RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 FAM3BP58499 235 aaPredicted RBP4.24□□□□□ -1.73
SMC4-227ENST00000497984 RHAGQ02094 409 aa4.24□□□□□ -1.73
SMC4-227ENST00000497984 ZBTB16Q05516 673 aa4.24□□□□□ -1.73
SMC4-227ENST00000497984 PMS2P11Q13670 270 aa4.24□□□□□ -1.73
SMC4-227ENST00000497984 ARL13BQ3SXY8 428 aa4.24□□□□□ -1.73
SMC4-227ENST00000497984 ZNF672Q499Z4 452 aaPredicted RBP4.24□□□□□ -1.73
SMC4-227ENST00000497984 HIBCHQ6NVY1 386 aaPredicted RBP4.24□□□□□ -1.73
SMC4-227ENST00000497984 TMEM71Q6P5X7 295 aa4.24□□□□□ -1.73
SMC4-227ENST00000497984 AAGABQ6PD74 315 aa4.24□□□□□ -1.73
SMC4-227ENST00000497984 CCDC25Q86WR0 208 aa4.24□□□□□ -1.73
SMC4-227ENST00000497984 FAM185AQ8N0U4 392 aa4.24□□□□□ -1.73
SMC4-227ENST00000497984 MUC20Q8N307 709 aaPredicted RBP4.24□□□□□ -1.73
SMC4-227ENST00000497984 TXLNBQ8N3L3 684 aa4.24□□□□□ -1.73
SMC4-227ENST00000497984 TTC17Q96AE7 1141 aa4.24□□□□□ -1.73
SMC4-227ENST00000497984 RTP4Q96DX8 246 aa4.24□□□□□ -1.73
SMC4-227ENST00000497984 KLHL31Q9H511 634 aa4.24□□□□□ -1.73
SMC4-227ENST00000497984 RAB21Q9UL25 225 aa4.24□□□□□ -1.73
SMC4-227ENST00000497984 SLC4A4Q9Y6R1 1079 aa4.24□□□□□ -1.73
SMC4-227ENST00000497984 A0A0B4J293 547 aa4.23□□□□□ -1.73
SMC4-227ENST00000497984 STMND1H3BQB6 276 aa4.23□□□□□ -1.73
SMC4-227ENST00000497984 VWA5AO00534 786 aa4.23□□□□□ -1.73
SMC4-227ENST00000497984 KIF3BO15066 747 aa4.23□□□□□ -1.73
SMC4-227ENST00000497984 ANXA6P08133 673 aa4.23□□□□□ -1.73
SMC4-227ENST00000497984 HARSP12081 509 aaKnown RBP4.23□□□□□ -1.73
SMC4-227ENST00000497984 ATF3P18847 181 aa4.23□□□□□ -1.73
SMC4-227ENST00000497984 GNLYP22749 145 aa4.23□□□□□ -1.73
SMC4-227ENST00000497984 TRAF2Q12933 501 aa4.23□□□□□ -1.73
SMC4-227ENST00000497984 PKP1Q13835 747 aa4.23□□□□□ -1.73
SMC4-227ENST00000497984 SLC35G1Q2M3R5 365 aa4.23□□□□□ -1.73
SMC4-227ENST00000497984 WBP2NLQ6ICG8 309 aa4.23□□□□□ -1.73
SMC4-227ENST00000497984 H1FNTQ75WM6 255 aaPredicted RBP4.23□□□□□ -1.73
SMC4-227ENST00000497984 TRABD2AQ86V40 505 aa4.23□□□□□ -1.73
SMC4-227ENST00000497984 DGKHQ86XP1 1220 aa4.23□□□□□ -1.73
SMC4-227ENST00000497984 KLBQ86Z14 1044 aa4.23□□□□□ -1.73
SMC4-227ENST00000497984 FMNL3Q8IVF7 1028 aa4.23□□□□□ -1.73
SMC4-227ENST00000497984 CMASQ8NFW8 434 aaPredicted RBP4.23□□□□□ -1.73
SMC4-227ENST00000497984 PCGF6Q9BYE7 350 aa4.23□□□□□ -1.73
SMC4-227ENST00000497984 EPS8L2Q9H6S3 715 aa4.23□□□□□ -1.73
SMC4-227ENST00000497984 STARD7Q9NQZ5 370 aa4.23□□□□□ -1.73
SMC4-227ENST00000497984 SLC52A1Q9NWF4 448 aa4.23□□□□□ -1.73
SMC4-227ENST00000497984 TRPC5Q9UL62 973 aaPredicted RBP4.23□□□□□ -1.73
SMC4-227ENST00000497984 SLC12A4Q9UP95 1085 aa4.23□□□□□ -1.73
SMC4-227ENST00000497984 ZBTB1Q9Y2K1 713 aa4.23□□□□□ -1.73
SMC4-227ENST00000497984 PLSCR5A0PG75 271 aa4.22□□□□□ -1.73
SMC4-227ENST00000497984 LDB2O43679 373 aa4.22□□□□□ -1.73
SMC4-227ENST00000497984 RPP40O75818 363 aaKnown RBP4.22□□□□□ -1.73
SMC4-227ENST00000497984 SOX30O94993 753 aa4.22□□□□□ -1.73
SMC4-227ENST00000497984 GLP2RO95838 553 aa4.22□□□□□ -1.73
SMC4-227ENST00000497984 GRK5P34947 590 aa4.22□□□□□ -1.73
SMC4-227ENST00000497984 PLCB4Q15147 1175 aa4.22□□□□□ -1.73
SMC4-227ENST00000497984 ZNF284Q2VY69 593 aa4.22□□□□□ -1.73
SMC4-227ENST00000497984 IGFN1Q86VF2 1251 aa4.22□□□□□ -1.73
SMC4-227ENST00000497984 TMEM217Q8N7C4 229 aa4.22□□□□□ -1.73
SMC4-227ENST00000497984 LRRC57Q8N9N7 239 aa4.22□□□□□ -1.73
SMC4-227ENST00000497984 NEXN-AS1Q8NBZ9 246 aa4.22□□□□□ -1.73
SMC4-227ENST00000497984 FAM216AQ8WUB2 273 aa4.22□□□□□ -1.73
SMC4-227ENST00000497984 TMED6Q8WW62 240 aa4.22□□□□□ -1.73
SMC4-227ENST00000497984 REXO5Q96IC2 774 aaKnown RBP4.22□□□□□ -1.73
SMC4-227ENST00000497984 PKP4Q99569 1192 aa4.22□□□□□ -1.73
SMC4-227ENST00000497984 IL25Q9H293 177 aa4.22□□□□□ -1.73
SMC4-227ENST00000497984 NECTIN3Q9NQS3 549 aa4.22□□□□□ -1.73
SMC4-227ENST00000497984 COPG1Q9Y678 874 aaKnown RBP4.22□□□□□ -1.73
SMC4-227ENST00000497984 KRTAP9-6A8MVA2 160 aa4.21□□□□□ -1.74
SMC4-227ENST00000497984 SOCS5O75159 536 aa4.21□□□□□ -1.74
SMC4-227ENST00000497984 KRT36O76013 467 aa4.21□□□□□ -1.74
SMC4-227ENST00000497984 PPP3CCP48454 512 aa4.21□□□□□ -1.74
SMC4-227ENST00000497984 AMTP48728 403 aa4.21□□□□□ -1.74
SMC4-227ENST00000497984 KRTAP10-12P60413 245 aa4.21□□□□□ -1.74
SMC4-227ENST00000497984 POU3F1Q03052 451 aaPredicted RBP4.21□□□□□ -1.74
SMC4-227ENST00000497984 GRSF1Q12849 480 aaKnown RBP eCLIP4.21□□□□□ -1.742e-14■■■■■ 48.8
SMC4-227ENST00000497984 HLTFQ14527 1009 aaKnown RBP eCLIP4.21□□□□□ -1.745e-35■■■■■ 127.1
SMC4-227ENST00000497984 ZRSR1Q15695 479 aaKnown RBP4.21□□□□□ -1.74
SMC4-227ENST00000497984 KIF19Q2TAC6 998 aa4.21□□□□□ -1.74
SMC4-227ENST00000497984 LCE1FQ5T754 118 aa4.21□□□□□ -1.74
SMC4-227ENST00000497984 OR14A16Q8NHC5 309 aa4.21□□□□□ -1.74
SMC4-227ENST00000497984 FAM110DQ8TAY7 271 aaPredicted RBP4.21□□□□□ -1.74
SMC4-227ENST00000497984 CLEC4CQ8WTT0 213 aa4.21□□□□□ -1.74
SMC4-227ENST00000497984 HES6Q96HZ4 224 aa4.21□□□□□ -1.74
SMC4-227ENST00000497984 C8orf48Q96LL4 319 aa4.21□□□□□ -1.74
SMC4-227ENST00000497984 INPP4AQ96PE3 977 aaPredicted RBP4.21□□□□□ -1.74
SMC4-227ENST00000497984 FIZ1Q96SL8 496 aa4.21□□□□□ -1.74
SMC4-227ENST00000497984 TBCBQ99426 244 aa4.21□□□□□ -1.74
SMC4-227ENST00000497984 SORBS1Q9BX66 1292 aaKnown RBP4.21□□□□□ -1.74
SMC4-227ENST00000497984 RETREG1Q9H6L5 497 aa4.21□□□□□ -1.74
SMC4-227ENST00000497984 ACTR5Q9H9F9 607 aaPredicted RBP4.21□□□□□ -1.74
SMC4-227ENST00000497984 LOC102724159A0A0B4J2E5 919 aa4.2□□□□□ -1.74
SMC4-227ENST00000497984 NCK2O43639 380 aa4.2□□□□□ -1.74
SMC4-227ENST00000497984 CGAP01215 116 aa4.2□□□□□ -1.74
SMC4-227ENST00000497984 SNRNP70P08621 437 aaKnown RBP4.2□□□□□ -1.74
SMC4-227ENST00000497984 KLRC2P26717 231 aa4.2□□□□□ -1.74
SMC4-227ENST00000497984 AVPR1AP37288 418 aa4.2□□□□□ -1.74
SMC4-227ENST00000497984 TMPRSS3P57727 454 aa4.2□□□□□ -1.74
SMC4-227ENST00000497984 BNC1Q01954 994 aa4.2□□□□□ -1.74
SMC4-227ENST00000497984 ILF3Q12906 894 aaKnown RBP eCLIP4.2□□□□□ -1.748e-14■■■■■ 40.3
SMC4-227ENST00000497984 PWP2Q15269 919 aaKnown RBP4.2□□□□□ -1.74
SMC4-227ENST00000497984 MRGPRG-AS1Q2M3A8 158 aa4.2□□□□□ -1.74
SMC4-227ENST00000497984 VWA5B1Q5TIE3 1220 aa4.2□□□□□ -1.74
SMC4-227ENST00000497984 ARL6IP4Q66PJ3 421 aaKnown RBP4.2□□□□□ -1.74
SMC4-227ENST00000497984 FBXO38Q6PIJ6 1188 aa4.2□□□□□ -1.74
SMC4-227ENST00000497984 MEX3BQ6ZN04 569 aaKnown RBP4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms