RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 TLK1Q9UKI8 766 aa9.22□□□□□ -0.93
GARNL3-219ENST00000495172 DNM3Q9UQ16 869 aa9.22□□□□□ -0.93
GARNL3-219ENST00000495172 KCNMB2Q9Y691 235 aa9.22□□□□□ -0.93
GARNL3-219ENST00000495172 ARHGEF17Q96PE2 2063 aaPredicted RBP9.21□□□□□ -0.93
GARNL3-219ENST00000495172 VPS13CQ709C8 3753 aa9.21□□□□□ -0.94
GARNL3-219ENST00000495172 A0A1W2PQU0 124 aa9.21□□□□□ -0.94
GARNL3-219ENST00000495172 POM121BA6NF01 834 aa9.21□□□□□ -0.94
GARNL3-219ENST00000495172 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.21□□□□□ -0.94
GARNL3-219ENST00000495172 SPINT1O43278 529 aa9.21□□□□□ -0.94
GARNL3-219ENST00000495172 PLRG1O43660 514 aaKnown RBP9.21□□□□□ -0.94
GARNL3-219ENST00000495172 AP1G2O75843 785 aa9.21□□□□□ -0.94
GARNL3-219ENST00000495172 SORBS2O94875 1100 aaKnown RBP9.21□□□□□ -0.94
GARNL3-219ENST00000495172 CCDC130P13994 396 aa9.21□□□□□ -0.94
GARNL3-219ENST00000495172 POLR2EP19388 210 aaKnown RBP9.21□□□□□ -0.94
GARNL3-219ENST00000495172 GUCY2CP25092 1073 aa9.21□□□□□ -0.94
GARNL3-219ENST00000495172 ITGB7P26010 798 aa9.21□□□□□ -0.94
GARNL3-219ENST00000495172 MZF1P28698 734 aaPredicted RBP9.21□□□□□ -0.94
GARNL3-219ENST00000495172 CCKBRP32239 447 aa9.21□□□□□ -0.94
GARNL3-219ENST00000495172 NOS2P35228 1153 aa9.21□□□□□ -0.94
GARNL3-219ENST00000495172 CHKAP35790 457 aa9.21□□□□□ -0.94
GARNL3-219ENST00000495172 STK19P49842 368 aaPredicted RBP9.21□□□□□ -0.94
GARNL3-219ENST00000495172 MAP3K7CLP57077 242 aa9.21□□□□□ -0.94
GARNL3-219ENST00000495172 HNRNPKP61978 463 aaKnown RBP eCLIP9.21□□□□□ -0.94
GARNL3-219ENST00000495172 RBP5P82980 135 aa9.21□□□□□ -0.94
GARNL3-219ENST00000495172 CNTN1Q12860 1018 aa9.21□□□□□ -0.94
GARNL3-219ENST00000495172 SEPT6Q14141 434 aa9.21□□□□□ -0.94
GARNL3-219ENST00000495172 SETMARQ53H47 684 aaPredicted RBP9.21□□□□□ -0.94
GARNL3-219ENST00000495172 ARSHQ5FYA8 562 aa9.21□□□□□ -0.94
GARNL3-219ENST00000495172 AGBL4Q5VU57 503 aa9.21□□□□□ -0.94
GARNL3-219ENST00000495172 BLOC1S2Q6QNY1 142 aa9.21□□□□□ -0.94
GARNL3-219ENST00000495172 NYAP1Q6ZVC0 841 aa9.21□□□□□ -0.94
GARNL3-219ENST00000495172 KIAA0907Q7Z7F0 614 aaPredicted RBP9.21□□□□□ -0.94
GARNL3-219ENST00000495172 SCD5Q86SK9 330 aa9.21□□□□□ -0.94
GARNL3-219ENST00000495172 B3GALNT2Q8NCR0 500 aa9.21□□□□□ -0.94
GARNL3-219ENST00000495172 BMFQ96LC9 184 aa9.21□□□□□ -0.94
GARNL3-219ENST00000495172 RANBP9Q96S59 729 aa9.21□□□□□ -0.94
GARNL3-219ENST00000495172 SLC2A11Q9BYW1 496 aa9.21□□□□□ -0.94
GARNL3-219ENST00000495172 SNX25Q9H3E2 840 aa9.21□□□□□ -0.94
GARNL3-219ENST00000495172 SALL4Q9UJQ4 1053 aa9.21□□□□□ -0.94
GARNL3-219ENST00000495172 INTS6Q9UL03 887 aaKnown RBP9.21□□□□□ -0.94
GARNL3-219ENST00000495172 DMTF1Q9Y222 760 aa9.21□□□□□ -0.94
GARNL3-219ENST00000495172 B3GALT1Q9Y5Z6 326 aa9.21□□□□□ -0.94
GARNL3-219ENST00000495172 RNF215Q9Y6U7 377 aa9.21□□□□□ -0.94
GARNL3-219ENST00000495172 RNF103O00237 685 aa9.2□□□□□ -0.94
GARNL3-219ENST00000495172 RAD51BO15315 384 aa9.2□□□□□ -0.94
GARNL3-219ENST00000495172 RAD1O60671 282 aa9.2□□□□□ -0.94
GARNL3-219ENST00000495172 CSF2P04141 144 aa9.2□□□□□ -0.94
GARNL3-219ENST00000495172 NME1P15531 152 aaKnown RBP9.2□□□□□ -0.94
GARNL3-219ENST00000495172 JUNDP17535 347 aa9.2□□□□□ -0.94
GARNL3-219ENST00000495172 C5AR1P21730 350 aa9.2□□□□□ -0.94
GARNL3-219ENST00000495172 CSKP41240 450 aa9.2□□□□□ -0.94
GARNL3-219ENST00000495172 ZFP36L1Q07352 338 aaKnown RBP9.2□□□□□ -0.94
GARNL3-219ENST00000495172 ZNF284Q2VY69 593 aa9.2□□□□□ -0.94
GARNL3-219ENST00000495172 SEL1L3Q68CR1 1132 aa9.2□□□□□ -0.94
GARNL3-219ENST00000495172 HAUS3Q68CZ6 603 aa9.2□□□□□ -0.94
GARNL3-219ENST00000495172 TRIM69Q86WT6 500 aa9.2□□□□□ -0.94
GARNL3-219ENST00000495172 AHI1Q8N157 1196 aa9.2□□□□□ -0.94
GARNL3-219ENST00000495172 Q8NA96 180 aa9.2□□□□□ -0.94
GARNL3-219ENST00000495172 WFIKKN2Q8TEU8 576 aa9.2□□□□□ -0.94
GARNL3-219ENST00000495172 MYEOVQ96EZ4 313 aa9.2□□□□□ -0.94
GARNL3-219ENST00000495172 SLC45A3Q96JT2 553 aa9.2□□□□□ -0.94
GARNL3-219ENST00000495172 RPL10LQ96L21 214 aaKnown RBP9.2□□□□□ -0.94
GARNL3-219ENST00000495172 MMTAG2Q9BU76 263 aaKnown RBP9.2□□□□□ -0.94
GARNL3-219ENST00000495172 CLPBQ9H078 707 aa9.2□□□□□ -0.94
GARNL3-219ENST00000495172 LRRN3Q9H3W5 708 aa9.2□□□□□ -0.94
GARNL3-219ENST00000495172 GPN2Q9H9Y4 310 aaPredicted RBP9.2□□□□□ -0.94
GARNL3-219ENST00000495172 DMAP1Q9NPF5 467 aaPredicted RBP9.2□□□□□ -0.94
GARNL3-219ENST00000495172 ITGA11Q9UKX5 1188 aa9.2□□□□□ -0.94
GARNL3-219ENST00000495172 GOLGA6L7A0A1B0GV03 622 aa9.19□□□□□ -0.94
GARNL3-219ENST00000495172 A8MXQ7 604 aa9.19□□□□□ -0.94
GARNL3-219ENST00000495172 MKRN2OSH3BPM6 223 aa9.19□□□□□ -0.94
GARNL3-219ENST00000495172 YY2O15391 372 aa9.19□□□□□ -0.94
GARNL3-219ENST00000495172 ZG16O60844 167 aa9.19□□□□□ -0.94
GARNL3-219ENST00000495172 IL18RAPO95256 599 aa9.19□□□□□ -0.94
GARNL3-219ENST00000495172 CTDNEP1O95476 244 aa9.19□□□□□ -0.94
GARNL3-219ENST00000495172 ATP5BP06576 529 aaKnown RBP9.19□□□□□ -0.94
GARNL3-219ENST00000495172 HMGB1P09429 215 aaKnown RBP9.19□□□□□ -0.94
GARNL3-219ENST00000495172 FGF3P11487 239 aaPredicted RBP9.19□□□□□ -0.94
GARNL3-219ENST00000495172 EVCP57679 992 aa9.19□□□□□ -0.94
GARNL3-219ENST00000495172 KCNA1Q09470 495 aa9.19□□□□□ -0.94
GARNL3-219ENST00000495172 EIF2B5Q13144 721 aaKnown RBP9.19□□□□□ -0.94
GARNL3-219ENST00000495172 IL17AQ16552 155 aa9.19□□□□□ -0.94
GARNL3-219ENST00000495172 PRRT3Q5FWE3 981 aa9.19□□□□□ -0.94
GARNL3-219ENST00000495172 RFWD3Q6PCD5 774 aa9.19□□□□□ -0.94
GARNL3-219ENST00000495172 LINGO4Q6UY18 593 aa9.19□□□□□ -0.94
GARNL3-219ENST00000495172 ZNF517Q6ZMY9 492 aaPredicted RBP9.19□□□□□ -0.94
GARNL3-219ENST00000495172 Q71RC1 249 aaPredicted RBP9.19□□□□□ -0.94
GARNL3-219ENST00000495172 FUKQ8N0W3 1084 aa9.19□□□□□ -0.94
GARNL3-219ENST00000495172 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.19□□□□□ -0.94
GARNL3-219ENST00000495172 POMGNT1Q8WZA1 660 aa9.19□□□□□ -0.94
GARNL3-219ENST00000495172 STARD8Q92502 1023 aa9.19□□□□□ -0.94
GARNL3-219ENST00000495172 NAT6Q93015 286 aa9.19□□□□□ -0.94
GARNL3-219ENST00000495172 TMEM74Q96NL1 305 aa9.19□□□□□ -0.94
GARNL3-219ENST00000495172 FIZ1Q96SL8 496 aa9.19□□□□□ -0.94
GARNL3-219ENST00000495172 TRIM55Q9BYV6 548 aa9.19□□□□□ -0.94
GARNL3-219ENST00000495172 RDH14Q9HBH5 336 aa9.19□□□□□ -0.94
GARNL3-219ENST00000495172 STIM2Q9P246 746 aa9.19□□□□□ -0.94
GARNL3-219ENST00000495172 NAGPAQ9UK23 515 aa9.19□□□□□ -0.94
GARNL3-219ENST00000495172 ZFR2Q9UPR6 939 aaKnown RBP9.19□□□□□ -0.94
GARNL3-219ENST00000495172 PRICKLE3O43900 615 aaPredicted RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms