RNA–Protein interactions for RNA: ENST00000495394.1

RPSA-209, Transcript of ribosomal protein SA, humanhuman

TSL 1 (best)

Gene RPSA, Length 2,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-209ENST00000495394 TMEM40Q8WWA1 233 aa9.54□□□□□ -0.88
RPSA-209ENST00000495394 SEC14L1Q92503 715 aa9.54□□□□□ -0.88
RPSA-209ENST00000495394 EME1Q96AY2 570 aa9.54□□□□□ -0.88
RPSA-209ENST00000495394 SPACA9Q96E40 222 aaPredicted RBP9.54□□□□□ -0.88
RPSA-209ENST00000495394 IMPG2Q9BZV3 1241 aa9.54□□□□□ -0.88
RPSA-209ENST00000495394 MARCH7Q9H992 704 aa9.54□□□□□ -0.88
RPSA-209ENST00000495394 SYTL2Q9HCH5 934 aa9.54□□□□□ -0.88
RPSA-209ENST00000495394 TREM1Q9NP99 234 aa9.54□□□□□ -0.88
RPSA-209ENST00000495394 SYBUQ9NX95 663 aa9.54□□□□□ -0.88
RPSA-209ENST00000495394 DLGAP4Q9Y2H0 992 aa9.54□□□□□ -0.88
RPSA-209ENST00000495394 PCDHGA9Q9Y5G4 932 aaKnown RBP9.54□□□□□ -0.88
RPSA-209ENST00000495394 USH1CQ9Y6N9 552 aa9.54□□□□□ -0.88
RPSA-209ENST00000495394 SERTM2A0A1B0GWG4 89 aa9.54□□□□□ -0.88
RPSA-209ENST00000495394 OR5K3A6NET4 321 aa9.54□□□□□ -0.88
RPSA-209ENST00000495394 ZNF98A6NK75 572 aa9.54□□□□□ -0.88
RPSA-209ENST00000495394 H7BY64 318 aa9.54□□□□□ -0.88
RPSA-209ENST00000495394 DVL2O14641 736 aa9.54□□□□□ -0.88
RPSA-209ENST00000495394 EIF3HO15372 352 aaKnown RBP eCLIP9.54□□□□□ -0.88
RPSA-209ENST00000495394 CA12O43570 354 aa9.54□□□□□ -0.88
RPSA-209ENST00000495394 SYNCRIPO60506 623 aaKnown RBP9.54□□□□□ -0.88
RPSA-209ENST00000495394 ALX3O95076 343 aa9.54□□□□□ -0.88
RPSA-209ENST00000495394 ADH1CP00326 375 aa9.54□□□□□ -0.88
RPSA-209ENST00000495394 TFRCP02786 760 aaKnown RBP9.54□□□□□ -0.88
RPSA-209ENST00000495394 ODC1P11926 461 aa9.54□□□□□ -0.88
RPSA-209ENST00000495394 TCN1P20061 433 aaPredicted RBP9.54□□□□□ -0.88
RPSA-209ENST00000495394 TCEA1P23193 301 aaKnown RBP9.54□□□□□ -0.88
RPSA-209ENST00000495394 EEF1DP29692 281 aaKnown RBP9.54□□□□□ -0.88
RPSA-209ENST00000495394 RRM2P31350 389 aa9.54□□□□□ -0.88
RPSA-209ENST00000495394 ERFP50548 548 aa9.54□□□□□ -0.88
RPSA-209ENST00000495394 GNG2P59768 71 aa9.54□□□□□ -0.88
RPSA-209ENST00000495394 RAC3P60763 192 aa9.54□□□□□ -0.88
RPSA-209ENST00000495394 FCHO2Q0JRZ9 810 aa9.54□□□□□ -0.88
RPSA-209ENST00000495394 STK4Q13043 487 aa9.54□□□□□ -0.88
RPSA-209ENST00000495394 CHIT1Q13231 466 aa9.54□□□□□ -0.88
RPSA-209ENST00000495394 PKP1Q13835 747 aa9.54□□□□□ -0.88
RPSA-209ENST00000495394 HERC4Q5GLZ8 1057 aaPredicted RBP9.54□□□□□ -0.88
RPSA-209ENST00000495394 PLEKHA7Q6IQ23 1121 aa9.54□□□□□ -0.88
RPSA-209ENST00000495394 MIER3Q7Z3K6 550 aa9.54□□□□□ -0.88
RPSA-209ENST00000495394 AACSQ86V21 672 aa9.54□□□□□ -0.88
RPSA-209ENST00000495394 CYP4X1Q8N118 509 aa9.54□□□□□ -0.88
RPSA-209ENST00000495394 ZNF366Q8N895 744 aa9.54□□□□□ -0.88
RPSA-209ENST00000495394 MRPS27Q92552 414 aaKnown RBP9.54□□□□□ -0.88
RPSA-209ENST00000495394 P3H4Q92791 437 aa9.54□□□□□ -0.88
RPSA-209ENST00000495394 FAM122AQ96E09 287 aa9.54□□□□□ -0.88
RPSA-209ENST00000495394 MASTLQ96GX5 879 aa9.54□□□□□ -0.88
RPSA-209ENST00000495394 TOX2Q96NM4 488 aa9.54□□□□□ -0.88
RPSA-209ENST00000495394 GBP5Q96PP8 586 aa9.54□□□□□ -0.88
RPSA-209ENST00000495394 FAM193BQ96PV7 902 aaPredicted RBP9.54□□□□□ -0.88
RPSA-209ENST00000495394 POLR1EQ9GZS1 481 aaKnown RBP9.54□□□□□ -0.88
RPSA-209ENST00000495394 SLC26A1Q9H2B4 701 aa9.54□□□□□ -0.88
RPSA-209ENST00000495394 ETNK2Q9NVF9 386 aa9.54□□□□□ -0.88
RPSA-209ENST00000495394 ARHGAP26Q9UNA1 814 aa9.54□□□□□ -0.88
RPSA-209ENST00000495394 ZDHHC9Q9Y397 364 aa9.54□□□□□ -0.88
RPSA-209ENST00000495394 GRIN2DO15399 1336 aa9.53□□□□□ -0.88
RPSA-209ENST00000495394 MAN1A2O60476 641 aa9.53□□□□□ -0.88
RPSA-209ENST00000495394 DPEP1P16444 411 aa9.53□□□□□ -0.88
RPSA-209ENST00000495394 PDE6AP16499 860 aa9.53□□□□□ -0.88
RPSA-209ENST00000495394 LPOP22079 712 aaPredicted RBP9.53□□□□□ -0.88
RPSA-209ENST00000495394 TYK2P29597 1187 aa9.53□□□□□ -0.88
RPSA-209ENST00000495394 CHRNA5P30532 468 aa9.53□□□□□ -0.88
RPSA-209ENST00000495394 SLC5A2P31639 672 aa9.53□□□□□ -0.88
RPSA-209ENST00000495394 PRRX1P54821 245 aa9.53□□□□□ -0.88
RPSA-209ENST00000495394 NR1H2P55055 460 aa9.53□□□□□ -0.88
RPSA-209ENST00000495394 CTSWP56202 376 aa9.53□□□□□ -0.88
RPSA-209ENST00000495394 STX17P56962 302 aa9.53□□□□□ -0.88
RPSA-209ENST00000495394 HNRNPKP61978 463 aaKnown RBP eCLIP9.53□□□□□ -0.88
RPSA-209ENST00000495394 ARF5P84085 180 aa9.53□□□□□ -0.88
RPSA-209ENST00000495394 KIF23Q02241 960 aaPredicted RBP9.53□□□□□ -0.88
RPSA-209ENST00000495394 CHRNA6Q15825 494 aa9.53□□□□□ -0.88
RPSA-209ENST00000495394 RTN1Q16799 776 aa9.53□□□□□ -0.88
RPSA-209ENST00000495394 STYK1Q6J9G0 422 aa9.53□□□□□ -0.88
RPSA-209ENST00000495394 RINT1Q6NUQ1 792 aa9.53□□□□□ -0.88
RPSA-209ENST00000495394 DCLRE1AQ6PJP8 1040 aa9.53□□□□□ -0.88
RPSA-209ENST00000495394 RUFY4Q6ZNE9 571 aa9.53□□□□□ -0.88
RPSA-209ENST00000495394 CACNA2D4Q7Z3S7 1137 aa9.53□□□□□ -0.88
RPSA-209ENST00000495394 PEX26Q7Z412 305 aa9.53□□□□□ -0.88
RPSA-209ENST00000495394 CYP2U1Q7Z449 544 aa9.53□□□□□ -0.88
RPSA-209ENST00000495394 VSIG10LQ86VR7 867 aa9.53□□□□□ -0.88
RPSA-209ENST00000495394 SYNPOQ8N3V7 929 aa9.53□□□□□ -0.88
RPSA-209ENST00000495394 GSTCDQ8NEC7 633 aa9.53□□□□□ -0.88
RPSA-209ENST00000495394 COG1Q8WTW3 980 aa9.53□□□□□ -0.88
RPSA-209ENST00000495394 EAF2Q96CJ1 260 aaPredicted RBP9.53□□□□□ -0.88
RPSA-209ENST00000495394 MAGED4Q96JG8 741 aa9.53□□□□□ -0.88
RPSA-209ENST00000495394 NSMCE2Q96MF7 247 aa9.53□□□□□ -0.88
RPSA-209ENST00000495394 PANX2Q96RD6 677 aa9.53□□□□□ -0.88
RPSA-209ENST00000495394 CYTH2Q99418 400 aa9.53□□□□□ -0.88
RPSA-209ENST00000495394 BCL2L14Q9BZR8 327 aa9.53□□□□□ -0.88
RPSA-209ENST00000495394 NAT10Q9H0A0 1025 aaKnown RBP9.53□□□□□ -0.88
RPSA-209ENST00000495394 COPRSQ9NQ92 184 aa9.53□□□□□ -0.88
RPSA-209ENST00000495394 ZNF275Q9NSD4 429 aaPredicted RBP9.53□□□□□ -0.88
RPSA-209ENST00000495394 FAM105AQ9NUU6 356 aa9.53□□□□□ -0.88
RPSA-209ENST00000495394 TOR4AQ9NXH8 423 aa9.53□□□□□ -0.88
RPSA-209ENST00000495394 LIMA1Q9UHB6 759 aaKnown RBP9.53□□□□□ -0.88
RPSA-209ENST00000495394 IPO11Q9UI26 975 aaKnown RBP9.53□□□□□ -0.88
RPSA-209ENST00000495394 SCOCQ9UIL1 159 aa9.53□□□□□ -0.88
RPSA-209ENST00000495394 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.53□□□□□ -0.88
RPSA-209ENST00000495394 VPS4AQ9UN37 437 aa9.53□□□□□ -0.88
RPSA-209ENST00000495394 DIMT1Q9UNQ2 313 aaKnown RBP9.53□□□□□ -0.88
RPSA-209ENST00000495394 GPSM3Q9Y4H4 160 aa9.53□□□□□ -0.88
RPSA-209ENST00000495394 LRRC42Q9Y546 428 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms