RNA–Protein interactions for RNA: ENST00000494613.5

LIMS2-216, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 1,137 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-216ENST00000494613 MPP6Q9NZW5 540 aa16.04■□□□□ 0.16
LIMS2-216ENST00000494613 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.04■□□□□ 0.16
LIMS2-216ENST00000494613 SLCO1B1Q9Y6L6 691 aa16.04■□□□□ 0.16
LIMS2-216ENST00000494613 IGLV3-10A0A075B6K4 115 aa16.03■□□□□ 0.16
LIMS2-216ENST00000494613 A0A1W2PP55 124 aa16.03■□□□□ 0.16
LIMS2-216ENST00000494613 UPK3BL1B0FP48 263 aa16.03■□□□□ 0.16
LIMS2-216ENST00000494613 UPK3BL2E5RIL1 263 aa16.03■□□□□ 0.16
LIMS2-216ENST00000494613 E9PAM4 449 aa16.03■□□□□ 0.16
LIMS2-216ENST00000494613 ATP9BO43861 1147 aa16.03■□□□□ 0.16
LIMS2-216ENST00000494613 FSBPO95073 299 aa16.03■□□□□ 0.16
LIMS2-216ENST00000494613 GJB6O95452 261 aa16.03■□□□□ 0.16
LIMS2-216ENST00000494613 CD59P13987 128 aa16.03■□□□□ 0.16
LIMS2-216ENST00000494613 RDXP35241 583 aaKnown RBP16.03■□□□□ 0.16
LIMS2-216ENST00000494613 CSNK1EP49674 416 aaKnown RBP16.03■□□□□ 0.16
LIMS2-216ENST00000494613 DLG2Q15700 870 aa16.03■□□□□ 0.16
LIMS2-216ENST00000494613 CLEC16AQ2KHT3 1053 aa16.03■□□□□ 0.16
LIMS2-216ENST00000494613 C15orf59Q2T9L4 293 aaPredicted RBP16.03■□□□□ 0.16
LIMS2-216ENST00000494613 IRF2BP2Q7Z5L9 587 aa16.03■□□□□ 0.16
LIMS2-216ENST00000494613 FAM131BQ86XD5 332 aa16.03■□□□□ 0.16
LIMS2-216ENST00000494613 JOSD2Q8TAC2 188 aa16.03■□□□□ 0.16
LIMS2-216ENST00000494613 SNX19Q92543 992 aa16.03■□□□□ 0.16
LIMS2-216ENST00000494613 AGPAT1Q99943 283 aa16.03■□□□□ 0.16
LIMS2-216ENST00000494613 OMDQ99983 421 aa16.03■□□□□ 0.16
LIMS2-216ENST00000494613 C11orf70Q9BRQ4 267 aa16.03■□□□□ 0.16
LIMS2-216ENST00000494613 ZDHHC5Q9C0B5 715 aa16.03■□□□□ 0.16
LIMS2-216ENST00000494613 MUC3BQ9H195 1237 aa16.03■□□□□ 0.16
LIMS2-216ENST00000494613 RTN4Q9NQC3 1192 aaKnown RBP16.03■□□□□ 0.16
LIMS2-216ENST00000494613 ADAM22Q9P0K1 906 aa16.03■□□□□ 0.16
LIMS2-216ENST00000494613 SERGEFQ9UGK8 458 aa16.03■□□□□ 0.16
LIMS2-216ENST00000494613 VPS28Q9UK41 221 aa16.03■□□□□ 0.16
LIMS2-216ENST00000494613 ADAMTS9Q9P2N4 1935 aa16.03■□□□□ 0.16
LIMS2-216ENST00000494613 FAM47DPA6NHR8 397 aa16.02■□□□□ 0.16
LIMS2-216ENST00000494613 C2CD4BA6NLJ0 364 aa16.02■□□□□ 0.16
LIMS2-216ENST00000494613 GJB3O75712 270 aa16.02■□□□□ 0.16
LIMS2-216ENST00000494613 RNASEH2AO75792 299 aaKnown RBP16.02■□□□□ 0.16
LIMS2-216ENST00000494613 MT-CO1P00395 513 aa16.02■□□□□ 0.16
LIMS2-216ENST00000494613 IL1BP01584 269 aa16.02■□□□□ 0.16
LIMS2-216ENST00000494613 KRT3P12035 628 aa16.02■□□□□ 0.16
LIMS2-216ENST00000494613 GOT1P17174 413 aa16.02■□□□□ 0.16
LIMS2-216ENST00000494613 C5AR1P21730 350 aa16.02■□□□□ 0.16
LIMS2-216ENST00000494613 PMLP29590 882 aa16.02■□□□□ 0.16
LIMS2-216ENST00000494613 RFC1P35251 1148 aaPredicted RBP16.02■□□□□ 0.16
LIMS2-216ENST00000494613 ADRA1BP35368 520 aa16.02■□□□□ 0.16
LIMS2-216ENST00000494613 KRT83P78385 493 aa16.02■□□□□ 0.16
LIMS2-216ENST00000494613 BNC1Q01954 994 aa16.02■□□□□ 0.16
LIMS2-216ENST00000494613 GRIK2Q13002 908 aa16.02■□□□□ 0.16
LIMS2-216ENST00000494613 NUMA1Q14980 2115 aa16.02■□□□□ 0.16
LIMS2-216ENST00000494613 WDR59Q6PJI9 974 aa16.02■□□□□ 0.16
LIMS2-216ENST00000494613 LRSAM1Q6UWE0 723 aa16.02■□□□□ 0.16
LIMS2-216ENST00000494613 SETD3Q86TU7 594 aaPredicted RBP16.02■□□□□ 0.16
LIMS2-216ENST00000494613 PHF13Q86YI8 300 aaPredicted RBP16.02■□□□□ 0.16
LIMS2-216ENST00000494613 AADATQ8N5Z0 425 aa16.02■□□□□ 0.16
LIMS2-216ENST00000494613 CENPIQ92674 756 aaPredicted RBP16.02■□□□□ 0.16
LIMS2-216ENST00000494613 CNTNAP3BQ96NU0 1288 aa16.02■□□□□ 0.16
LIMS2-216ENST00000494613 PSMB7Q99436 277 aa16.02■□□□□ 0.16
LIMS2-216ENST00000494613 CNTNAP3Q9BZ76 1288 aa16.02■□□□□ 0.16
LIMS2-216ENST00000494613 MAGEB5Q9BZ81 275 aa16.02■□□□□ 0.16
LIMS2-216ENST00000494613 SLC32A1Q9H598 525 aa16.02■□□□□ 0.16
LIMS2-216ENST00000494613 ADAMTS1Q9UHI8 967 aa16.02■□□□□ 0.16
LIMS2-216ENST00000494613 SLC25A13Q9UJS0 675 aa16.02■□□□□ 0.16
LIMS2-216ENST00000494613 ASCC3Q8N3C0 2202 aaKnown RBP16.02■□□□□ 0.15
LIMS2-216ENST00000494613 MUC22E2RYF6 1773 aaPredicted RBP16.01■□□□□ 0.15
LIMS2-216ENST00000494613 A0A0D9SEW6 157 aa16.01■□□□□ 0.15
LIMS2-216ENST00000494613 A0A1B0GVT2 93 aa16.01■□□□□ 0.15
LIMS2-216ENST00000494613 SIGLEC16A6NMB1 481 aa16.01■□□□□ 0.15
LIMS2-216ENST00000494613 SNAP91O60641 907 aa16.01■□□□□ 0.15
LIMS2-216ENST00000494613 IGHV4-34P06331 123 aa16.01■□□□□ 0.15
LIMS2-216ENST00000494613 RHOCP08134 193 aa16.01■□□□□ 0.15
LIMS2-216ENST00000494613 CD27P26842 260 aa16.01■□□□□ 0.15
LIMS2-216ENST00000494613 OR1E1P30953 314 aa16.01■□□□□ 0.15
LIMS2-216ENST00000494613 SDC4P31431 198 aa16.01■□□□□ 0.15
LIMS2-216ENST00000494613 NSFP46459 744 aaKnown RBP16.01■□□□□ 0.15
LIMS2-216ENST00000494613 PSMD8P48556 350 aa16.01■□□□□ 0.15
LIMS2-216ENST00000494613 ZNF165P49910 485 aa16.01■□□□□ 0.15
LIMS2-216ENST00000494613 SLC14A1Q13336 389 aa16.01■□□□□ 0.15
LIMS2-216ENST00000494613 ELAVL3Q14576 367 aaKnown RBP16.01■□□□□ 0.15
LIMS2-216ENST00000494613 CDO1Q16878 200 aa16.01■□□□□ 0.15
LIMS2-216ENST00000494613 KIAA0895LQ68EN5 471 aa16.01■□□□□ 0.15
LIMS2-216ENST00000494613 NCEH1Q6PIU2 408 aa16.01■□□□□ 0.15
LIMS2-216ENST00000494613 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.01■□□□□ 0.15
LIMS2-216ENST00000494613 TFAP2DQ7Z6R9 452 aa16.01■□□□□ 0.15
LIMS2-216ENST00000494613 SH2D3CQ8N5H7 860 aa16.01■□□□□ 0.15
LIMS2-216ENST00000494613 NAP1L5Q96NT1 182 aaPredicted RBP16.01■□□□□ 0.15
LIMS2-216ENST00000494613 SEPT11Q9NVA2 429 aaKnown RBP16.01■□□□□ 0.15
LIMS2-216ENST00000494613 OR12D3Q9UGF7 316 aa16.01■□□□□ 0.15
LIMS2-216ENST00000494613 SARDHQ9UL12 918 aa16.01■□□□□ 0.15
LIMS2-216ENST00000494613 PCNX2A6NKB5 2137 aa16■□□□□ 0.15
LIMS2-216ENST00000494613 LRRC72A6NJI9 287 aa16■□□□□ 0.15
LIMS2-216ENST00000494613 K7ERQ8 282 aa16■□□□□ 0.15
LIMS2-216ENST00000494613 MCF2LO15068 1137 aa16■□□□□ 0.15
LIMS2-216ENST00000494613 ADH1BP00325 375 aa16■□□□□ 0.15
LIMS2-216ENST00000494613 CALB1P05937 261 aa16■□□□□ 0.15
LIMS2-216ENST00000494613 CCDC172P0C7W6 258 aa16■□□□□ 0.15
LIMS2-216ENST00000494613 FERP16591 822 aa16■□□□□ 0.15
LIMS2-216ENST00000494613 TNFAIP3P21580 790 aa16■□□□□ 0.15
LIMS2-216ENST00000494613 PTPN9P43378 593 aa16■□□□□ 0.15
LIMS2-216ENST00000494613 AFF3P51826 1226 aaKnown RBP16■□□□□ 0.15
LIMS2-216ENST00000494613 IQCB1Q15051 598 aa16■□□□□ 0.15
LIMS2-216ENST00000494613 HLA-BQ31612 363 aa16■□□□□ 0.15
LIMS2-216ENST00000494613 ARL13BQ3SXY8 428 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms