RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 UMODL1-AS1Q8N2C9 162 aa17.54■□□□□ 0.4
HDAC6-235ENST00000495515 DCAF4L2Q8NA75 395 aa17.54■□□□□ 0.4
HDAC6-235ENST00000495515 ATRIPQ8WXE1 791 aa17.54■□□□□ 0.4
HDAC6-235ENST00000495515 FAM122AQ96E09 287 aa17.54■□□□□ 0.4
HDAC6-235ENST00000495515 SPON2Q9BUD6 331 aa17.54■□□□□ 0.4
HDAC6-235ENST00000495515 PRDM16Q9HAZ2 1276 aa17.54■□□□□ 0.4
HDAC6-235ENST00000495515 ATP13A1Q9HD20 1204 aa17.54■□□□□ 0.4
HDAC6-235ENST00000495515 SPATA6Q9NWH7 488 aaPredicted RBP17.54■□□□□ 0.4
HDAC6-235ENST00000495515 THAP10Q9P2Z0 257 aaPredicted RBP17.54■□□□□ 0.4
HDAC6-235ENST00000495515 INTS6Q9UL03 887 aaKnown RBP17.54■□□□□ 0.4
HDAC6-235ENST00000495515 HPCAL4Q9UM19 191 aa17.54■□□□□ 0.4
HDAC6-235ENST00000495515 SLC8A2Q9UPR5 921 aa17.54■□□□□ 0.4
HDAC6-235ENST00000495515 MIF4GDA9UHW6 222 aaKnown RBP17.53■□□□□ 0.4
HDAC6-235ENST00000495515 KLF8O95600 359 aaPredicted RBP17.53■□□□□ 0.4
HDAC6-235ENST00000495515 SRPRAP08240 638 aaKnown RBP17.53■□□□□ 0.4
HDAC6-235ENST00000495515 NDST2P52849 883 aa17.53■□□□□ 0.4
HDAC6-235ENST00000495515 ECT2LQ008S8 904 aa17.53■□□□□ 0.4
HDAC6-235ENST00000495515 PARP15Q460N3 678 aa17.53■□□□□ 0.4
HDAC6-235ENST00000495515 EMC10Q5UCC4 262 aa17.53■□□□□ 0.4
HDAC6-235ENST00000495515 IL31Q6EBC2 164 aa17.53■□□□□ 0.4
HDAC6-235ENST00000495515 RETSATQ6NUM9 610 aa17.53■□□□□ 0.4
HDAC6-235ENST00000495515 KATNAL2Q8IYT4 538 aa17.53■□□□□ 0.4
HDAC6-235ENST00000495515 ALLCQ8N6M5 410 aa17.53■□□□□ 0.4
HDAC6-235ENST00000495515 UBL4BQ8N7F7 174 aa17.53■□□□□ 0.4
HDAC6-235ENST00000495515 IL17RCQ8NAC3 791 aa17.53■□□□□ 0.4
HDAC6-235ENST00000495515 KDM1BQ8NB78 822 aa17.53■□□□□ 0.4
HDAC6-235ENST00000495515 DTWD2Q8NBA8 298 aa17.53■□□□□ 0.4
HDAC6-235ENST00000495515 TSC1Q92574 1164 aa17.53■□□□□ 0.4
HDAC6-235ENST00000495515 MAK16Q9BXY0 300 aaKnown RBP17.53■□□□□ 0.4
HDAC6-235ENST00000495515 KLHL11Q9NVR0 708 aa17.53■□□□□ 0.4
HDAC6-235ENST00000495515 SLC25A13Q9UJS0 675 aa17.53■□□□□ 0.4
HDAC6-235ENST00000495515 OR51B4Q9Y5P0 310 aa17.53■□□□□ 0.4
HDAC6-235ENST00000495515 A0A0D9SEW6 157 aa17.52■□□□□ 0.4
HDAC6-235ENST00000495515 ZRANB2O95218 330 aaKnown RBP eCLIP17.52■□□□□ 0.4
HDAC6-235ENST00000495515 AMPD1P23109 780 aa17.52■□□□□ 0.4
HDAC6-235ENST00000495515 CTNNA2P26232 953 aa17.52■□□□□ 0.4
HDAC6-235ENST00000495515 CTNNA1P35221 906 aaKnown RBP17.52■□□□□ 0.4
HDAC6-235ENST00000495515 CETN2P41208 172 aa17.52■□□□□ 0.4
HDAC6-235ENST00000495515 CXCL12P48061 93 aa17.52■□□□□ 0.4
HDAC6-235ENST00000495515 MTAPQ13126 283 aa17.52■□□□□ 0.4
HDAC6-235ENST00000495515 FNDC3BQ53EP0 1204 aaKnown RBP17.52■□□□□ 0.4
HDAC6-235ENST00000495515 ANKRD20A8PQ5CZ79 823 aa17.52■□□□□ 0.4
HDAC6-235ENST00000495515 SERPINA13PQ6UXR4 307 aa17.52■□□□□ 0.4
HDAC6-235ENST00000495515 SYT13Q7L8C5 426 aa17.52■□□□□ 0.4
HDAC6-235ENST00000495515 NT5DC3Q86UY8 548 aa17.52■□□□□ 0.4
HDAC6-235ENST00000495515 ZNF354CQ86Y25 554 aa17.52■□□□□ 0.4
HDAC6-235ENST00000495515 RCOR2Q8IZ40 523 aa17.52■□□□□ 0.4
HDAC6-235ENST00000495515 CCDC33Q8N5R6 958 aa17.52■□□□□ 0.4
HDAC6-235ENST00000495515 TXNDC5Q8NBS9 432 aaKnown RBP17.52■□□□□ 0.4
HDAC6-235ENST00000495515 OR7D4Q8NG98 312 aa17.52■□□□□ 0.4
HDAC6-235ENST00000495515 OR52K2Q8NGK3 314 aa17.52■□□□□ 0.4
HDAC6-235ENST00000495515 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.52■□□□□ 0.4
HDAC6-235ENST00000495515 CYB5D2Q8WUJ1 264 aa17.52■□□□□ 0.4
HDAC6-235ENST00000495515 SORCS1Q8WY21 1168 aa17.52■□□□□ 0.4
HDAC6-235ENST00000495515 RAPGEF5Q92565 580 aa17.52■□□□□ 0.4
HDAC6-235ENST00000495515 ARHGEF2Q92974 986 aaKnown RBP17.52■□□□□ 0.4
HDAC6-235ENST00000495515 ALG14Q96F25 216 aa17.52■□□□□ 0.4
HDAC6-235ENST00000495515 RBM41Q96IZ5 413 aaKnown RBP17.52■□□□□ 0.4
HDAC6-235ENST00000495515 NDFIP2Q9NV92 336 aa17.52■□□□□ 0.4
HDAC6-235ENST00000495515 MMP17Q9ULZ9 603 aa17.52■□□□□ 0.4
HDAC6-235ENST00000495515 ERVW-1Q9UQF0 538 aa17.52■□□□□ 0.4
HDAC6-235ENST00000495515 ARIH1Q9Y4X5 557 aaPredicted RBP17.52■□□□□ 0.4
HDAC6-235ENST00000495515 PCDHA3Q9Y5H8 950 aa17.52■□□□□ 0.4
HDAC6-235ENST00000495515 CAPN6Q9Y6Q1 641 aa17.52■□□□□ 0.4
HDAC6-235ENST00000495515 KIAA1549LQ6ZVL6 1849 aa17.51■□□□□ 0.39
HDAC6-235ENST00000495515 ZNF318Q5VUA4 2279 aa17.51■□□□□ 0.39
HDAC6-235ENST00000495515 CXorf51AA0A1B0GTR3 108 aa17.51■□□□□ 0.39
HDAC6-235ENST00000495515 GOLGA6L9A6NEM1 432 aa17.51■□□□□ 0.39
HDAC6-235ENST00000495515 ZSCAN5CA6NGD5 496 aaPredicted RBP17.51■□□□□ 0.39
HDAC6-235ENST00000495515 ARHGAP42A6NI28 874 aa17.51■□□□□ 0.39
HDAC6-235ENST00000495515 RASA4BC9J798 803 aa17.51■□□□□ 0.39
HDAC6-235ENST00000495515 CBX4O00257 560 aa17.51■□□□□ 0.39
HDAC6-235ENST00000495515 ZBTB24O43167 697 aaPredicted RBP17.51■□□□□ 0.39
HDAC6-235ENST00000495515 RASA4O43374 803 aa17.51■□□□□ 0.39
HDAC6-235ENST00000495515 LAMTOR5O43504 91 aa17.51■□□□□ 0.39
HDAC6-235ENST00000495515 CD48P09326 243 aa17.51■□□□□ 0.39
HDAC6-235ENST00000495515 IL4RP24394 825 aa17.51■□□□□ 0.39
HDAC6-235ENST00000495515 VASPP50552 380 aaPredicted RBP17.51■□□□□ 0.39
HDAC6-235ENST00000495515 RWDD2BP57060 319 aa17.51■□□□□ 0.39
HDAC6-235ENST00000495515 GEMIN4P57678 1058 aaKnown RBP17.51■□□□□ 0.39
HDAC6-235ENST00000495515 SLC20A2Q08357 652 aa17.51■□□□□ 0.39
HDAC6-235ENST00000495515 GAS6Q14393 721 aa17.51■□□□□ 0.39
HDAC6-235ENST00000495515 ZNF234Q14588 700 aa17.51■□□□□ 0.39
HDAC6-235ENST00000495515 STARD3Q14849 445 aa17.51■□□□□ 0.39
HDAC6-235ENST00000495515 C1orf210Q8IVY1 113 aa17.51■□□□□ 0.39
HDAC6-235ENST00000495515 TRIM58Q8NG06 486 aa17.51■□□□□ 0.39
HDAC6-235ENST00000495515 EXD1Q8NHP7 514 aa17.51■□□□□ 0.39
HDAC6-235ENST00000495515 RNF25Q96BH1 459 aaPredicted RBP17.51■□□□□ 0.39
HDAC6-235ENST00000495515 FAF2Q96CS3 445 aa17.51■□□□□ 0.39
HDAC6-235ENST00000495515 ACE2Q9BYF1 805 aaPredicted RBP17.51■□□□□ 0.39
HDAC6-235ENST00000495515 CACNA2D2Q9NY47 1150 aa17.51■□□□□ 0.39
HDAC6-235ENST00000495515 SUN2Q9UH99 717 aa17.51■□□□□ 0.39
HDAC6-235ENST00000495515 STON1Q9Y6Q2 735 aa17.51■□□□□ 0.39
HDAC6-235ENST00000495515 DCLK1O15075 740 aa17.5■□□□□ 0.39
HDAC6-235ENST00000495515 SYNCRIPO60506 623 aaKnown RBP17.5■□□□□ 0.39
HDAC6-235ENST00000495515 FTCDO95954 541 aa17.5■□□□□ 0.39
HDAC6-235ENST00000495515 HOXB2P14652 356 aa17.5■□□□□ 0.39
HDAC6-235ENST00000495515 ZFXP17010 805 aaPredicted RBP17.5■□□□□ 0.39
HDAC6-235ENST00000495515 MSNP26038 577 aaKnown RBP17.5■□□□□ 0.39
HDAC6-235ENST00000495515 DGKEP52429 567 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms