RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 TCF3P15923 654 aa6.95□□□□□ -1.3
MSH5-217ENST00000494458 TACR2P21452 398 aa6.95□□□□□ -1.3
MSH5-217ENST00000494458 PRKCHP24723 683 aa6.95□□□□□ -1.3
MSH5-217ENST00000494458 WEE1P30291 646 aa6.95□□□□□ -1.3
MSH5-217ENST00000494458 SLC6A4P31645 630 aa6.95□□□□□ -1.3
MSH5-217ENST00000494458 ELF1P32519 619 aa6.95□□□□□ -1.3
MSH5-217ENST00000494458 ADRA1AP35348 466 aa6.95□□□□□ -1.3
MSH5-217ENST00000494458 IRAK1P51617 712 aa6.95□□□□□ -1.3
MSH5-217ENST00000494458 SLC18A1P54219 525 aa6.95□□□□□ -1.3
MSH5-217ENST00000494458 CDH4P55283 916 aa6.95□□□□□ -1.3
MSH5-217ENST00000494458 ERVK-21P61565 698 aa6.95□□□□□ -1.3
MSH5-217ENST00000494458 CBX1P83916 185 aa6.95□□□□□ -1.3
MSH5-217ENST00000494458 ZXDBP98169 803 aa6.95□□□□□ -1.3
MSH5-217ENST00000494458 IL10RBQ08334 325 aa6.95□□□□□ -1.3
MSH5-217ENST00000494458 AP1B1Q10567 949 aa6.95□□□□□ -1.3
MSH5-217ENST00000494458 IFRD2Q12894 506 aaPredicted RBP6.95□□□□□ -1.3
MSH5-217ENST00000494458 PDIA2Q13087 525 aaKnown RBP6.95□□□□□ -1.3
MSH5-217ENST00000494458 ZBTB17Q13105 803 aa6.95□□□□□ -1.3
MSH5-217ENST00000494458 MSLNQ13421 630 aaPredicted RBP6.95□□□□□ -1.3
MSH5-217ENST00000494458 SERINC3Q13530 473 aa6.95□□□□□ -1.3
MSH5-217ENST00000494458 KCNC3Q14003 757 aa6.95□□□□□ -1.3
MSH5-217ENST00000494458 VEPH1Q14D04 833 aa6.95□□□□□ -1.3
MSH5-217ENST00000494458 TERF2Q15554 542 aa6.95□□□□□ -1.3
MSH5-217ENST00000494458 SLC14A2Q15849 920 aa6.95□□□□□ -1.3
MSH5-217ENST00000494458 PARP15Q460N3 678 aa6.95□□□□□ -1.3
MSH5-217ENST00000494458 ADGRF1Q5T601 910 aa6.95□□□□□ -1.3
MSH5-217ENST00000494458 TIGD7Q6NT04 549 aaPredicted RBP6.95□□□□□ -1.3
MSH5-217ENST00000494458 LRRC31Q6UY01 552 aa6.95□□□□□ -1.3
MSH5-217ENST00000494458 ZNF783Q6ZMS7 281 aa6.95□□□□□ -1.3
MSH5-217ENST00000494458 KDM7AQ6ZMT4 941 aa6.95□□□□□ -1.3
MSH5-217ENST00000494458 SH2D5Q6ZV89 423 aa6.95□□□□□ -1.3
MSH5-217ENST00000494458 HTR3DQ70Z44 454 aa6.95□□□□□ -1.3
MSH5-217ENST00000494458 CHST9Q7L1S5 443 aa6.95□□□□□ -1.3
MSH5-217ENST00000494458 CCNJLQ8IV13 435 aa6.95□□□□□ -1.3
MSH5-217ENST00000494458 C7orf61Q8IZ16 206 aa6.95□□□□□ -1.3
MSH5-217ENST00000494458 KREMEN2Q8NCW0 462 aa6.95□□□□□ -1.3
MSH5-217ENST00000494458 LRRN4Q8WUT4 740 aa6.95□□□□□ -1.3
MSH5-217ENST00000494458 C9orf72Q96LT7 481 aa6.95□□□□□ -1.3
MSH5-217ENST00000494458 ZNF512Q96ME7 567 aaPredicted RBP6.95□□□□□ -1.3
MSH5-217ENST00000494458 ZNF599Q96NL3 588 aa6.95□□□□□ -1.3
MSH5-217ENST00000494458 PPP1R2P1Q96PQ5 205 aa6.95□□□□□ -1.3
MSH5-217ENST00000494458 EBNA1BP2Q99848 306 aaKnown RBP6.95□□□□□ -1.3
MSH5-217ENST00000494458 HTATIP2Q9BUP3 242 aa6.95□□□□□ -1.3
MSH5-217ENST00000494458 MLPHQ9BV36 600 aaPredicted RBP6.95□□□□□ -1.3
MSH5-217ENST00000494458 EMILIN2Q9BXX0 1053 aa6.95□□□□□ -1.3
MSH5-217ENST00000494458 ACE2Q9BYF1 805 aaPredicted RBP6.95□□□□□ -1.3
MSH5-217ENST00000494458 MAGEH1Q9H213 219 aa6.95□□□□□ -1.3
MSH5-217ENST00000494458 GBA3Q9H227 469 aa6.95□□□□□ -1.3
MSH5-217ENST00000494458 MTIF3Q9H2K0 278 aaKnown RBP6.95□□□□□ -1.3
MSH5-217ENST00000494458 ACSS3Q9H6R3 686 aa6.95□□□□□ -1.3
MSH5-217ENST00000494458 ATP13A1Q9HD20 1204 aa6.95□□□□□ -1.3
MSH5-217ENST00000494458 SAYSD1Q9NPB0 183 aa6.95□□□□□ -1.3
MSH5-217ENST00000494458 CASS4Q9NQ75 786 aa6.95□□□□□ -1.3
MSH5-217ENST00000494458 MPP6Q9NZW5 540 aa6.95□□□□□ -1.3
MSH5-217ENST00000494458 DNMT3BQ9UBC3 853 aaKnown RBP6.95□□□□□ -1.3
MSH5-217ENST00000494458 PCDHGA4Q9Y5G9 962 aa6.95□□□□□ -1.3
MSH5-217ENST00000494458 PCDHA11Q9Y5I1 949 aa6.95□□□□□ -1.3
MSH5-217ENST00000494458 NR2E3Q9Y5X4 410 aa6.95□□□□□ -1.3
MSH5-217ENST00000494458 MYO16Q9Y6X6 1858 aa6.94□□□□□ -1.3
MSH5-217ENST00000494458 ANAPC1Q9H1A4 1944 aa6.94□□□□□ -1.3
MSH5-217ENST00000494458 ILVBLA1L0T0 632 aa6.94□□□□□ -1.3
MSH5-217ENST00000494458 C2orf78A6NCI8 922 aa6.94□□□□□ -1.3
MSH5-217ENST00000494458 GOLGA6CA6NDK9 693 aa6.94□□□□□ -1.3
MSH5-217ENST00000494458 HIDE1A8MVS5 230 aa6.94□□□□□ -1.3
MSH5-217ENST00000494458 RASA4BC9J798 803 aa6.94□□□□□ -1.3
MSH5-217ENST00000494458 KCNK1O00180 336 aa6.94□□□□□ -1.3
MSH5-217ENST00000494458 AP3B1O00203 1094 aa6.94□□□□□ -1.3
MSH5-217ENST00000494458 RASA4O43374 803 aa6.94□□□□□ -1.3
MSH5-217ENST00000494458 CDH16O75309 829 aa6.94□□□□□ -1.3
MSH5-217ENST00000494458 AVILO75366 819 aa6.94□□□□□ -1.3
MSH5-217ENST00000494458 CLDN11O75508 207 aa6.94□□□□□ -1.3
MSH5-217ENST00000494458 STK10O94804 968 aaKnown RBP6.94□□□□□ -1.3
MSH5-217ENST00000494458 ACSL3O95573 720 aa6.94□□□□□ -1.3
MSH5-217ENST00000494458 FGF19O95750 216 aa6.94□□□□□ -1.3
MSH5-217ENST00000494458 JCHAINP01591 159 aa6.94□□□□□ -1.3
MSH5-217ENST00000494458 APRTP07741 180 aa6.94□□□□□ -1.3
MSH5-217ENST00000494458 HNRNPA1P09651 372 aaKnown RBP eCLIP6.94□□□□□ -1.3
MSH5-217ENST00000494458 GOLGA6DP0CG33 693 aa6.94□□□□□ -1.3
MSH5-217ENST00000494458 PSMA3P25788 255 aa6.94□□□□□ -1.3
MSH5-217ENST00000494458 DDX6P26196 483 aaKnown RBP eCLIP6.94□□□□□ -1.3
MSH5-217ENST00000494458 ELK3P41970 407 aa6.94□□□□□ -1.3
MSH5-217ENST00000494458 GRIA1P42261 906 aa6.94□□□□□ -1.3
MSH5-217ENST00000494458 SLC11A2P49281 568 aa6.94□□□□□ -1.3
MSH5-217ENST00000494458 HARS2P49590 506 aaKnown RBP6.94□□□□□ -1.3
MSH5-217ENST00000494458 PAPOLAP51003 745 aaKnown RBP6.94□□□□□ -1.3
MSH5-217ENST00000494458 BASP1P80723 227 aaKnown RBP6.94□□□□□ -1.3
MSH5-217ENST00000494458 SARNPP82979 210 aaKnown RBP6.94□□□□□ -1.3
MSH5-217ENST00000494458 KRT71Q3SY84 523 aa6.94□□□□□ -1.3
MSH5-217ENST00000494458 DNAJC21Q5F1R6 531 aaKnown RBP6.94□□□□□ -1.3
MSH5-217ENST00000494458 MPP7Q5T2T1 576 aa6.94□□□□□ -1.3
MSH5-217ENST00000494458 TTC39BQ5VTQ0 682 aaPredicted RBP6.94□□□□□ -1.3
MSH5-217ENST00000494458 RAP1GAP2Q684P5 730 aa6.94□□□□□ -1.3
MSH5-217ENST00000494458 ITPRIPL1Q6GPH6 555 aa6.94□□□□□ -1.3
MSH5-217ENST00000494458 DENND5AQ6IQ26 1287 aa6.94□□□□□ -1.3
MSH5-217ENST00000494458 RWDD4Q6NW29 188 aaKnown RBP6.94□□□□□ -1.3
MSH5-217ENST00000494458 RANBP10Q6VN20 620 aa6.94□□□□□ -1.3
MSH5-217ENST00000494458 ARHGAP36Q6ZRI8 547 aa6.94□□□□□ -1.3
MSH5-217ENST00000494458 ARHGEF18Q6ZSZ5 1173 aa6.94□□□□□ -1.3
MSH5-217ENST00000494458 C3orf62Q6ZUJ4 267 aa6.94□□□□□ -1.3
MSH5-217ENST00000494458 PID1Q7Z2X4 250 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms