXN-205ENST00000498653 USO1O60763 962 aaKnown RBP5.44□□□□□ -1.54
FXN-205ENST00000498653 TBCAO75347 108 aaKnown RBP5.44□□□□□ -1.54
FXN-205ENST00000498653 TULP3O75386 442 aa5.44□□□□□ -1.54
FXN-205ENST00000498653 SASH3O75995 380 aa5.44□□□□□ -1.54
FXN-205ENST00000498653 ERLIN2O94905 339 aa5.44□□□□□ -1.54
FXN-205ENST00000498653 LETM1O95202 739 aaPredicted RBP5.44□□□□□ -1.54
FXN-205ENST00000498653 SMC2O95347 1197 aa5.44□□□□□ -1.54
FXN-205ENST00000498653 SEMA4FO95754 770 aa5.44□□□□□ -1.54
FXN-205ENST00000498653 MYL1P05976 194 aa5.44□□□□□ -1.54
FXN-205ENST00000498653 CELA2BP08218 269 aaPredicted RBP5.44□□□□□ -1.54
FXN-205ENST00000498653 ARF4P18085 180 aaPredicted RBP5.44□□□□□ -1.54
FXN-205ENST00000498653 CYP11B2P19099 503 aa5.44□□□□□ -1.54
FXN-205ENST00000498653 AMPD1P23109 780 aa5.44□□□□□ -1.54
FXN-205ENST00000498653 GUCY2CP25092 1073 aa5.44□□□□□ -1.54
FXN-205ENST00000498653 DNM2P50570 870 aa5.44□□□□□ -1.54
FXN-205ENST00000498653 BCAT1P54687 386 aa5.44□□□□□ -1.54
FXN-205ENST00000498653 SLC12A3P55017 1021 aa5.44□□□□□ -1.54
FXN-205ENST00000498653 SOX4Q06945 474 aaPredicted RBP5.44□□□□□ -1.54
FXN-205ENST00000498653 GPR17Q13304 367 aa5.44□□□□□ -1.54
FXN-205ENST00000498653 PNOCQ13519 176 aa5.44□□□□□ -1.54
FXN-205ENST00000498653 POSTNQ15063 836 aa5.44□□□□□ -1.54
FXN-205ENST00000498653 CAMK4Q16566 473 aa5.44□□□□□ -1.54
FXN-205ENST00000498653 ELOA3BQ3SY89 546 aa5.44□□□□□ -1.54
FXN-205ENST00000498653 GLRA4Q5JXX5 417 aa5.44□□□□□ -1.54
FXN-205ENST00000498653 RINT1Q6NUQ1 792 aa5.44□□□□□ -1.54
FXN-205ENST00000498653 BHLHB9Q6PI77 547 aa5.44□□□□□ -1.54
FXN-205ENST00000498653 C1orf186Q6ZWK4 172 aa5.44□□□□□ -1.54
FXN-205ENST00000498653 DYMQ7RTS9 669 aa5.44□□□□□ -1.54
FXN-205ENST00000498653 TMPRSS6Q8IU80 811 aa5.44□□□□□ -1.54
FXN-205ENST00000498653 CCDC65Q8IXS2 484 aa5.44□□□□□ -1.54
FXN-205ENST00000498653 GALNT6Q8NCL4 622 aa5.44□□□□□ -1.54
FXN-205ENST00000498653 STKLD1Q8NE28 680 aa5.44□□□□□ -1.54
FXN-205ENST00000498653 MCPH1Q8NEM0 835 aa5.44□□□□□ -1.54
FXN-205ENST00000498653 ELOA3Q8NG57 546 aa5.44□□□□□ -1.54
FXN-205ENST00000498653 LRRC15Q8TF66 581 aa5.44□□□□□ -1.54
FXN-205ENST00000498653 TCP11Q8WWU5 503 aa5.44□□□□□ -1.54
FXN-205ENST00000498653 EDARADDQ8WWZ3 215 aa5.44□□□□□ -1.54
FXN-205ENST00000498653 SMARCE1Q969G3 411 aa5.44□□□□□ -1.54
FXN-205ENST00000498653 FUBP3Q96I24 572 aaKnown RBP eCLIP5.44□□□□□ -1.54
FXN-205ENST00000498653 SLC45A3Q96JT2 553 aa5.44□□□□□ -1.54
FXN-205ENST00000498653 C7orf25Q9BPX7 421 aa5.44□□□□□ -1.54
FXN-205ENST00000498653 RUSC1Q9BVN2 902 aa5.44□□□□□ -1.54
FXN-205ENST00000498653 SPRTNQ9H040 489 aaPredicted RBP5.44□□□□□ -1.54
FXN-205ENST00000498653 EPB41L5Q9HCM4 733 aa5.44□□□□□ -1.54
FXN-205ENST00000498653 GCNT4Q9P109 453 aa5.44□□□□□ -1.54
FXN-205ENST00000498653 TCHHQ07283 1943 aa5.43□□□□□ -1.54
FXN-205ENST00000498653 NPHP3-ACAD11A0A0J9YXS1 232 aa5.43□□□□□ -1.54
FXN-205ENST00000498653 PVALEFA0A1B0GWK0 134 aa5.43□□□□□ -1.54
FXN-205ENST00000498653 ADARB2-AS1A8MUL3 147 aa5.43□□□□□ -1.54
FXN-205ENST00000498653 GFRA2O00451 464 aa5.43□□□□□ -1.54
FXN-205ENST00000498653 PIK3R2O00459 728 aa5.43□□□□□ -1.54
FXN-205ENST00000498653 SCAMP3O14828 347 aaKnown RBP5.43□□□□□ -1.54
FXN-205ENST00000498653 B4GALT5O43286 388 aa5.43□□□□□ -1.54
FXN-205ENST00000498653 FZD6O60353 706 aa5.43□□□□□ -1.54
FXN-205ENST00000498653 HIP1RO75146 1068 aa5.43□□□□□ -1.54
FXN-205ENST00000498653 CKMP06732 381 aa5.43□□□□□ -1.54
FXN-205ENST00000498653 EPXP11678 715 aa5.43□□□□□ -1.54
FXN-205ENST00000498653 IDEP14735 1019 aa5.43□□□□□ -1.54
FXN-205ENST00000498653 GAP43P17677 238 aa5.43□□□□□ -1.54
FXN-205ENST00000498653 DGKAP23743 735 aa5.43□□□□□ -1.54
FXN-205ENST00000498653 CD82P27701 267 aa5.43□□□□□ -1.54
FXN-205ENST00000498653 CD38P28907 300 aa5.43□□□□□ -1.54
FXN-205ENST00000498653 CASP1P29466 404 aa5.43□□□□□ -1.54
FXN-205ENST00000498653 PLAURQ03405 335 aa5.43□□□□□ -1.54
FXN-205ENST00000498653 CUL4BQ13620 913 aa5.43□□□□□ -1.54
FXN-205ENST00000498653 FGL2Q14314 439 aa5.43□□□□□ -1.54
FXN-205ENST00000498653 DRAP1Q14919 205 aaPredicted RBP5.43□□□□□ -1.54
FXN-205ENST00000498653 EMC2Q15006 297 aa5.43□□□□□ -1.54
FXN-205ENST00000498653 TRIP4Q15650 581 aaPredicted RBP5.43□□□□□ -1.54
FXN-205ENST00000498653 ARSHQ5FYA8 562 aa5.43□□□□□ -1.54
FXN-205ENST00000498653 VWA2Q5GFL6 755 aa5.43□□□□□ -1.54
FXN-205ENST00000498653 PERM1Q5SV97 790 aa5.43□□□□□ -1.54
FXN-205ENST00000498653 ZNF385CQ66K41 422 aaPredicted RBP5.43□□□□□ -1.54
FXN-205ENST00000498653 SDE2Q6IQ49 451 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms