RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 NEK11Q8NG66 645 aa8.72□□□□□ -1.01
HMGXB4-207ENST00000498212 OR52K2Q8NGK3 314 aa8.72□□□□□ -1.01
HMGXB4-207ENST00000498212 BIRC7Q96CA5 298 aa8.72□□□□□ -1.01
HMGXB4-207ENST00000498212 CFAP57Q96MR6 1250 aa8.72□□□□□ -1.01
HMGXB4-207ENST00000498212 FAM129BQ96TA1 746 aa8.72□□□□□ -1.01
HMGXB4-207ENST00000498212 OMDQ99983 421 aa8.72□□□□□ -1.01
HMGXB4-207ENST00000498212 ANLNQ9NQW6 1124 aa8.72□□□□□ -1.01
HMGXB4-207ENST00000498212 METTL5Q9NRN9 209 aaKnown RBP8.72□□□□□ -1.01
HMGXB4-207ENST00000498212 FBXL12Q9NXK8 326 aa8.72□□□□□ -1.01
HMGXB4-207ENST00000498212 TMEM59LQ9UK28 342 aa8.72□□□□□ -1.01
HMGXB4-207ENST00000498212 VPS28Q9UK41 221 aa8.72□□□□□ -1.01
HMGXB4-207ENST00000498212 FAM47DPA6NHR8 397 aa8.71□□□□□ -1.02
HMGXB4-207ENST00000498212 LRRC10BA6NIK2 292 aa8.71□□□□□ -1.02
HMGXB4-207ENST00000498212 E9PAM4 449 aa8.71□□□□□ -1.02
HMGXB4-207ENST00000498212 I6L893 689 aaPredicted RBP8.71□□□□□ -1.02
HMGXB4-207ENST00000498212 GJB3O75712 270 aa8.71□□□□□ -1.02
HMGXB4-207ENST00000498212 RNASEH2AO75792 299 aaKnown RBP8.71□□□□□ -1.02
HMGXB4-207ENST00000498212 CNTN5O94779 1100 aa8.71□□□□□ -1.02
HMGXB4-207ENST00000498212 CER1O95813 267 aa8.71□□□□□ -1.02
HMGXB4-207ENST00000498212 ADH1BP00325 375 aa8.71□□□□□ -1.02
HMGXB4-207ENST00000498212 RHOCP08134 193 aa8.71□□□□□ -1.02
HMGXB4-207ENST00000498212 CD59P13987 128 aa8.71□□□□□ -1.02
HMGXB4-207ENST00000498212 VAV1P15498 845 aa8.71□□□□□ -1.02
HMGXB4-207ENST00000498212 CHRNB2P17787 502 aa8.71□□□□□ -1.02
HMGXB4-207ENST00000498212 C5AR1P21730 350 aa8.71□□□□□ -1.02
HMGXB4-207ENST00000498212 MMP8P22894 467 aa8.71□□□□□ -1.02
HMGXB4-207ENST00000498212 SLC8A1P32418 973 aa8.71□□□□□ -1.02
HMGXB4-207ENST00000498212 RDXP35241 583 aaKnown RBP8.71□□□□□ -1.02
HMGXB4-207ENST00000498212 PSMD8P48556 350 aa8.71□□□□□ -1.02
HMGXB4-207ENST00000498212 CSNK1EP49674 416 aaKnown RBP8.71□□□□□ -1.02
HMGXB4-207ENST00000498212 AFF3P51826 1226 aaKnown RBP8.71□□□□□ -1.02
HMGXB4-207ENST00000498212 KRT83P78385 493 aa8.71□□□□□ -1.02
HMGXB4-207ENST00000498212 UBXN1Q04323 297 aa8.71□□□□□ -1.02
HMGXB4-207ENST00000498212 TYRO3Q06418 890 aa8.71□□□□□ -1.02
HMGXB4-207ENST00000498212 FOXC1Q12948 553 aa8.71□□□□□ -1.02
HMGXB4-207ENST00000498212 TEAD4Q15561 434 aa8.71□□□□□ -1.02
HMGXB4-207ENST00000498212 ACCSLQ4AC99 568 aa8.71□□□□□ -1.02
HMGXB4-207ENST00000498212 ALFQ53S48 1182 aa8.71□□□□□ -1.02
HMGXB4-207ENST00000498212 KIAA0895LQ68EN5 471 aa8.71□□□□□ -1.02
HMGXB4-207ENST00000498212 IL27RAQ6UWB1 636 aa8.71□□□□□ -1.02
HMGXB4-207ENST00000498212 LRRC31Q6UY01 552 aa8.71□□□□□ -1.02
HMGXB4-207ENST00000498212 TRIM72Q6ZMU5 477 aa8.71□□□□□ -1.02
HMGXB4-207ENST00000498212 BNIPLQ7Z465 357 aa8.71□□□□□ -1.02
HMGXB4-207ENST00000498212 SETD3Q86TU7 594 aaPredicted RBP8.71□□□□□ -1.02
HMGXB4-207ENST00000498212 ZNF683Q8IZ20 524 aa8.71□□□□□ -1.02
HMGXB4-207ENST00000498212 AOPEPQ8N6M6 819 aa8.71□□□□□ -1.02
HMGXB4-207ENST00000498212 EMC1Q8N766 993 aa8.71□□□□□ -1.02
HMGXB4-207ENST00000498212 C1orf216Q8TAB5 229 aa8.71□□□□□ -1.02
HMGXB4-207ENST00000498212 SLC30A5Q8TAD4 765 aa8.71□□□□□ -1.02
HMGXB4-207ENST00000498212 FRS2Q8WU20 508 aa8.71□□□□□ -1.02
HMGXB4-207ENST00000498212 ALG14Q96F25 216 aa8.71□□□□□ -1.02
HMGXB4-207ENST00000498212 C1orf74Q96LT6 269 aa8.71□□□□□ -1.02
HMGXB4-207ENST00000498212 ERGIC2Q96RQ1 377 aa8.71□□□□□ -1.02
HMGXB4-207ENST00000498212 C11orf70Q9BRQ4 267 aa8.71□□□□□ -1.02
HMGXB4-207ENST00000498212 FEM1AQ9BSK4 669 aa8.71□□□□□ -1.02
HMGXB4-207ENST00000498212 MUC3BQ9H195 1237 aa8.71□□□□□ -1.02
HMGXB4-207ENST00000498212 NEUROG2Q9H2A3 272 aa8.71□□□□□ -1.02
HMGXB4-207ENST00000498212 GAREM1Q9H706 876 aa8.71□□□□□ -1.02
HMGXB4-207ENST00000498212 OSGEPQ9NPF4 335 aa8.71□□□□□ -1.02
HMGXB4-207ENST00000498212 TMPRSS4Q9NRS4 437 aa8.71□□□□□ -1.02
HMGXB4-207ENST00000498212 TMEM63CQ9P1W3 806 aa8.71□□□□□ -1.02
HMGXB4-207ENST00000498212 SERGEFQ9UGK8 458 aa8.71□□□□□ -1.02
HMGXB4-207ENST00000498212 ADAMTS1Q9UHI8 967 aa8.71□□□□□ -1.02
HMGXB4-207ENST00000498212 FZD4Q9ULV1 537 aa8.71□□□□□ -1.02
HMGXB4-207ENST00000498212 TBC1D30Q9Y2I9 924 aa8.71□□□□□ -1.02
HMGXB4-207ENST00000498212 OR51B4Q9Y5P0 310 aa8.71□□□□□ -1.02
HMGXB4-207ENST00000498212 SNX10Q9Y5X0 201 aa8.71□□□□□ -1.02
HMGXB4-207ENST00000498212 PTPRBP23467 1997 aa8.71□□□□□ -1.02
HMGXB4-207ENST00000498212 IGLV3-10A0A075B6K4 115 aa8.7□□□□□ -1.02
HMGXB4-207ENST00000498212 SPAARA0A1B0GVQ0 90 aa8.7□□□□□ -1.02
HMGXB4-207ENST00000498212 A0A1B0GVT2 93 aa8.7□□□□□ -1.02
HMGXB4-207ENST00000498212 LRRC72A6NJI9 287 aa8.7□□□□□ -1.02
HMGXB4-207ENST00000498212 DRGXA6NNA5 263 aa8.7□□□□□ -1.02
HMGXB4-207ENST00000498212 ATP9BO43861 1147 aa8.7□□□□□ -1.02
HMGXB4-207ENST00000498212 SH3BP5O60239 455 aa8.7□□□□□ -1.02
HMGXB4-207ENST00000498212 SRGAP2O75044 1071 aa8.7□□□□□ -1.02
HMGXB4-207ENST00000498212 IL1BP01584 269 aa8.7□□□□□ -1.02
HMGXB4-207ENST00000498212 IGHV4-34P06331 123 aa8.7□□□□□ -1.02
HMGXB4-207ENST00000498212 UNGP13051 313 aaPredicted RBP8.7□□□□□ -1.02
HMGXB4-207ENST00000498212 GOT1P17174 413 aa8.7□□□□□ -1.02
HMGXB4-207ENST00000498212 CD27P26842 260 aa8.7□□□□□ -1.02
HMGXB4-207ENST00000498212 OR1E1P30953 314 aa8.7□□□□□ -1.02
HMGXB4-207ENST00000498212 NSFP46459 744 aaKnown RBP8.7□□□□□ -1.02
HMGXB4-207ENST00000498212 GRIA4P48058 902 aa8.7□□□□□ -1.02
HMGXB4-207ENST00000498212 GALCP54803 685 aa8.7□□□□□ -1.02
HMGXB4-207ENST00000498212 ATP11AP98196 1134 aa8.7□□□□□ -1.02
HMGXB4-207ENST00000498212 BNC1Q01954 994 aa8.7□□□□□ -1.02
HMGXB4-207ENST00000498212 HNRNPDQ14103 355 aaKnown RBP8.7□□□□□ -1.02
HMGXB4-207ENST00000498212 NCAPHQ15003 741 aa8.7□□□□□ -1.02
HMGXB4-207ENST00000498212 DLG2Q15700 870 aa8.7□□□□□ -1.02
HMGXB4-207ENST00000498212 CDO1Q16878 200 aa8.7□□□□□ -1.02
HMGXB4-207ENST00000498212 NCEH1Q6PIU2 408 aa8.7□□□□□ -1.02
HMGXB4-207ENST00000498212 ADAT2Q7Z6V5 191 aaKnown RBP8.7□□□□□ -1.02
HMGXB4-207ENST00000498212 DSG4Q86SJ6 1040 aa8.7□□□□□ -1.02
HMGXB4-207ENST00000498212 FAM131BQ86XD5 332 aa8.7□□□□□ -1.02
HMGXB4-207ENST00000498212 NAXDQ8IW45 347 aa8.7□□□□□ -1.02
HMGXB4-207ENST00000498212 SH2D3CQ8N5H7 860 aa8.7□□□□□ -1.02
HMGXB4-207ENST00000498212 AADATQ8N5Z0 425 aa8.7□□□□□ -1.02
HMGXB4-207ENST00000498212 OR2T34Q8NGX1 318 aa8.7□□□□□ -1.02
HMGXB4-207ENST00000498212 OR8D1Q8WZ84 308 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms