RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 CYP46A1Q9Y6A2 500 aa4.41□□□□□ -1.7
SMC4-225ENST00000497203 COL3A1P02461 1466 aaPredicted RBP4.41□□□□□ -1.7
SMC4-225ENST00000497203 GOLGA6L10A0A0M3HER8 536 aa4.4□□□□□ -1.71
SMC4-225ENST00000497203 SH2D7A6NKC9 451 aaPredicted RBP4.4□□□□□ -1.71
SMC4-225ENST00000497203 MCIDASD6RGH6 385 aa4.4□□□□□ -1.71
SMC4-225ENST00000497203 F5H0A9 414 aaPredicted RBP4.4□□□□□ -1.71
SMC4-225ENST00000497203 PPP6CO00743 305 aa4.4□□□□□ -1.71
SMC4-225ENST00000497203 DSCR3O14972 297 aa4.4□□□□□ -1.71
SMC4-225ENST00000497203 RNF8O76064 485 aa4.4□□□□□ -1.71
SMC4-225ENST00000497203 BAIAP3O94812 1187 aa4.4□□□□□ -1.71
SMC4-225ENST00000497203 RFPL3SP0C7P2 107 aa4.4□□□□□ -1.71
SMC4-225ENST00000497203 PRR35P0CG20 571 aa4.4□□□□□ -1.71
SMC4-225ENST00000497203 ATP1A3P13637 1013 aa4.4□□□□□ -1.71
SMC4-225ENST00000497203 TACR3P29371 465 aa4.4□□□□□ -1.71
SMC4-225ENST00000497203 ARL1P40616 181 aaPredicted RBP4.4□□□□□ -1.71
SMC4-225ENST00000497203 PAFAH1B1P43034 410 aa4.4□□□□□ -1.71
SMC4-225ENST00000497203 MVDP53602 400 aa4.4□□□□□ -1.71
SMC4-225ENST00000497203 CASP6P55212 293 aa4.4□□□□□ -1.71
SMC4-225ENST00000497203 ARHGAP8P85298 464 aa4.4□□□□□ -1.71
SMC4-225ENST00000497203 SHC2P98077 582 aa4.4□□□□□ -1.71
SMC4-225ENST00000497203 GALNT2Q10471 571 aa4.4□□□□□ -1.71
SMC4-225ENST00000497203 SLC14A1Q13336 389 aa4.4□□□□□ -1.71
SMC4-225ENST00000497203 SUPT20HL1Q3ZLR7 823 aa4.4□□□□□ -1.71
SMC4-225ENST00000497203 SLC9C2Q5TAH2 1124 aa4.4□□□□□ -1.71
SMC4-225ENST00000497203 KIAA1614Q5VZ46 1190 aa4.4□□□□□ -1.71
SMC4-225ENST00000497203 FAM180BQ6P0A1 224 aa4.4□□□□□ -1.71
SMC4-225ENST00000497203 C4orf50Q6ZRC1 276 aa4.4□□□□□ -1.71
SMC4-225ENST00000497203 C1orf122Q6ZSJ8 110 aa4.4□□□□□ -1.71
SMC4-225ENST00000497203 YTHDF3Q7Z739 585 aaKnown RBP4.4□□□□□ -1.71
SMC4-225ENST00000497203 TMEM200AQ86VY9 491 aa4.4□□□□□ -1.71
SMC4-225ENST00000497203 SCN4BQ8IWT1 228 aa4.4□□□□□ -1.71
SMC4-225ENST00000497203 ZNF366Q8N895 744 aa4.4□□□□□ -1.71
SMC4-225ENST00000497203 LSM14AQ8ND56 463 aaKnown RBP4.4□□□□□ -1.71
SMC4-225ENST00000497203 ATP2A3Q93084 1043 aa4.4□□□□□ -1.71
SMC4-225ENST00000497203 APOPT1Q96IL0 206 aa4.4□□□□□ -1.71
SMC4-225ENST00000497203 INTS2Q9H0H0 1204 aaKnown RBP4.4□□□□□ -1.71
SMC4-225ENST00000497203 OSBPL5Q9H0X9 879 aaPredicted RBP4.4□□□□□ -1.71
SMC4-225ENST00000497203 PDGFCQ9NRA1 345 aa4.4□□□□□ -1.71
SMC4-225ENST00000497203 PKP3Q9Y446 797 aa4.4□□□□□ -1.71
SMC4-225ENST00000497203 WDR91A4D1P6 747 aa4.39□□□□□ -1.71
SMC4-225ENST00000497203 TMEM247A6NEH6 219 aa4.39□□□□□ -1.71
SMC4-225ENST00000497203 GAGE10A6NGK3 116 aa4.39□□□□□ -1.71
SMC4-225ENST00000497203 TMEM63AO94886 807 aa4.39□□□□□ -1.71
SMC4-225ENST00000497203 RTN3O95197 1032 aaPredicted RBP4.39□□□□□ -1.71
SMC4-225ENST00000497203 DDX58O95786 925 aaKnown RBP4.39□□□□□ -1.71
SMC4-225ENST00000497203 TBX18O95935 607 aa4.39□□□□□ -1.71
SMC4-225ENST00000497203 HLA-DQA2P01906 255 aa4.39□□□□□ -1.71
SMC4-225ENST00000497203 TUBB4AP04350 444 aa4.39□□□□□ -1.71
SMC4-225ENST00000497203 AKR1A1P14550 325 aa4.39□□□□□ -1.71
SMC4-225ENST00000497203 ARSAP15289 507 aa4.39□□□□□ -1.71
SMC4-225ENST00000497203 CERS1P27544 350 aa4.39□□□□□ -1.71
SMC4-225ENST00000497203 STAT1P42224 750 aa4.39□□□□□ -1.71
SMC4-225ENST00000497203 EIF5P55010 431 aaKnown RBP4.39□□□□□ -1.71
SMC4-225ENST00000497203 SSBP2P81877 361 aaPredicted RBP4.39□□□□□ -1.71
SMC4-225ENST00000497203 BYSLQ13895 437 aaKnown RBP4.39□□□□□ -1.71
SMC4-225ENST00000497203 KPNB1Q14974 876 aaKnown RBP4.39□□□□□ -1.71
SMC4-225ENST00000497203 EZH2Q15910 746 aaKnown RBP4.39□□□□□ -1.71
SMC4-225ENST00000497203 MTX3Q5HYI7 312 aa4.39□□□□□ -1.71
SMC4-225ENST00000497203 ZNF626Q68DY1 528 aa4.39□□□□□ -1.71
SMC4-225ENST00000497203 SLC18B1Q6NT16 456 aa4.39□□□□□ -1.71
SMC4-225ENST00000497203 AADACL2Q6P093 401 aa4.39□□□□□ -1.71
SMC4-225ENST00000497203 MTFR2Q6P444 385 aa4.39□□□□□ -1.71
SMC4-225ENST00000497203 DHRS13Q6UX07 377 aa4.39□□□□□ -1.71
SMC4-225ENST00000497203 CLEC4GQ6UXB4 293 aa4.39□□□□□ -1.71
SMC4-225ENST00000497203 NEK8Q86SG6 692 aa4.39□□□□□ -1.71
SMC4-225ENST00000497203 ADGRG6Q86SQ4 1221 aa4.39□□□□□ -1.71
SMC4-225ENST00000497203 RFX6Q8HWS3 928 aa4.39□□□□□ -1.71
SMC4-225ENST00000497203 FAM47BQ8NA70 645 aa4.39□□□□□ -1.71
SMC4-225ENST00000497203 TNIP2Q8NFZ5 429 aa4.39□□□□□ -1.71
SMC4-225ENST00000497203 RFWD2Q8NHY2 731 aa4.39□□□□□ -1.71
SMC4-225ENST00000497203 TBC1D22AQ8WUA7 517 aa4.39□□□□□ -1.71
SMC4-225ENST00000497203 KAT2BQ92831 832 aa4.39□□□□□ -1.71
SMC4-225ENST00000497203 RNFT2Q96EX2 444 aa4.39□□□□□ -1.71
SMC4-225ENST00000497203 PHF7Q9BWX1 381 aaPredicted RBP4.39□□□□□ -1.71
SMC4-225ENST00000497203 NPLQ9BXD5 320 aaPredicted RBP4.39□□□□□ -1.71
SMC4-225ENST00000497203 HDHD5Q9BXW7 423 aa4.39□□□□□ -1.71
SMC4-225ENST00000497203 SEMA4CQ9C0C4 833 aa4.39□□□□□ -1.71
SMC4-225ENST00000497203 PDCL3Q9H2J4 239 aa4.39□□□□□ -1.71
SMC4-225ENST00000497203 MROH8Q9H579 483 aa4.39□□□□□ -1.71
SMC4-225ENST00000497203 OLA1Q9NTK5 396 aaKnown RBP4.39□□□□□ -1.71
SMC4-225ENST00000497203 BEX4Q9NWD9 120 aaPredicted RBP4.39□□□□□ -1.71
SMC4-225ENST00000497203 MAP3K20Q9NYL2 800 aaKnown RBP4.39□□□□□ -1.71
SMC4-225ENST00000497203 OSGIN2Q9Y236 505 aa4.39□□□□□ -1.71
SMC4-225ENST00000497203 DTX4Q9Y2E6 619 aa4.39□□□□□ -1.71
SMC4-225ENST00000497203 A0A087X0M5 115 aa4.38□□□□□ -1.71
SMC4-225ENST00000497203 SMIM35A0A1B0GVV1 85 aa4.38□□□□□ -1.71
SMC4-225ENST00000497203 A0A1B0GX30 115 aa4.38□□□□□ -1.71
SMC4-225ENST00000497203 C16orf96A6NNT2 1141 aa4.38□□□□□ -1.71
SMC4-225ENST00000497203 HBP1O60381 514 aa4.38□□□□□ -1.71
SMC4-225ENST00000497203 LYL1P12980 280 aa4.38□□□□□ -1.71
SMC4-225ENST00000497203 CAPN3P20807 821 aa4.38□□□□□ -1.71
SMC4-225ENST00000497203 KELP23276 732 aa4.38□□□□□ -1.71
SMC4-225ENST00000497203 ABCD3P28288 659 aa4.38□□□□□ -1.71
SMC4-225ENST00000497203 AVPR2P30518 371 aa4.38□□□□□ -1.71
SMC4-225ENST00000497203 NAA25Q14CX7 972 aa4.38□□□□□ -1.71
SMC4-225ENST00000497203 SEC23BQ15437 767 aa4.38□□□□□ -1.71
SMC4-225ENST00000497203 ZNF474Q6S9Z5 364 aaPredicted RBP4.38□□□□□ -1.71
SMC4-225ENST00000497203 TBC1D1Q86TI0 1168 aaPredicted RBP4.38□□□□□ -1.71
SMC4-225ENST00000497203 RHPN2Q8IUC4 686 aa4.38□□□□□ -1.71
SMC4-225ENST00000497203 BRSK2Q8IWQ3 736 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms