RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 ALG14Q96F25 216 aa16.16■□□□□ 0.18
HDAC4-213ENST00000496347 RPL10LQ96L21 214 aaKnown RBP16.16■□□□□ 0.18
HDAC4-213ENST00000496347 C2orf49Q9BVC5 232 aaPredicted RBP16.16■□□□□ 0.18
HDAC4-213ENST00000496347 MUC3BQ9H195 1237 aa16.16■□□□□ 0.18
HDAC4-213ENST00000496347 MIR1-1HGQ9H1L0 117 aa16.16■□□□□ 0.18
HDAC4-213ENST00000496347 SLC32A1Q9H598 525 aa16.16■□□□□ 0.18
HDAC4-213ENST00000496347 OSGEPQ9NPF4 335 aa16.16■□□□□ 0.18
HDAC4-213ENST00000496347 FBXL12Q9NXK8 326 aa16.16■□□□□ 0.18
HDAC4-213ENST00000496347 ADAMTS1Q9UHI8 967 aa16.16■□□□□ 0.18
HDAC4-213ENST00000496347 SLCO3A1Q9UIG8 710 aa16.16■□□□□ 0.18
HDAC4-213ENST00000496347 TPX2Q9ULW0 747 aaKnown RBP16.16■□□□□ 0.18
HDAC4-213ENST00000496347 MYO6Q9UM54 1294 aa16.16■□□□□ 0.18
HDAC4-213ENST00000496347 HS3ST2Q9Y278 367 aa16.16■□□□□ 0.18
HDAC4-213ENST00000496347 OR51B4Q9Y5P0 310 aa16.16■□□□□ 0.18
HDAC4-213ENST00000496347 USP24Q9UPU5 2620 aa16.16■□□□□ 0.18
HDAC4-213ENST00000496347 E9PAM4 449 aa16.15■□□□□ 0.18
HDAC4-213ENST00000496347 ALOX15BO15296 676 aa16.15■□□□□ 0.18
HDAC4-213ENST00000496347 MID1O15344 667 aa16.15■□□□□ 0.18
HDAC4-213ENST00000496347 ATP9BO43861 1147 aa16.15■□□□□ 0.18
HDAC4-213ENST00000496347 PLXNA2O75051 1894 aa16.15■□□□□ 0.18
HDAC4-213ENST00000496347 CER1O95813 267 aa16.15■□□□□ 0.18
HDAC4-213ENST00000496347 CALB1P05937 261 aa16.15■□□□□ 0.18
HDAC4-213ENST00000496347 RHOCP08134 193 aa16.15■□□□□ 0.18
HDAC4-213ENST00000496347 C5AR1P21730 350 aa16.15■□□□□ 0.18
HDAC4-213ENST00000496347 MAOBP27338 520 aa16.15■□□□□ 0.18
HDAC4-213ENST00000496347 PTPN9P43378 593 aa16.15■□□□□ 0.18
HDAC4-213ENST00000496347 PSMD8P48556 350 aa16.15■□□□□ 0.18
HDAC4-213ENST00000496347 ZNF252P-AS1Q0IIN9 211 aa16.15■□□□□ 0.18
HDAC4-213ENST00000496347 CLEC16AQ2KHT3 1053 aa16.15■□□□□ 0.18
HDAC4-213ENST00000496347 N4BP2L1Q5TBK1 243 aaPredicted RBP16.15■□□□□ 0.18
HDAC4-213ENST00000496347 CAVIN1Q6NZI2 390 aaKnown RBP16.15■□□□□ 0.18
HDAC4-213ENST00000496347 ZNF783Q6ZMS7 281 aa16.15■□□□□ 0.18
HDAC4-213ENST00000496347 PIP4P1Q86T03 277 aa16.15■□□□□ 0.18
HDAC4-213ENST00000496347 FAM131BQ86XD5 332 aa16.15■□□□□ 0.18
HDAC4-213ENST00000496347 MMAAQ8IVH4 418 aaKnown RBP16.15■□□□□ 0.18
HDAC4-213ENST00000496347 C3orf20Q8ND61 904 aa16.15■□□□□ 0.18
HDAC4-213ENST00000496347 OR52K2Q8NGK3 314 aa16.15■□□□□ 0.18
HDAC4-213ENST00000496347 GANCQ8TET4 914 aa16.15■□□□□ 0.18
HDAC4-213ENST00000496347 FRS2Q8WU20 508 aa16.15■□□□□ 0.18
HDAC4-213ENST00000496347 PTPRN2Q92932 1015 aa16.15■□□□□ 0.18
HDAC4-213ENST00000496347 EIF2B4Q9UI10 523 aaKnown RBP16.15■□□□□ 0.18
HDAC4-213ENST00000496347 IGF2RP11717 2491 aa16.14■□□□□ 0.18
HDAC4-213ENST00000496347 SPEGQ15772 3267 aa16.14■□□□□ 0.17
HDAC4-213ENST00000496347 A0A1W2PP55 124 aa16.14■□□□□ 0.17
HDAC4-213ENST00000496347 FAM170AA1A519 330 aa16.14■□□□□ 0.17
HDAC4-213ENST00000496347 LRRC72A6NJI9 287 aa16.14■□□□□ 0.17
HDAC4-213ENST00000496347 C2CD4BA6NLJ0 364 aa16.14■□□□□ 0.17
HDAC4-213ENST00000496347 DRGXA6NNA5 263 aa16.14■□□□□ 0.17
HDAC4-213ENST00000496347 SMTNL1A8MU46 457 aa16.14■□□□□ 0.17
HDAC4-213ENST00000496347 GJB3O75712 270 aa16.14■□□□□ 0.17
HDAC4-213ENST00000496347 ENDOD1O94919 500 aa16.14■□□□□ 0.17
HDAC4-213ENST00000496347 FERP16591 822 aa16.14■□□□□ 0.17
HDAC4-213ENST00000496347 CD27P26842 260 aa16.14■□□□□ 0.17
HDAC4-213ENST00000496347 GRIA4P48058 902 aa16.14■□□□□ 0.17
HDAC4-213ENST00000496347 CLCN6P51797 869 aa16.14■□□□□ 0.17
HDAC4-213ENST00000496347 KRT83P78385 493 aa16.14■□□□□ 0.17
HDAC4-213ENST00000496347 NRG1Q02297 640 aaPredicted RBP16.14■□□□□ 0.17
HDAC4-213ENST00000496347 C1QBPQ07021 282 aaKnown RBP16.14■□□□□ 0.17
HDAC4-213ENST00000496347 PTP4A2Q12974 167 aa16.14■□□□□ 0.17
HDAC4-213ENST00000496347 TEAD4Q15561 434 aa16.14■□□□□ 0.17
HDAC4-213ENST00000496347 ARL13BQ3SXY8 428 aa16.14■□□□□ 0.17
HDAC4-213ENST00000496347 ALFQ53S48 1182 aa16.14■□□□□ 0.17
HDAC4-213ENST00000496347 MON1BQ7L1V2 547 aa16.14■□□□□ 0.17
HDAC4-213ENST00000496347 STRADAQ7RTN6 431 aa16.14■□□□□ 0.17
HDAC4-213ENST00000496347 STK40Q8N2I9 435 aa16.14■□□□□ 0.17
HDAC4-213ENST00000496347 EMC1Q8N766 993 aa16.14■□□□□ 0.17
HDAC4-213ENST00000496347 SLC30A5Q8TAD4 765 aa16.14■□□□□ 0.17
HDAC4-213ENST00000496347 OR8D1Q8WZ84 308 aa16.14■□□□□ 0.17
HDAC4-213ENST00000496347 BIRC7Q96CA5 298 aa16.14■□□□□ 0.17
HDAC4-213ENST00000496347 OMDQ99983 421 aa16.14■□□□□ 0.17
HDAC4-213ENST00000496347 ADAM22Q9P0K1 906 aa16.14■□□□□ 0.17
HDAC4-213ENST00000496347 PPARGC1AQ9UBK2 798 aaKnown RBP16.14■□□□□ 0.17
HDAC4-213ENST00000496347 SERGEFQ9UGK8 458 aa16.14■□□□□ 0.17
HDAC4-213ENST00000496347 ANGPTL2Q9UKU9 493 aa16.14■□□□□ 0.17
HDAC4-213ENST00000496347 TMEM131Q92545 1883 aa16.14■□□□□ 0.17
HDAC4-213ENST00000496347 SLC7A4O43246 635 aa16.13■□□□□ 0.17
HDAC4-213ENST00000496347 RNASEH2AO75792 299 aaKnown RBP16.13■□□□□ 0.17
HDAC4-213ENST00000496347 CNTN5O94779 1100 aa16.13■□□□□ 0.17
HDAC4-213ENST00000496347 ZNF883P0CG24 379 aa16.13■□□□□ 0.17
HDAC4-213ENST00000496347 GOT1P17174 413 aa16.13■□□□□ 0.17
HDAC4-213ENST00000496347 OR1E1P30953 314 aa16.13■□□□□ 0.17
HDAC4-213ENST00000496347 SLC8A1P32418 973 aa16.13■□□□□ 0.17
HDAC4-213ENST00000496347 ADPRHP54922 357 aa16.13■□□□□ 0.17
HDAC4-213ENST00000496347 ATP11AP98196 1134 aa16.13■□□□□ 0.17
HDAC4-213ENST00000496347 HNRNPDQ14103 355 aaKnown RBP16.13■□□□□ 0.17
HDAC4-213ENST00000496347 FAM46CQ5VWP2 391 aa16.13■□□□□ 0.17
HDAC4-213ENST00000496347 KIAA0895LQ68EN5 471 aa16.13■□□□□ 0.17
HDAC4-213ENST00000496347 PPP1R2P3Q6NXS1 205 aa16.13■□□□□ 0.17
HDAC4-213ENST00000496347 TFAP2DQ7Z6R9 452 aa16.13■□□□□ 0.17
HDAC4-213ENST00000496347 SH2D3CQ8N5H7 860 aa16.13■□□□□ 0.17
HDAC4-213ENST00000496347 AADATQ8N5Z0 425 aa16.13■□□□□ 0.17
HDAC4-213ENST00000496347 DEFB124Q8NES8 71 aa16.13■□□□□ 0.17
HDAC4-213ENST00000496347 OR2T34Q8NGX1 318 aa16.13■□□□□ 0.17
HDAC4-213ENST00000496347 RXFP2Q8WXD0 754 aa16.13■□□□□ 0.17
HDAC4-213ENST00000496347 FAM131CQ96AQ9 280 aa16.13■□□□□ 0.17
HDAC4-213ENST00000496347 CCDC114Q96M63 670 aa16.13■□□□□ 0.17
HDAC4-213ENST00000496347 PCDHB18PQ96TA0 734 aa16.13■□□□□ 0.17
HDAC4-213ENST00000496347 FAM129BQ96TA1 746 aa16.13■□□□□ 0.17
HDAC4-213ENST00000496347 ZYG11BQ9C0D3 744 aa16.13■□□□□ 0.17
HDAC4-213ENST00000496347 RETREG1Q9H6L5 497 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms