RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 PLK1P53350 603 aa11.56□□□□□ -0.56
ERCC8-208ENST00000497892 GALCP54803 685 aa11.56□□□□□ -0.56
ERCC8-208ENST00000497892 ZNF177Q13360 481 aaPredicted RBP11.56□□□□□ -0.56
ERCC8-208ENST00000497892 STARD3Q14849 445 aa11.56□□□□□ -0.56
ERCC8-208ENST00000497892 EFHC2Q5JST6 749 aa11.56□□□□□ -0.56
ERCC8-208ENST00000497892 KIAA1211LQ6NV74 962 aa11.56□□□□□ -0.56
ERCC8-208ENST00000497892 SLFN11Q7Z7L1 901 aa11.56□□□□□ -0.56
ERCC8-208ENST00000497892 APCDD1Q8J025 514 aa11.56□□□□□ -0.56
ERCC8-208ENST00000497892 SUMF1Q8NBK3 374 aa11.56□□□□□ -0.56
ERCC8-208ENST00000497892 OR52K2Q8NGK3 314 aa11.56□□□□□ -0.56
ERCC8-208ENST00000497892 GAB3Q8WWW8 586 aa11.56□□□□□ -0.56
ERCC8-208ENST00000497892 ARHGEF26Q96DR7 871 aa11.56□□□□□ -0.56
ERCC8-208ENST00000497892 ALG14Q96F25 216 aa11.56□□□□□ -0.56
ERCC8-208ENST00000497892 NHEJ1Q9H9Q4 299 aaPredicted RBP11.56□□□□□ -0.56
ERCC8-208ENST00000497892 MPP6Q9NZW5 540 aa11.56□□□□□ -0.56
ERCC8-208ENST00000497892 PLA2G4CQ9UP65 541 aa11.56□□□□□ -0.56
ERCC8-208ENST00000497892 OR51B4Q9Y5P0 310 aa11.56□□□□□ -0.56
ERCC8-208ENST00000497892 RAD54BQ9Y620 910 aa11.56□□□□□ -0.56
ERCC8-208ENST00000497892 WDR87Q6ZQQ6 2873 aa11.56□□□□□ -0.56
ERCC8-208ENST00000497892 PRR23AA6NEV1 266 aa11.55□□□□□ -0.56
ERCC8-208ENST00000497892 FAM72CH0Y354 149 aa11.55□□□□□ -0.56
ERCC8-208ENST00000497892 AKR1B10O60218 316 aa11.55□□□□□ -0.56
ERCC8-208ENST00000497892 SRGAP2O75044 1071 aa11.55□□□□□ -0.56
ERCC8-208ENST00000497892 LRCH4O75427 683 aa11.55□□□□□ -0.56
ERCC8-208ENST00000497892 RPP40O75818 363 aaKnown RBP11.55□□□□□ -0.56
ERCC8-208ENST00000497892 LRIG2O94898 1065 aa11.55□□□□□ -0.56
ERCC8-208ENST00000497892 SRPRAP08240 638 aaKnown RBP11.55□□□□□ -0.56
ERCC8-208ENST00000497892 MZF1P28698 734 aaPredicted RBP11.55□□□□□ -0.56
ERCC8-208ENST00000497892 L1CAMP32004 1257 aa11.55□□□□□ -0.56
ERCC8-208ENST00000497892 SEMA3BQ13214 749 aa11.55□□□□□ -0.56
ERCC8-208ENST00000497892 SRSF5Q13243 272 aaKnown RBP11.55□□□□□ -0.56
ERCC8-208ENST00000497892 FNDC3BQ53EP0 1204 aaKnown RBP11.55□□□□□ -0.56
ERCC8-208ENST00000497892 C6orf118Q5T5N4 469 aa11.55□□□□□ -0.56
ERCC8-208ENST00000497892 FAM72AQ5TYM5 149 aa11.55□□□□□ -0.56
ERCC8-208ENST00000497892 FAM72DQ6L9T8 149 aa11.55□□□□□ -0.56
ERCC8-208ENST00000497892 SCYL2Q6P3W7 929 aa11.55□□□□□ -0.56
ERCC8-208ENST00000497892 TFAP2DQ7Z6R9 452 aa11.55□□□□□ -0.56
ERCC8-208ENST00000497892 SETD3Q86TU7 594 aaPredicted RBP11.55□□□□□ -0.56
ERCC8-208ENST00000497892 FAM72BQ86X60 149 aa11.55□□□□□ -0.56
ERCC8-208ENST00000497892 ARFGAP1Q8N6T3 406 aa11.55□□□□□ -0.56
ERCC8-208ENST00000497892 KDM1BQ8NB78 822 aa11.55□□□□□ -0.56
ERCC8-208ENST00000497892 HMGB4Q8WW32 186 aa11.55□□□□□ -0.56
ERCC8-208ENST00000497892 CTNNBL1Q8WYA6 563 aaPredicted RBP11.55□□□□□ -0.56
ERCC8-208ENST00000497892 MYO19Q96H55 970 aa11.55□□□□□ -0.56
ERCC8-208ENST00000497892 MRGPRX3Q96LB0 322 aa11.55□□□□□ -0.56
ERCC8-208ENST00000497892 CCDC42Q96M95 316 aa11.55□□□□□ -0.56
ERCC8-208ENST00000497892 PEBP4Q96S96 227 aa11.55□□□□□ -0.56
ERCC8-208ENST00000497892 PPP1R9BQ96SB3 815 aa11.55□□□□□ -0.56
ERCC8-208ENST00000497892 FEM1AQ9BSK4 669 aa11.55□□□□□ -0.56
ERCC8-208ENST00000497892 NUP85Q9BW27 656 aa11.55□□□□□ -0.56
ERCC8-208ENST00000497892 PACSIN1Q9BY11 444 aa11.55□□□□□ -0.56
ERCC8-208ENST00000497892 TPSD1Q9BZJ3 242 aa11.55□□□□□ -0.56
ERCC8-208ENST00000497892 RETREG1Q9H6L5 497 aa11.55□□□□□ -0.56
ERCC8-208ENST00000497892 SPTLC3Q9NUV7 552 aa11.55□□□□□ -0.56
ERCC8-208ENST00000497892 BCCIPQ9P287 314 aaKnown RBP eCLIP11.55□□□□□ -0.56
ERCC8-208ENST00000497892 FZD10Q9ULW2 581 aa11.55□□□□□ -0.56
ERCC8-208ENST00000497892 SMG5Q9UPR3 1016 aaKnown RBP11.55□□□□□ -0.56
ERCC8-208ENST00000497892 ZNF292O60281 2723 aa11.55□□□□□ -0.56
ERCC8-208ENST00000497892 FAM186AA6NE01 2351 aa11.55□□□□□ -0.56
ERCC8-208ENST00000497892 EP300Q09472 2414 aaPredicted RBP11.54□□□□□ -0.56
ERCC8-208ENST00000497892 FRYLO94915 3013 aa11.54□□□□□ -0.56
ERCC8-208ENST00000497892 EIF3CLB5ME19 914 aaKnown RBP11.54□□□□□ -0.56
ERCC8-208ENST00000497892 RNF8O76064 485 aa11.54□□□□□ -0.56
ERCC8-208ENST00000497892 LMNAP02545 664 aaKnown RBP11.54□□□□□ -0.56
ERCC8-208ENST00000497892 EPHX1P07099 455 aa11.54□□□□□ -0.56
ERCC8-208ENST00000497892 RHOCP08134 193 aa11.54□□□□□ -0.56
ERCC8-208ENST00000497892 H2AFZP0C0S5 128 aa11.54□□□□□ -0.56
ERCC8-208ENST00000497892 HLA-EP13747 358 aa11.54□□□□□ -0.56
ERCC8-208ENST00000497892 RHOQP17081 205 aa11.54□□□□□ -0.56
ERCC8-208ENST00000497892 NDUFV2P19404 249 aa11.54□□□□□ -0.56
ERCC8-208ENST00000497892 MIPP30301 263 aa11.54□□□□□ -0.56
ERCC8-208ENST00000497892 CDC25BP30305 580 aa11.54□□□□□ -0.56
ERCC8-208ENST00000497892 OR1E1P30953 314 aa11.54□□□□□ -0.56
ERCC8-208ENST00000497892 CTSOP43234 321 aaPredicted RBP11.54□□□□□ -0.56
ERCC8-208ENST00000497892 ECT2LQ008S8 904 aa11.54□□□□□ -0.56
ERCC8-208ENST00000497892 SULT2A1Q06520 285 aa11.54□□□□□ -0.56
ERCC8-208ENST00000497892 CAMK2GQ13555 558 aaPredicted RBP11.54□□□□□ -0.56
ERCC8-208ENST00000497892 SIM2Q14190 667 aaPredicted RBP11.54□□□□□ -0.56
ERCC8-208ENST00000497892 PIGHQ14442 188 aaPredicted RBP11.54□□□□□ -0.56
ERCC8-208ENST00000497892 ACAP1Q15027 740 aa11.54□□□□□ -0.56
ERCC8-208ENST00000497892 RNF219Q5W0B1 726 aaPredicted RBP11.54□□□□□ -0.56
ERCC8-208ENST00000497892 ZNF783Q6ZMS7 281 aa11.54□□□□□ -0.56
ERCC8-208ENST00000497892 CYP4V2Q6ZWL3 525 aaPredicted RBP11.54□□□□□ -0.56
ERCC8-208ENST00000497892 H2AFVQ71UI9 128 aa11.54□□□□□ -0.56
ERCC8-208ENST00000497892 NLRP14Q86W24 1093 aa11.54□□□□□ -0.56
ERCC8-208ENST00000497892 PYROXD2Q8N2H3 581 aa11.54□□□□□ -0.56
ERCC8-208ENST00000497892 NIPA2Q8N8Q9 360 aa11.54□□□□□ -0.56
ERCC8-208ENST00000497892 DCAF4L2Q8NA75 395 aa11.54□□□□□ -0.56
ERCC8-208ENST00000497892 TBC1D31Q96DN5 1066 aa11.54□□□□□ -0.56
ERCC8-208ENST00000497892 MRGPRX1Q96LB2 322 aa11.54□□□□□ -0.56
ERCC8-208ENST00000497892 EIF3CQ99613 913 aaKnown RBP11.54□□□□□ -0.56
ERCC8-208ENST00000497892 NCAPGQ9BPX3 1015 aa11.54□□□□□ -0.56
ERCC8-208ENST00000497892 MAGEB5Q9BZ81 275 aa11.54□□□□□ -0.56
ERCC8-208ENST00000497892 ANAPC7Q9UJX3 599 aa11.54□□□□□ -0.56
ERCC8-208ENST00000497892 VPS28Q9UK41 221 aa11.54□□□□□ -0.56
ERCC8-208ENST00000497892 ERVW-1Q9UQF0 538 aa11.54□□□□□ -0.56
ERCC8-208ENST00000497892 ILVBLA1L0T0 632 aa11.53□□□□□ -0.56
ERCC8-208ENST00000497892 PRPSAP2O60256 369 aa11.53□□□□□ -0.56
ERCC8-208ENST00000497892 SYNCRIPO60506 623 aaKnown RBP11.53□□□□□ -0.56
ERCC8-208ENST00000497892 TMEM253P0C7T8 217 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms