RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 SLC35G2Q8TBE7 412 aa7.08□□□□□ -1.28
VIM-207ENST00000495528 MAP7D2Q96T17 732 aa7.08□□□□□ -1.28
VIM-207ENST00000495528 GLT8D2Q9H1C3 349 aa7.08□□□□□ -1.28
VIM-207ENST00000495528 MAN1C1Q9NR34 630 aa7.08□□□□□ -1.28
VIM-207ENST00000495528 NRBP2Q9NSY0 501 aa7.08□□□□□ -1.28
VIM-207ENST00000495528 AURKAIP1Q9NWT8 199 aaPredicted RBP7.08□□□□□ -1.28
VIM-207ENST00000495528 POLHQ9Y253 713 aa7.08□□□□□ -1.28
VIM-207ENST00000495528 KMT2EQ8IZD2 1858 aa7.08□□□□□ -1.28
VIM-207ENST00000495528 LOXHD1Q8IVV2 1947 aa7.07□□□□□ -1.28
VIM-207ENST00000495528 ZNF185O15231 689 aa7.07□□□□□ -1.28
VIM-207ENST00000495528 PI15O43692 258 aa7.07□□□□□ -1.28
VIM-207ENST00000495528 PRSS23O95084 383 aa7.07□□□□□ -1.28
VIM-207ENST00000495528 HSP90AA1P07900 732 aaKnown RBP7.07□□□□□ -1.28
VIM-207ENST00000495528 GALTP07902 379 aa7.07□□□□□ -1.28
VIM-207ENST00000495528 CTSAP10619 480 aa7.07□□□□□ -1.28
VIM-207ENST00000495528 MTHFD1P11586 935 aaKnown RBP7.07□□□□□ -1.28
VIM-207ENST00000495528 SLC6A4P31645 630 aa7.07□□□□□ -1.28
VIM-207ENST00000495528 CIITAP33076 1130 aa7.07□□□□□ -1.28
VIM-207ENST00000495528 CLCN5P51795 746 aa7.07□□□□□ -1.28
VIM-207ENST00000495528 DRP2Q13474 957 aa7.07□□□□□ -1.28
VIM-207ENST00000495528 UGCGQ16739 394 aa7.07□□□□□ -1.28
VIM-207ENST00000495528 LONRF3Q496Y0 759 aa7.07□□□□□ -1.28
VIM-207ENST00000495528 FLYWCH1Q4VC44 716 aa7.07□□□□□ -1.28
VIM-207ENST00000495528 PABPC1LQ4VXU2 614 aaKnown RBP7.07□□□□□ -1.28
VIM-207ENST00000495528 RABL3Q5HYI8 236 aa7.07□□□□□ -1.28
VIM-207ENST00000495528 THEMIS2Q5TEJ8 643 aa7.07□□□□□ -1.28
VIM-207ENST00000495528 B3GNT9Q6UX72 402 aa7.07□□□□□ -1.28
VIM-207ENST00000495528 TCEAL8Q8IYN2 117 aa7.07□□□□□ -1.28
VIM-207ENST00000495528 TDRD5Q8NAT2 981 aaKnown RBP7.07□□□□□ -1.28
VIM-207ENST00000495528 SLC22A17Q8WUG5 538 aa7.07□□□□□ -1.28
VIM-207ENST00000495528 GJA10Q969M2 543 aa7.07□□□□□ -1.28
VIM-207ENST00000495528 LENG9Q96B70 501 aa7.07□□□□□ -1.28
VIM-207ENST00000495528 C1GALT1C1Q96EU7 318 aa7.07□□□□□ -1.28
VIM-207ENST00000495528 FAM167AQ96KS9 214 aa7.07□□□□□ -1.28
VIM-207ENST00000495528 TAAR9Q96RI9 348 aa7.07□□□□□ -1.28
VIM-207ENST00000495528 CGRRF1Q99675 332 aa7.07□□□□□ -1.28
VIM-207ENST00000495528 ACO2Q99798 780 aaKnown RBP7.07□□□□□ -1.28
VIM-207ENST00000495528 TEX101Q9BY14 249 aa7.07□□□□□ -1.28
VIM-207ENST00000495528 ZMYND12Q9H0C1 365 aa7.07□□□□□ -1.28
VIM-207ENST00000495528 ZBP1Q9H171 429 aa7.07□□□□□ -1.28
VIM-207ENST00000495528 MFSD1Q9H3U5 465 aa7.07□□□□□ -1.28
VIM-207ENST00000495528 ZNF768Q9H5H4 540 aaKnown RBP7.07□□□□□ -1.28
VIM-207ENST00000495528 NRDE2Q9H7Z3 1164 aa7.07□□□□□ -1.28
VIM-207ENST00000495528 SLAMF7Q9NQ25 335 aa7.07□□□□□ -1.28
VIM-207ENST00000495528 LMBRD1Q9NUN5 540 aa7.07□□□□□ -1.28
VIM-207ENST00000495528 PARPBPQ9NWS1 579 aa7.07□□□□□ -1.28
VIM-207ENST00000495528 CEP72Q9P209 647 aa7.07□□□□□ -1.28
VIM-207ENST00000495528 MYO10Q9HD67 2058 aa7.07□□□□□ -1.28
VIM-207ENST00000495528 A0A087WZ62 844 aa7.06□□□□□ -1.28
VIM-207ENST00000495528 ESYT2A0FGR8 921 aa7.06□□□□□ -1.28
VIM-207ENST00000495528 F2RL2O00254 374 aa7.06□□□□□ -1.28
VIM-207ENST00000495528 MSH4O15457 936 aa7.06□□□□□ -1.28
VIM-207ENST00000495528 ZC3H11AO75152 810 aaKnown RBP eCLIP7.06□□□□□ -1.28
VIM-207ENST00000495528 RECQL4O94761 1208 aa7.06□□□□□ -1.28
VIM-207ENST00000495528 STBD1O95210 358 aa7.06□□□□□ -1.28
VIM-207ENST00000495528 HK3P52790 923 aa7.06□□□□□ -1.28
VIM-207ENST00000495528 SETQ01105 290 aaPredicted RBP7.06□□□□□ -1.28
VIM-207ENST00000495528 PRKCEQ02156 737 aa7.06□□□□□ -1.28
VIM-207ENST00000495528 MINDY4Q4G0A6 757 aa7.06□□□□□ -1.28
VIM-207ENST00000495528 GPR149Q86SP6 731 aa7.06□□□□□ -1.28
VIM-207ENST00000495528 ZNF280BQ86YH2 543 aa7.06□□□□□ -1.28
VIM-207ENST00000495528 ADSSL1Q8N142 457 aa7.06□□□□□ -1.28
VIM-207ENST00000495528 ZBTB34Q8NCN2 500 aa7.06□□□□□ -1.28
VIM-207ENST00000495528 TBC1D15Q8TC07 691 aa7.06□□□□□ -1.28
VIM-207ENST00000495528 IGSF21Q96ID5 467 aa7.06□□□□□ -1.28
VIM-207ENST00000495528 SCLT1Q96NL6 688 aa7.06□□□□□ -1.28
VIM-207ENST00000495528 NEU1Q99519 415 aa7.06□□□□□ -1.28
VIM-207ENST00000495528 SH2D3AQ9BRG2 576 aa7.06□□□□□ -1.28
VIM-207ENST00000495528 VN1R3Q9BXE9 311 aa7.06□□□□□ -1.28
VIM-207ENST00000495528 PACSIN1Q9BY11 444 aa7.06□□□□□ -1.28
VIM-207ENST00000495528 MRPL9Q9BYD2 267 aaKnown RBP7.06□□□□□ -1.28
VIM-207ENST00000495528 GCOM2Q9BZD3 368 aaPredicted RBP7.06□□□□□ -1.28
VIM-207ENST00000495528 C6orf50Q9HD87 102 aa7.06□□□□□ -1.28
VIM-207ENST00000495528 CHST12Q9NRB3 414 aa7.06□□□□□ -1.28
VIM-207ENST00000495528 TBC1D13Q9NVG8 400 aa7.06□□□□□ -1.28
VIM-207ENST00000495528 DACT1Q9NYF0 836 aa7.06□□□□□ -1.28
VIM-207ENST00000495528 EVPLQ92817 2033 aa7.06□□□□□ -1.28
VIM-207ENST00000495528 PLXNA3P51805 1871 aa7.05□□□□□ -1.28
VIM-207ENST00000495528 IGKV6-21A0A0C4DH24 114 aa7.05□□□□□ -1.28
VIM-207ENST00000495528 CCDC196A0A1B0GTZ2 297 aa7.05□□□□□ -1.28
VIM-207ENST00000495528 TMEM150BA6NC51 233 aa7.05□□□□□ -1.28
VIM-207ENST00000495528 AHRRA9YTQ3 701 aa7.05□□□□□ -1.28
VIM-207ENST00000495528 H3BUI4 141 aa7.05□□□□□ -1.28
VIM-207ENST00000495528 CPLX1O14810 134 aa7.05□□□□□ -1.28
VIM-207ENST00000495528 SLC16A6O15403 523 aa7.05□□□□□ -1.28
VIM-207ENST00000495528 CHMP2AO43633 222 aa7.05□□□□□ -1.28
VIM-207ENST00000495528 DDHD2O94830 711 aa7.05□□□□□ -1.28
VIM-207ENST00000495528 CTDNEP1O95476 244 aa7.05□□□□□ -1.28
VIM-207ENST00000495528 AOC1P19801 751 aa7.05□□□□□ -1.28
VIM-207ENST00000495528 GNA11P29992 359 aa7.05□□□□□ -1.28
VIM-207ENST00000495528 SLC11A1P49279 550 aa7.05□□□□□ -1.28
VIM-207ENST00000495528 POLGP54098 1239 aaPredicted RBP7.05□□□□□ -1.28
VIM-207ENST00000495528 SLC25A3Q00325 362 aa7.05□□□□□ -1.28
VIM-207ENST00000495528 TDGQ13569 410 aa7.05□□□□□ -1.28
VIM-207ENST00000495528 CUL4AQ13619 759 aa7.05□□□□□ -1.28
VIM-207ENST00000495528 GIT2Q14161 759 aa7.05□□□□□ -1.28
VIM-207ENST00000495528 PUM1Q14671 1186 aaKnown RBP eCLIP7.05□□□□□ -1.283e-9■■■□□ 15.2
VIM-207ENST00000495528 PTPN14Q15678 1187 aa7.05□□□□□ -1.28
VIM-207ENST00000495528 ARHGAP29Q52LW3 1261 aa7.05□□□□□ -1.28
VIM-207ENST00000495528 PDCD4Q53EL6 469 aaKnown RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms