RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 MTG2Q9H4K7 406 aa16.35■□□□□ 0.21
LIME1-209ENST00000494776 RETREG1Q9H6L5 497 aa16.35■□□□□ 0.21
LIME1-209ENST00000494776 NHEJ1Q9H9Q4 299 aaPredicted RBP16.35■□□□□ 0.21
LIME1-209ENST00000494776 DNAI1Q9UI46 699 aa16.35■□□□□ 0.21
LIME1-209ENST00000494776 USP18Q9UMW8 372 aa16.35■□□□□ 0.21
LIME1-209ENST00000494776 MYO15AQ9UKN7 3530 aa16.35■□□□□ 0.21
LIME1-209ENST00000494776 VPS13AQ96RL7 3174 aa16.35■□□□□ 0.21
LIME1-209ENST00000494776 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.34■□□□□ 0.21
LIME1-209ENST00000494776 A0A0D9SEW6 157 aa16.34■□□□□ 0.21
LIME1-209ENST00000494776 TARSL2A2RTX5 802 aaKnown RBP16.34■□□□□ 0.21
LIME1-209ENST00000494776 SIN3BO75182 1162 aa16.34■□□□□ 0.21
LIME1-209ENST00000494776 CYP1A2P05177 515 aa16.34■□□□□ 0.21
LIME1-209ENST00000494776 EPHB2P29323 1055 aa16.34■□□□□ 0.21
LIME1-209ENST00000494776 MIPP30301 263 aa16.34■□□□□ 0.21
LIME1-209ENST00000494776 MAPKAPK2P49137 400 aa16.34■□□□□ 0.21
LIME1-209ENST00000494776 ZNF252P-AS1Q0IIN9 211 aa16.34■□□□□ 0.21
LIME1-209ENST00000494776 SPEM2Q0P670 501 aa16.34■□□□□ 0.21
LIME1-209ENST00000494776 TBX2Q13207 712 aaPredicted RBP16.34■□□□□ 0.21
LIME1-209ENST00000494776 PIGHQ14442 188 aaPredicted RBP16.34■□□□□ 0.21
LIME1-209ENST00000494776 ACAP1Q15027 740 aa16.34■□□□□ 0.21
LIME1-209ENST00000494776 ERMARDQ5T6L9 678 aa16.34■□□□□ 0.21
LIME1-209ENST00000494776 MANEALQ5VSG8 457 aa16.34■□□□□ 0.21
LIME1-209ENST00000494776 PMS2CLQ68D20 193 aa16.34■□□□□ 0.21
LIME1-209ENST00000494776 IL31Q6EBC2 164 aa16.34■□□□□ 0.21
LIME1-209ENST00000494776 ZNF354CQ86Y25 554 aa16.34■□□□□ 0.21
LIME1-209ENST00000494776 TMEFF1Q8IYR6 380 aa16.34■□□□□ 0.21
LIME1-209ENST00000494776 GPR161Q8N6U8 529 aaKnown RBP16.34■□□□□ 0.21
LIME1-209ENST00000494776 OR7D4Q8NG98 312 aa16.34■□□□□ 0.21
LIME1-209ENST00000494776 MRFAP1L1Q96HT8 127 aa16.34■□□□□ 0.21
LIME1-209ENST00000494776 ARRDC1-AS1Q9H2J1 176 aa16.34■□□□□ 0.21
LIME1-209ENST00000494776 DHX35Q9H5Z1 703 aaKnown RBP16.34■□□□□ 0.21
LIME1-209ENST00000494776 CATSPERBQ9H7T0 1116 aa16.34■□□□□ 0.21
LIME1-209ENST00000494776 ATP13A1Q9HD20 1204 aa16.34■□□□□ 0.21
LIME1-209ENST00000494776 TMEM248Q9NWD8 314 aa16.34■□□□□ 0.21
LIME1-209ENST00000494776 GPATCH2LQ9NWQ4 482 aa16.34■□□□□ 0.21
LIME1-209ENST00000494776 CTTNBP2NLQ9P2B4 639 aa16.34■□□□□ 0.21
LIME1-209ENST00000494776 IP6K2Q9UHH9 426 aa16.34■□□□□ 0.21
LIME1-209ENST00000494776 MBD1Q9UIS9 605 aaPredicted RBP16.34■□□□□ 0.21
LIME1-209ENST00000494776 ANAPC7Q9UJX3 599 aa16.34■□□□□ 0.21
LIME1-209ENST00000494776 AP4E1Q9UPM8 1137 aa16.34■□□□□ 0.21
LIME1-209ENST00000494776 OR51B4Q9Y5P0 310 aa16.34■□□□□ 0.21
LIME1-209ENST00000494776 IGHV1OR15-9A0A0B4J2B8 117 aa16.33■□□□□ 0.2
LIME1-209ENST00000494776 MYO1FO00160 1098 aa16.33■□□□□ 0.2
LIME1-209ENST00000494776 CBX4O00257 560 aa16.33■□□□□ 0.2
LIME1-209ENST00000494776 SNAP91O60641 907 aa16.33■□□□□ 0.2
LIME1-209ENST00000494776 DNTTP04053 509 aa16.33■□□□□ 0.2
LIME1-209ENST00000494776 H2AFZP0C0S5 128 aa16.33■□□□□ 0.2
LIME1-209ENST00000494776 OXTRP30559 389 aa16.33■□□□□ 0.2
LIME1-209ENST00000494776 ETFBP38117 255 aa16.33■□□□□ 0.2
LIME1-209ENST00000494776 TPMTP51580 245 aa16.33■□□□□ 0.2
LIME1-209ENST00000494776 TPI1P60174 286 aa16.33■□□□□ 0.2
LIME1-209ENST00000494776 CREB5Q02930 508 aa16.33■□□□□ 0.2
LIME1-209ENST00000494776 GNA12Q03113 381 aa16.33■□□□□ 0.2
LIME1-209ENST00000494776 ZNF776Q68DI1 518 aaPredicted RBP16.33■□□□□ 0.2
LIME1-209ENST00000494776 H2AFVQ71UI9 128 aa16.33■□□□□ 0.2
LIME1-209ENST00000494776 METTL3Q86U44 580 aaKnown RBP16.33■□□□□ 0.2
LIME1-209ENST00000494776 KIAA2013Q8IYS2 634 aa16.33■□□□□ 0.2
LIME1-209ENST00000494776 DEFB119Q8N690 84 aa16.33■□□□□ 0.2
LIME1-209ENST00000494776 DCAF4L2Q8NA75 395 aa16.33■□□□□ 0.2
LIME1-209ENST00000494776 ATP11CQ8NB49 1132 aa16.33■□□□□ 0.2
LIME1-209ENST00000494776 GANCQ8TET4 914 aa16.33■□□□□ 0.2
LIME1-209ENST00000494776 ARHGEF26Q96DR7 871 aa16.33■□□□□ 0.2
LIME1-209ENST00000494776 BTBD6Q96KE9 485 aa16.33■□□□□ 0.2
LIME1-209ENST00000494776 PSMB7Q99436 277 aa16.33■□□□□ 0.2
LIME1-209ENST00000494776 ITM2CQ9NQX7 267 aa16.33■□□□□ 0.2
LIME1-209ENST00000494776 SPTLC3Q9NUV7 552 aa16.33■□□□□ 0.2
LIME1-209ENST00000494776 VPS51Q9UID3 782 aa16.33■□□□□ 0.2
LIME1-209ENST00000494776 HPCAL4Q9UM19 191 aa16.33■□□□□ 0.2
LIME1-209ENST00000494776 EML5Q05BV3 1969 aa16.33■□□□□ 0.2
LIME1-209ENST00000494776 EEF2KO00418 725 aaKnown RBP16.32■□□□□ 0.2
LIME1-209ENST00000494776 DAPK3O43293 454 aa16.32■□□□□ 0.2
LIME1-209ENST00000494776 BNIP3LO60238 219 aa16.32■□□□□ 0.2
LIME1-209ENST00000494776 RAMP2O60895 175 aa16.32■□□□□ 0.2
LIME1-209ENST00000494776 LRCH4O75427 683 aa16.32■□□□□ 0.2
LIME1-209ENST00000494776 EPN2O95208 641 aa16.32■□□□□ 0.2
LIME1-209ENST00000494776 CD6P30203 668 aa16.32■□□□□ 0.2
LIME1-209ENST00000494776 SSR1P43307 286 aaKnown RBP16.32■□□□□ 0.2
LIME1-209ENST00000494776 RPS14P62263 151 aaKnown RBP16.32■□□□□ 0.2
LIME1-209ENST00000494776 SFSWAPQ12872 951 aaKnown RBP16.32■□□□□ 0.2
LIME1-209ENST00000494776 DLG2Q15700 870 aa16.32■□□□□ 0.2
LIME1-209ENST00000494776 ASTE1Q2TB18 679 aaPredicted RBP16.32■□□□□ 0.2
LIME1-209ENST00000494776 TTC31Q49AM3 519 aaPredicted RBP16.32■□□□□ 0.2
LIME1-209ENST00000494776 ARTNQ5T4W7 220 aa16.32■□□□□ 0.2
LIME1-209ENST00000494776 C9orf64Q5T6V5 341 aa16.32■□□□□ 0.2
LIME1-209ENST00000494776 RETSATQ6NUM9 610 aa16.32■□□□□ 0.2
LIME1-209ENST00000494776 ARMCX6Q7L4S7 300 aa16.32■□□□□ 0.2
LIME1-209ENST00000494776 CYP2U1Q7Z449 544 aa16.32■□□□□ 0.2
LIME1-209ENST00000494776 FAM124AQ86V42 546 aa16.32■□□□□ 0.2
LIME1-209ENST00000494776 NLRP14Q86W24 1093 aa16.32■□□□□ 0.2
LIME1-209ENST00000494776 STK40Q8N2I9 435 aa16.32■□□□□ 0.2
LIME1-209ENST00000494776 SH2D3CQ8N5H7 860 aa16.32■□□□□ 0.2
LIME1-209ENST00000494776 ARFGAP1Q8N6T3 406 aa16.32■□□□□ 0.2
LIME1-209ENST00000494776 ZNF564Q8TBZ8 553 aaPredicted RBP16.32■□□□□ 0.2
LIME1-209ENST00000494776 SNRNP25Q9BV90 132 aaKnown RBP16.32■□□□□ 0.2
LIME1-209ENST00000494776 PACSIN1Q9BY11 444 aa16.32■□□□□ 0.2
LIME1-209ENST00000494776 CD93Q9NPY3 652 aa16.32■□□□□ 0.2
LIME1-209ENST00000494776 DONSONQ9NYP3 566 aa16.32■□□□□ 0.2
LIME1-209ENST00000494776 USP36Q9P275 1121 aaKnown RBP16.32■□□□□ 0.2
LIME1-209ENST00000494776 ZNF212Q9UDV6 495 aa16.32■□□□□ 0.2
LIME1-209ENST00000494776 FARP1Q9Y4F1 1045 aaPredicted RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms