RNA–Protein interactions for RNA: ENST00000497106.5

USP54-215, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,773 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-215ENST00000497106 SLCO1A2P46721 670 aa8.56□□□□□ -1.04
USP54-215ENST00000497106 GTF2A1P52655 376 aaPredicted RBP8.56□□□□□ -1.04
USP54-215ENST00000497106 GBE1Q04446 702 aa8.56□□□□□ -1.04
USP54-215ENST00000497106 HNRNPDQ14103 355 aaKnown RBP8.56□□□□□ -1.04
USP54-215ENST00000497106 SPARCL1Q14515 664 aa8.56□□□□□ -1.04
USP54-215ENST00000497106 SIX1Q15475 284 aaPredicted RBP8.56□□□□□ -1.04
USP54-215ENST00000497106 KCTD16Q68DU8 428 aa8.56□□□□□ -1.04
USP54-215ENST00000497106 PQLC3Q8N755 202 aa8.56□□□□□ -1.04
USP54-215ENST00000497106 GPR152Q8TDT2 470 aa8.56□□□□□ -1.04
USP54-215ENST00000497106 POF1BQ8WVV4 589 aa8.56□□□□□ -1.04
USP54-215ENST00000497106 TSPAN17Q96FV3 270 aa8.56□□□□□ -1.04
USP54-215ENST00000497106 TSGA13Q96PP4 275 aa8.56□□□□□ -1.04
USP54-215ENST00000497106 KIAA1522Q9P206 1035 aaPredicted RBP8.56□□□□□ -1.04
USP54-215ENST00000497106 PCDHA11Q9Y5I1 949 aa8.56□□□□□ -1.04
USP54-215ENST00000497106 WDR81Q562E7 1941 aa8.55□□□□□ -1.04
USP54-215ENST00000497106 SNRPAP09012 282 aaKnown RBP8.55□□□□□ -1.04
USP54-215ENST00000497106 HOXB8P17481 243 aaPredicted RBP8.55□□□□□ -1.04
USP54-215ENST00000497106 MAGOHP61326 146 aaKnown RBP8.55□□□□□ -1.04
USP54-215ENST00000497106 PRAMEP78395 509 aa8.55□□□□□ -1.04
USP54-215ENST00000497106 CCDC15Q0P6D6 951 aa8.55□□□□□ -1.04
USP54-215ENST00000497106 SEMA5AQ13591 1074 aa8.55□□□□□ -1.04
USP54-215ENST00000497106 DPYSQ14117 519 aa8.55□□□□□ -1.04
USP54-215ENST00000497106 GRM3Q14832 879 aa8.55□□□□□ -1.04
USP54-215ENST00000497106 GPR158Q5T848 1215 aa8.55□□□□□ -1.04
USP54-215ENST00000497106 CES5AQ6NT32 575 aa8.55□□□□□ -1.04
USP54-215ENST00000497106 LRRC8BQ6P9F7 803 aa8.55□□□□□ -1.04
USP54-215ENST00000497106 TFAP2DQ7Z6R9 452 aa8.55□□□□□ -1.04
USP54-215ENST00000497106 E2F7Q96AV8 911 aa8.55□□□□□ -1.04
USP54-215ENST00000497106 NT5MQ9NPB1 228 aa8.55□□□□□ -1.04
USP54-215ENST00000497106 GRHL1Q9NZI5 618 aa8.55□□□□□ -1.04
USP54-215ENST00000497106 FETUBQ9UGM5 382 aa8.55□□□□□ -1.04
USP54-215ENST00000497106 ACTL7BQ9Y614 415 aa8.55□□□□□ -1.04
USP54-215ENST00000497106 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.55□□□□□ -1.04
USP54-215ENST00000497106 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.55□□□□□ -1.04
USP54-215ENST00000497106 HEATR9A2RTY3 570 aa8.55□□□□□ -1.04
USP54-215ENST00000497106 COPEO14579 308 aa8.55□□□□□ -1.04
USP54-215ENST00000497106 CRTAMO95727 393 aa8.55□□□□□ -1.04
USP54-215ENST00000497106 GPR15P49685 360 aa8.55□□□□□ -1.04
USP54-215ENST00000497106 RHOAP61586 193 aa8.55□□□□□ -1.04
USP54-215ENST00000497106 RALGPS1Q5JS13 557 aa8.55□□□□□ -1.04
USP54-215ENST00000497106 PPP2R2DQ66LE6 453 aa8.55□□□□□ -1.04
USP54-215ENST00000497106 EP400NLQ6ZTU2 488 aa8.55□□□□□ -1.04
USP54-215ENST00000497106 LRRC6Q86X45 466 aa8.55□□□□□ -1.04
USP54-215ENST00000497106 RELL1Q8IUW5 271 aa8.55□□□□□ -1.04
USP54-215ENST00000497106 ZNF689Q96CS4 500 aaPredicted RBP8.55□□□□□ -1.04
USP54-215ENST00000497106 OTUB2Q96DC9 234 aa8.55□□□□□ -1.04
USP54-215ENST00000497106 RTP4Q96DX8 246 aa8.55□□□□□ -1.04
USP54-215ENST00000497106 PKMYT1Q99640 499 aa8.55□□□□□ -1.04
USP54-215ENST00000497106 ZBP1Q9H171 429 aa8.55□□□□□ -1.04
USP54-215ENST00000497106 SAE1Q9UBE0 346 aaPredicted RBP8.55□□□□□ -1.04
USP54-215ENST00000497106 A0A1W2PQ67 120 aa8.55□□□□□ -1.04
USP54-215ENST00000497106 WASH4PA8MWX3 477 aa8.55□□□□□ -1.04
USP54-215ENST00000497106 ABLIM3O94929 683 aa8.55□□□□□ -1.04
USP54-215ENST00000497106 IGSF6O95976 241 aa8.55□□□□□ -1.04
USP54-215ENST00000497106 VIMP08670 466 aaKnown RBP8.55□□□□□ -1.04
USP54-215ENST00000497106 FAM153BP0C7A2 387 aa8.55□□□□□ -1.04
USP54-215ENST00000497106 CALRP27797 417 aaKnown RBP8.55□□□□□ -1.04
USP54-215ENST00000497106 DNAJC3Q13217 504 aa8.55□□□□□ -1.04
USP54-215ENST00000497106 FAM153CQ494X1 144 aa8.55□□□□□ -1.04
USP54-215ENST00000497106 ADGRF1Q5T601 910 aa8.55□□□□□ -1.04
USP54-215ENST00000497106 LMNTD2Q8IXW0 634 aa8.55□□□□□ -1.04
USP54-215ENST00000497106 SRRM1Q8IYB3 904 aaKnown RBP8.55□□□□□ -1.04
USP54-215ENST00000497106 ANKRD42Q8N9B4 389 aa8.55□□□□□ -1.04
USP54-215ENST00000497106 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.55□□□□□ -1.04
USP54-215ENST00000497106 LRRC8CQ8TDW0 803 aa8.55□□□□□ -1.04
USP54-215ENST00000497106 RMDN1Q96DB5 314 aa8.55□□□□□ -1.04
USP54-215ENST00000497106 NUDCD1Q96RS6 583 aa8.55□□□□□ -1.04
USP54-215ENST00000497106 FICDQ9BVA6 458 aa8.55□□□□□ -1.04
USP54-215ENST00000497106 GLOD4Q9HC38 313 aa8.55□□□□□ -1.04
USP54-215ENST00000497106 SMPD4Q9NXE4 827 aa8.55□□□□□ -1.04
USP54-215ENST00000497106 ZDHHC7Q9NXF8 308 aa8.55□□□□□ -1.04
USP54-215ENST00000497106 NR2E1Q9Y466 385 aa8.55□□□□□ -1.04
USP54-215ENST00000497106 HS3ST4Q9Y661 456 aa8.55□□□□□ -1.04
USP54-215ENST00000497106 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.54□□□□□ -1.04
USP54-215ENST00000497106 ILVBLA1L0T0 632 aa8.54□□□□□ -1.04
USP54-215ENST00000497106 DCLK1O15075 740 aa8.54□□□□□ -1.04
USP54-215ENST00000497106 TEX28O15482 410 aa8.54□□□□□ -1.04
USP54-215ENST00000497106 ATP9BO43861 1147 aa8.54□□□□□ -1.04
USP54-215ENST00000497106 TROVE2P10155 538 aaKnown RBP eCLIP8.54□□□□□ -1.04
USP54-215ENST00000497106 PMLP29590 882 aa8.54□□□□□ -1.04
USP54-215ENST00000497106 ATXN1P54253 815 aaKnown RBP8.54□□□□□ -1.04
USP54-215ENST00000497106 MGAT5Q09328 741 aa8.54□□□□□ -1.04
USP54-215ENST00000497106 SLC12A1Q13621 1099 aa8.54□□□□□ -1.04
USP54-215ENST00000497106 PRKD1Q15139 912 aaPredicted RBP8.54□□□□□ -1.04
USP54-215ENST00000497106 AARS2Q5JTZ9 985 aaKnown RBP8.54□□□□□ -1.04
USP54-215ENST00000497106 KLC3Q6P597 504 aa8.54□□□□□ -1.04
USP54-215ENST00000497106 SLC26A11Q86WA9 606 aa8.54□□□□□ -1.04
USP54-215ENST00000497106 PYROXD2Q8N2H3 581 aa8.54□□□□□ -1.04
USP54-215ENST00000497106 TDRD5Q8NAT2 981 aaKnown RBP8.54□□□□□ -1.04
USP54-215ENST00000497106 SMG7Q92540 1137 aaKnown RBP8.54□□□□□ -1.04
USP54-215ENST00000497106 MYRFLQ96LU7 910 aa8.54□□□□□ -1.04
USP54-215ENST00000497106 ZNF840PA6NDX5 716 aa8.54□□□□□ -1.04
USP54-215ENST00000497106 EBAG9O00559 213 aa8.54□□□□□ -1.04
USP54-215ENST00000497106 NDUFAB1O14561 156 aa8.54□□□□□ -1.04
USP54-215ENST00000497106 TNFRSF10BO14763 440 aa8.54□□□□□ -1.04
USP54-215ENST00000497106 TIMM44O43615 452 aa8.54□□□□□ -1.04
USP54-215ENST00000497106 TBL1XO60907 577 aa8.54□□□□□ -1.04
USP54-215ENST00000497106 EN2P19622 333 aaPredicted RBP8.54□□□□□ -1.04
USP54-215ENST00000497106 PSMB4P28070 264 aa8.54□□□□□ -1.04
USP54-215ENST00000497106 IFI35P80217 286 aaPredicted RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms