RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 PLEKHG6Q3KR16 790 aa13.9□□□□□ -0.18
CPNE1-227ENST00000498056 PARP15Q460N3 678 aa13.9□□□□□ -0.18
CPNE1-227ENST00000498056 PREPLQ4J6C6 727 aaPredicted RBP13.9□□□□□ -0.18
CPNE1-227ENST00000498056 SLC44A4Q53GD3 710 aa13.9□□□□□ -0.18
CPNE1-227ENST00000498056 PAPD7Q5XG87 772 aaKnown RBP13.9□□□□□ -0.18
CPNE1-227ENST00000498056 SLC13A5Q86YT5 568 aaPredicted RBP13.9□□□□□ -0.18
CPNE1-227ENST00000498056 ARHGAP12Q8IWW6 846 aa13.9□□□□□ -0.18
CPNE1-227ENST00000498056 TP53INP2Q8IXH6 220 aa13.9□□□□□ -0.18
CPNE1-227ENST00000498056 APCDD1Q8J025 514 aa13.9□□□□□ -0.18
CPNE1-227ENST00000498056 UMODL1-AS1Q8N2C9 162 aa13.9□□□□□ -0.18
CPNE1-227ENST00000498056 PHTF2Q8N3S3 785 aa13.9□□□□□ -0.18
CPNE1-227ENST00000498056 LZTR1Q8N653 840 aa13.9□□□□□ -0.18
CPNE1-227ENST00000498056 DCAF4L2Q8NA75 395 aa13.9□□□□□ -0.18
CPNE1-227ENST00000498056 WFIKKN2Q8TEU8 576 aa13.9□□□□□ -0.18
CPNE1-227ENST00000498056 P3H4Q92791 437 aa13.9□□□□□ -0.18
CPNE1-227ENST00000498056 MS4A14Q96JA4 679 aa13.9□□□□□ -0.18
CPNE1-227ENST00000498056 FAM118BQ9BPY3 351 aa13.9□□□□□ -0.18
CPNE1-227ENST00000498056 SLC39A8Q9C0K1 460 aa13.9□□□□□ -0.18
CPNE1-227ENST00000498056 RETREG1Q9H6L5 497 aa13.9□□□□□ -0.18
CPNE1-227ENST00000498056 NOL6Q9H6R4 1146 aaKnown RBP13.9□□□□□ -0.18
CPNE1-227ENST00000498056 SP110Q9HB58 689 aa13.9□□□□□ -0.18
CPNE1-227ENST00000498056 DTLQ9NZJ0 730 aa13.9□□□□□ -0.18
CPNE1-227ENST00000498056 NDRG2Q9UN36 371 aaKnown RBP13.9□□□□□ -0.18
CPNE1-227ENST00000498056 TCRBV7S2A1N4TA0A589 114 aa13.89□□□□□ -0.19
CPNE1-227ENST00000498056 APOC4-APOC2K7ER74 178 aa13.89□□□□□ -0.19
CPNE1-227ENST00000498056 CBX4O00257 560 aa13.89□□□□□ -0.19
CPNE1-227ENST00000498056 APOC2P02655 101 aa13.89□□□□□ -0.19
CPNE1-227ENST00000498056 NDST2P52849 883 aa13.89□□□□□ -0.19
CPNE1-227ENST00000498056 SEC13P55735 322 aa13.89□□□□□ -0.19
CPNE1-227ENST00000498056 OTUD4Q01804 1114 aaKnown RBP13.89□□□□□ -0.19
CPNE1-227ENST00000498056 SLC12A1Q13621 1099 aa13.89□□□□□ -0.19
CPNE1-227ENST00000498056 ZNF783Q6ZMS7 281 aa13.89□□□□□ -0.19
CPNE1-227ENST00000498056 SFTPA1Q8IWL2 248 aa13.89□□□□□ -0.19
CPNE1-227ENST00000498056 SIX5Q8N196 739 aa13.89□□□□□ -0.19
CPNE1-227ENST00000498056 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.89□□□□□ -0.19
CPNE1-227ENST00000498056 FAM3CQ92520 227 aa13.89□□□□□ -0.19
CPNE1-227ENST00000498056 ARHGEF2Q92974 986 aaKnown RBP13.89□□□□□ -0.19
CPNE1-227ENST00000498056 C2orf49Q9BVC5 232 aaPredicted RBP13.89□□□□□ -0.19
CPNE1-227ENST00000498056 KLC2Q9H0B6 622 aa13.89□□□□□ -0.19
CPNE1-227ENST00000498056 MAGEH1Q9H213 219 aa13.89□□□□□ -0.19
CPNE1-227ENST00000498056 LRRC19Q9H756 370 aa13.89□□□□□ -0.19
CPNE1-227ENST00000498056 PRDM16Q9HAZ2 1276 aa13.89□□□□□ -0.19
CPNE1-227ENST00000498056 SAE1Q9UBE0 346 aaPredicted RBP13.89□□□□□ -0.19
CPNE1-227ENST00000498056 INTS6Q9UL03 887 aaKnown RBP13.89□□□□□ -0.19
CPNE1-227ENST00000498056 HPCAL4Q9UM19 191 aa13.89□□□□□ -0.19
CPNE1-227ENST00000498056 EFR3BQ9Y2G0 817 aa13.89□□□□□ -0.19
CPNE1-227ENST00000498056 SLC27A6Q9Y2P4 619 aa13.89□□□□□ -0.19
CPNE1-227ENST00000498056 TBC1D3BA6NDS4 549 aa13.88□□□□□ -0.19
CPNE1-227ENST00000498056 CES2O00748 559 aa13.88□□□□□ -0.19
CPNE1-227ENST00000498056 PPP1R12AO14974 1030 aaPredicted RBP13.88□□□□□ -0.19
CPNE1-227ENST00000498056 MCF2LO15068 1137 aa13.88□□□□□ -0.19
CPNE1-227ENST00000498056 SNAP91O60641 907 aa13.88□□□□□ -0.19
CPNE1-227ENST00000498056 URI1O94763 535 aaPredicted RBP13.88□□□□□ -0.19
CPNE1-227ENST00000498056 TUBB4AP04350 444 aa13.88□□□□□ -0.19
CPNE1-227ENST00000498056 CISD3P0C7P0 127 aa13.88□□□□□ -0.19
CPNE1-227ENST00000498056 GLULP15104 373 aa13.88□□□□□ -0.19
CPNE1-227ENST00000498056 POLR2EP19388 210 aaKnown RBP13.88□□□□□ -0.19
CPNE1-227ENST00000498056 CD72P21854 359 aa13.88□□□□□ -0.19
CPNE1-227ENST00000498056 GLDCP23378 1020 aa13.88□□□□□ -0.19
CPNE1-227ENST00000498056 PAPOLAP51003 745 aaKnown RBP13.88□□□□□ -0.19
CPNE1-227ENST00000498056 YBEYP58557 167 aaPredicted RBP13.88□□□□□ -0.19
CPNE1-227ENST00000498056 GALNT2Q10471 571 aa13.88□□□□□ -0.19
CPNE1-227ENST00000498056 KLF1Q13351 362 aaPredicted RBP13.88□□□□□ -0.19
CPNE1-227ENST00000498056 NOMO1Q15155 1222 aa13.88□□□□□ -0.19
CPNE1-227ENST00000498056 DNTTIP2Q5QJE6 756 aaKnown RBP13.88□□□□□ -0.19
CPNE1-227ENST00000498056 AFMIDQ63HM1 303 aa13.88□□□□□ -0.19
CPNE1-227ENST00000498056 MBLAC2Q68D91 279 aa13.88□□□□□ -0.19
CPNE1-227ENST00000498056 LEKR1Q6ZMV7 388 aa13.88□□□□□ -0.19
CPNE1-227ENST00000498056 ARHGAP36Q6ZRI8 547 aa13.88□□□□□ -0.19
CPNE1-227ENST00000498056 NUDT18Q6ZVK8 323 aa13.88□□□□□ -0.19
CPNE1-227ENST00000498056 ZC3H18Q86VM9 953 aaKnown RBP13.88□□□□□ -0.19
CPNE1-227ENST00000498056 SUGP1Q8IWZ8 645 aaKnown RBP13.88□□□□□ -0.19
CPNE1-227ENST00000498056 KIF18AQ8NI77 898 aa13.88□□□□□ -0.19
CPNE1-227ENST00000498056 ACTL9Q8TC94 416 aa13.88□□□□□ -0.19
CPNE1-227ENST00000498056 LRRN4Q8WUT4 740 aa13.88□□□□□ -0.19
CPNE1-227ENST00000498056 ATG4AQ8WYN0 398 aa13.88□□□□□ -0.19
CPNE1-227ENST00000498056 FEM1AQ9BSK4 669 aa13.88□□□□□ -0.19
CPNE1-227ENST00000498056 VPS51Q9UID3 782 aa13.88□□□□□ -0.19
CPNE1-227ENST00000498056 SLC25A13Q9UJS0 675 aa13.88□□□□□ -0.19
CPNE1-227ENST00000498056 FBXO10Q9UK96 956 aa13.88□□□□□ -0.19
CPNE1-227ENST00000498056 TECTAO75443 2155 aa13.88□□□□□ -0.19
CPNE1-227ENST00000498056 KRBA1A5PL33 1030 aa13.87□□□□□ -0.19
CPNE1-227ENST00000498056 MAN2B1O00754 1011 aa13.87□□□□□ -0.19
CPNE1-227ENST00000498056 ZNF500O60304 480 aaPredicted RBP13.87□□□□□ -0.19
CPNE1-227ENST00000498056 EGFP01133 1207 aa13.87□□□□□ -0.19
CPNE1-227ENST00000498056 MX2P20592 715 aa13.87□□□□□ -0.19
CPNE1-227ENST00000498056 GARSP41250 739 aaKnown RBP13.87□□□□□ -0.19
CPNE1-227ENST00000498056 GRIA2P42262 883 aa13.87□□□□□ -0.19
CPNE1-227ENST00000498056 CTSOP43234 321 aaPredicted RBP13.87□□□□□ -0.19
CPNE1-227ENST00000498056 STK19P49842 368 aaPredicted RBP13.87□□□□□ -0.19
CPNE1-227ENST00000498056 GALK1P51570 392 aa13.87□□□□□ -0.19
CPNE1-227ENST00000498056 PRKCQQ04759 706 aa13.87□□□□□ -0.19
CPNE1-227ENST00000498056 AP1B1Q10567 949 aa13.87□□□□□ -0.19
CPNE1-227ENST00000498056 GRSF1Q12849 480 aaKnown RBP eCLIP13.87□□□□□ -0.19
CPNE1-227ENST00000498056 SLC10A2Q12908 348 aaPredicted RBP13.87□□□□□ -0.19
CPNE1-227ENST00000498056 SERINC3Q13530 473 aa13.87□□□□□ -0.19
CPNE1-227ENST00000498056 DMC1Q14565 340 aa13.87□□□□□ -0.19
CPNE1-227ENST00000498056 UBXN2BQ14CS0 331 aa13.87□□□□□ -0.19
CPNE1-227ENST00000498056 EIF4HQ15056 248 aaKnown RBP13.87□□□□□ -0.19
CPNE1-227ENST00000498056 PDK1Q15118 436 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms