RNA–Protein interactions for RNA: ENST00000496677.5

CLDN12-213, Transcript of claudin 12, humanhuman

TSL 1 (best)

Gene CLDN12, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12-213ENST00000496677 AADATQ8N5Z0 425 aa12.73□□□□□ -0.37
CLDN12-213ENST00000496677 CFAP57Q96MR6 1250 aa12.73□□□□□ -0.37
CLDN12-213ENST00000496677 DCBLD2Q96PD2 775 aa12.73□□□□□ -0.37
CLDN12-213ENST00000496677 HAPLN3Q96S86 360 aa12.73□□□□□ -0.37
CLDN12-213ENST00000496677 PSMB7Q99436 277 aa12.73□□□□□ -0.37
CLDN12-213ENST00000496677 SIK2Q9H0K1 926 aa12.73□□□□□ -0.37
CLDN12-213ENST00000496677 RAB6CQ9H0N0 254 aa12.73□□□□□ -0.37
CLDN12-213ENST00000496677 MIR1-1HGQ9H1L0 117 aa12.73□□□□□ -0.37
CLDN12-213ENST00000496677 NEUROG2Q9H2A3 272 aa12.73□□□□□ -0.37
CLDN12-213ENST00000496677 NLRC4Q9NPP4 1024 aa12.73□□□□□ -0.37
CLDN12-213ENST00000496677 FBXL12Q9NXK8 326 aa12.73□□□□□ -0.37
CLDN12-213ENST00000496677 TMEM63CQ9P1W3 806 aa12.73□□□□□ -0.37
CLDN12-213ENST00000496677 ANGPTL2Q9UKU9 493 aa12.73□□□□□ -0.37
CLDN12-213ENST00000496677 RNASEH1O60930 286 aaKnown RBP12.72□□□□□ -0.37
CLDN12-213ENST00000496677 MBD3O95983 291 aa12.72□□□□□ -0.37
CLDN12-213ENST00000496677 GOT1P17174 413 aa12.72□□□□□ -0.37
CLDN12-213ENST00000496677 CD27P26842 260 aa12.72□□□□□ -0.37
CLDN12-213ENST00000496677 STAT1P42224 750 aa12.72□□□□□ -0.37
CLDN12-213ENST00000496677 NUMBP49757 651 aa12.72□□□□□ -0.37
CLDN12-213ENST00000496677 ZNF252P-AS1Q0IIN9 211 aa12.72□□□□□ -0.37
CLDN12-213ENST00000496677 ACBD5Q5T8D3 534 aaPredicted RBP12.72□□□□□ -0.37
CLDN12-213ENST00000496677 RNF219Q5W0B1 726 aaPredicted RBP12.72□□□□□ -0.37
CLDN12-213ENST00000496677 KIAA0895LQ68EN5 471 aa12.72□□□□□ -0.37
CLDN12-213ENST00000496677 HDDC3Q8N4P3 179 aa12.72□□□□□ -0.37
CLDN12-213ENST00000496677 SLC30A5Q8TAD4 765 aa12.72□□□□□ -0.37
CLDN12-213ENST00000496677 CENPIQ92674 756 aaPredicted RBP12.72□□□□□ -0.37
CLDN12-213ENST00000496677 PPP1R9BQ96SB3 815 aa12.72□□□□□ -0.37
CLDN12-213ENST00000496677 EBF2Q9HAK2 575 aa12.72□□□□□ -0.37
CLDN12-213ENST00000496677 IL21RQ9HBE5 538 aa12.72□□□□□ -0.37
CLDN12-213ENST00000496677 TM9SF3Q9HD45 589 aa12.72□□□□□ -0.37
CLDN12-213ENST00000496677 FZD4Q9ULV1 537 aa12.72□□□□□ -0.37
CLDN12-213ENST00000496677 NCKAP1Q9Y2A7 1128 aa12.72□□□□□ -0.37
CLDN12-213ENST00000496677 MAP1BP46821 2468 aaKnown RBP12.71□□□□□ -0.37
CLDN12-213ENST00000496677 SPAARA0A1B0GVQ0 90 aa12.71□□□□□ -0.37
CLDN12-213ENST00000496677 A0A1B0GVT2 93 aa12.71□□□□□ -0.37
CLDN12-213ENST00000496677 A0A1W2PP55 124 aa12.71□□□□□ -0.37
CLDN12-213ENST00000496677 GOLGA6L22H0YM25 854 aa12.71□□□□□ -0.37
CLDN12-213ENST00000496677 SH3BP5O60239 455 aa12.71□□□□□ -0.37
CLDN12-213ENST00000496677 CBFA2T3O75081 653 aa12.71□□□□□ -0.37
CLDN12-213ENST00000496677 TOP3BO95985 862 aaKnown RBP12.71□□□□□ -0.37
CLDN12-213ENST00000496677 MT-CO1P00395 513 aa12.71□□□□□ -0.37
CLDN12-213ENST00000496677 TPM2P07951 284 aa12.71□□□□□ -0.37
CLDN12-213ENST00000496677 ZNF883P0CG24 379 aa12.71□□□□□ -0.37
CLDN12-213ENST00000496677 ATP1A3P13637 1013 aa12.71□□□□□ -0.37
CLDN12-213ENST00000496677 C5AR1P21730 350 aa12.71□□□□□ -0.37
CLDN12-213ENST00000496677 DRD3P35462 400 aa12.71□□□□□ -0.37
CLDN12-213ENST00000496677 CSNK1EP49674 416 aaKnown RBP12.71□□□□□ -0.37
CLDN12-213ENST00000496677 AFF3P51826 1226 aaKnown RBP12.71□□□□□ -0.37
CLDN12-213ENST00000496677 METAP1P53582 386 aa12.71□□□□□ -0.37
CLDN12-213ENST00000496677 GSCP56915 257 aaPredicted RBP12.71□□□□□ -0.37
CLDN12-213ENST00000496677 TYRO3Q06418 890 aa12.71□□□□□ -0.37
CLDN12-213ENST00000496677 ELAVL3Q14576 367 aaKnown RBP12.71□□□□□ -0.37
CLDN12-213ENST00000496677 DLG2Q15700 870 aa12.71□□□□□ -0.37
CLDN12-213ENST00000496677 HLA-BQ31612 363 aa12.71□□□□□ -0.37
CLDN12-213ENST00000496677 CCDC14Q49A88 953 aa12.71□□□□□ -0.37
CLDN12-213ENST00000496677 KCNT1Q5JUK3 1230 aa12.71□□□□□ -0.37
CLDN12-213ENST00000496677 NCEH1Q6PIU2 408 aa12.71□□□□□ -0.37
CLDN12-213ENST00000496677 TRIM72Q6ZMU5 477 aa12.71□□□□□ -0.37
CLDN12-213ENST00000496677 SND1Q7KZF4 910 aaKnown RBP eCLIP12.71□□□□□ -0.374e-8■■■■□ 24.7
CLDN12-213ENST00000496677 SETD3Q86TU7 594 aaPredicted RBP12.71□□□□□ -0.37
CLDN12-213ENST00000496677 SH2D3CQ8N5H7 860 aa12.71□□□□□ -0.37
CLDN12-213ENST00000496677 EMC1Q8N766 993 aa12.71□□□□□ -0.37
CLDN12-213ENST00000496677 MSANTD4Q8NCY6 345 aa12.71□□□□□ -0.37
CLDN12-213ENST00000496677 JOSD2Q8TAC2 188 aa12.71□□□□□ -0.37
CLDN12-213ENST00000496677 CAMK1GQ96NX5 476 aa12.71□□□□□ -0.37
CLDN12-213ENST00000496677 SPAG5Q96R06 1193 aa12.71□□□□□ -0.37
CLDN12-213ENST00000496677 SLC32A1Q9H598 525 aa12.71□□□□□ -0.37
CLDN12-213ENST00000496677 METTL5Q9NRN9 209 aaKnown RBP12.71□□□□□ -0.37
CLDN12-213ENST00000496677 MPP6Q9NZW5 540 aa12.71□□□□□ -0.37
CLDN12-213ENST00000496677 SARDHQ9UL12 918 aa12.71□□□□□ -0.37
CLDN12-213ENST00000496677 PPM1HQ9ULR3 514 aa12.71□□□□□ -0.37
CLDN12-213ENST00000496677 HS3ST2Q9Y278 367 aa12.71□□□□□ -0.37
CLDN12-213ENST00000496677 PAXBP1Q9Y5B6 917 aa12.71□□□□□ -0.37
CLDN12-213ENST00000496677 A0A1W2PPC4 97 aa12.7□□□□□ -0.38
CLDN12-213ENST00000496677 TCRBV5S1A1TA0A578 114 aa12.7□□□□□ -0.38
CLDN12-213ENST00000496677 C2CD4BA6NLJ0 364 aa12.7□□□□□ -0.38
CLDN12-213ENST00000496677 E9PAM4 449 aa12.7□□□□□ -0.38
CLDN12-213ENST00000496677 MCF2LO15068 1137 aa12.7□□□□□ -0.38
CLDN12-213ENST00000496677 RNASEH2AO75792 299 aaKnown RBP12.7□□□□□ -0.38
CLDN12-213ENST00000496677 FSBPO95073 299 aa12.7□□□□□ -0.38
CLDN12-213ENST00000496677 ADH1BP00325 375 aa12.7□□□□□ -0.38
CLDN12-213ENST00000496677 RDXP35241 583 aaKnown RBP12.7□□□□□ -0.38
CLDN12-213ENST00000496677 ADRA1BP35368 520 aa12.7□□□□□ -0.38
CLDN12-213ENST00000496677 NNMTP40261 264 aa12.7□□□□□ -0.38
CLDN12-213ENST00000496677 PTPN9P43378 593 aa12.7□□□□□ -0.38
CLDN12-213ENST00000496677 GRIA4P48058 902 aa12.7□□□□□ -0.38
CLDN12-213ENST00000496677 PSMD8P48556 350 aa12.7□□□□□ -0.38
CLDN12-213ENST00000496677 CCR5P51681 352 aa12.7□□□□□ -0.38
CLDN12-213ENST00000496677 NRG1Q02297 640 aaPredicted RBP12.7□□□□□ -0.38
CLDN12-213ENST00000496677 UBXN1Q04323 297 aa12.7□□□□□ -0.38
CLDN12-213ENST00000496677 SFSWAPQ12872 951 aaKnown RBP12.7□□□□□ -0.38
CLDN12-213ENST00000496677 CLEC16AQ2KHT3 1053 aa12.7□□□□□ -0.38
CLDN12-213ENST00000496677 KIF19Q2TAC6 998 aa12.7□□□□□ -0.38
CLDN12-213ENST00000496677 MANEALQ5VSG8 457 aa12.7□□□□□ -0.38
CLDN12-213ENST00000496677 IL27RAQ6UWB1 636 aa12.7□□□□□ -0.38
CLDN12-213ENST00000496677 PHLDB2Q86SQ0 1253 aa12.7□□□□□ -0.38
CLDN12-213ENST00000496677 PHF13Q86YI8 300 aaPredicted RBP12.7□□□□□ -0.38
CLDN12-213ENST00000496677 NEK11Q8NG66 645 aa12.7□□□□□ -0.38
CLDN12-213ENST00000496677 OR2T34Q8NGX1 318 aa12.7□□□□□ -0.38
CLDN12-213ENST00000496677 RXFP2Q8WXD0 754 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms