RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 PJA2O43164 708 aa12.79□□□□□ -0.36
TRA2A-209ENST00000494255 BUB1BO60566 1050 aaPredicted RBP12.79□□□□□ -0.36
TRA2A-209ENST00000494255 RAMP2O60895 175 aa12.79□□□□□ -0.36
TRA2A-209ENST00000494255 SP9P0CG40 484 aa12.79□□□□□ -0.36
TRA2A-209ENST00000494255 GOT1P17174 413 aa12.79□□□□□ -0.36
TRA2A-209ENST00000494255 COL9A1P20849 921 aa12.79□□□□□ -0.36
TRA2A-209ENST00000494255 HOXA6P31267 233 aa12.79□□□□□ -0.36
TRA2A-209ENST00000494255 NUMBP49757 651 aa12.79□□□□□ -0.36
TRA2A-209ENST00000494255 CDH6P55285 790 aa12.79□□□□□ -0.36
TRA2A-209ENST00000494255 KIF5AQ12840 1032 aa12.79□□□□□ -0.36
TRA2A-209ENST00000494255 ENPP2Q13822 863 aa12.79□□□□□ -0.36
TRA2A-209ENST00000494255 IFI16Q16666 785 aaKnown RBP12.79□□□□□ -0.36
TRA2A-209ENST00000494255 TSSK4Q6SA08 328 aa12.79□□□□□ -0.36
TRA2A-209ENST00000494255 TMEM92Q6UXU6 159 aa12.79□□□□□ -0.36
TRA2A-209ENST00000494255 CPNE8Q86YQ8 564 aa12.79□□□□□ -0.36
TRA2A-209ENST00000494255 MAP7D3Q8IWC1 876 aa12.79□□□□□ -0.36
TRA2A-209ENST00000494255 DCAF4L2Q8NA75 395 aa12.79□□□□□ -0.36
TRA2A-209ENST00000494255 KCTD6Q8NC69 237 aa12.79□□□□□ -0.36
TRA2A-209ENST00000494255 OR7D4Q8NG98 312 aa12.79□□□□□ -0.36
TRA2A-209ENST00000494255 ALG14Q96F25 216 aa12.79□□□□□ -0.36
TRA2A-209ENST00000494255 MAGEH1Q9H213 219 aa12.79□□□□□ -0.36
TRA2A-209ENST00000494255 ATP13A1Q9HD20 1204 aa12.79□□□□□ -0.36
TRA2A-209ENST00000494255 CWC15Q9P013 229 aaKnown RBP12.79□□□□□ -0.36
TRA2A-209ENST00000494255 BCCIPQ9P287 314 aaKnown RBP eCLIP12.79□□□□□ -0.36
TRA2A-209ENST00000494255 HPCAL4Q9UM19 191 aa12.79□□□□□ -0.36
TRA2A-209ENST00000494255 OR51B4Q9Y5P0 310 aa12.79□□□□□ -0.36
TRA2A-209ENST00000494255 A0A0D9SEW6 157 aa12.78□□□□□ -0.36
TRA2A-209ENST00000494255 TCRBV21S2A2A0A5A6 115 aa12.78□□□□□ -0.36
TRA2A-209ENST00000494255 BUB1O43683 1085 aa12.78□□□□□ -0.36
TRA2A-209ENST00000494255 EPHX1P07099 455 aa12.78□□□□□ -0.36
TRA2A-209ENST00000494255 PRKCHP24723 683 aa12.78□□□□□ -0.36
TRA2A-209ENST00000494255 CTSOP43234 321 aaPredicted RBP12.78□□□□□ -0.36
TRA2A-209ENST00000494255 TAS2R40P59535 323 aa12.78□□□□□ -0.36
TRA2A-209ENST00000494255 TCF15Q12870 199 aa12.78□□□□□ -0.36
TRA2A-209ENST00000494255 POLD3Q15054 466 aaPredicted RBP12.78□□□□□ -0.36
TRA2A-209ENST00000494255 PDK2Q15119 407 aa12.78□□□□□ -0.36
TRA2A-209ENST00000494255 PTPRNQ16849 979 aa12.78□□□□□ -0.36
TRA2A-209ENST00000494255 ODF2Q5BJF6 829 aa12.78□□□□□ -0.36
TRA2A-209ENST00000494255 HEATR6Q6AI08 1181 aaKnown RBP12.78□□□□□ -0.36
TRA2A-209ENST00000494255 IL31Q6EBC2 164 aa12.78□□□□□ -0.36
TRA2A-209ENST00000494255 POLNQ7Z5Q5 900 aa12.78□□□□□ -0.36
TRA2A-209ENST00000494255 DAAM2Q86T65 1068 aa12.78□□□□□ -0.36
TRA2A-209ENST00000494255 ZNF354CQ86Y25 554 aa12.78□□□□□ -0.36
TRA2A-209ENST00000494255 KDM1BQ8NB78 822 aa12.78□□□□□ -0.36
TRA2A-209ENST00000494255 TPCN2Q8NHX9 752 aa12.78□□□□□ -0.36
TRA2A-209ENST00000494255 RPL10LQ96L21 214 aaKnown RBP12.78□□□□□ -0.36
TRA2A-209ENST00000494255 PSMB7Q99436 277 aa12.78□□□□□ -0.36
TRA2A-209ENST00000494255 LACRTQ9GZZ8 138 aa12.78□□□□□ -0.36
TRA2A-209ENST00000494255 TMEM245Q9H330 911 aa12.78□□□□□ -0.36
TRA2A-209ENST00000494255 PCDH18Q9HCL0 1135 aa12.78□□□□□ -0.36
TRA2A-209ENST00000494255 ZSCAN32Q9NX65 697 aa12.78□□□□□ -0.36
TRA2A-209ENST00000494255 RCOR3Q9P2K3 495 aaPredicted RBP12.78□□□□□ -0.36
TRA2A-209ENST00000494255 SUN2Q9UH99 717 aa12.78□□□□□ -0.36
TRA2A-209ENST00000494255 RAD54BQ9Y620 910 aa12.78□□□□□ -0.36
TRA2A-209ENST00000494255 CBX4O00257 560 aa12.77□□□□□ -0.36
TRA2A-209ENST00000494255 TDGF1P13385 188 aa12.77□□□□□ -0.36
TRA2A-209ENST00000494255 HLA-EP13747 358 aa12.77□□□□□ -0.36
TRA2A-209ENST00000494255 TNNT1P13805 278 aa12.77□□□□□ -0.36
TRA2A-209ENST00000494255 ERCC2P18074 760 aa12.77□□□□□ -0.36
TRA2A-209ENST00000494255 COMTP21964 271 aa12.77□□□□□ -0.36
TRA2A-209ENST00000494255 YBEYP58557 167 aaPredicted RBP12.77□□□□□ -0.36
TRA2A-209ENST00000494255 DPYSQ14117 519 aa12.77□□□□□ -0.36
TRA2A-209ENST00000494255 ATP13A4Q4VNC1 1196 aa12.77□□□□□ -0.36
TRA2A-209ENST00000494255 LRRC38Q5VT99 294 aa12.77□□□□□ -0.36
TRA2A-209ENST00000494255 ANO7Q6IWH7 933 aa12.77□□□□□ -0.36
TRA2A-209ENST00000494255 RETSATQ6NUM9 610 aa12.77□□□□□ -0.36
TRA2A-209ENST00000494255 C11orf63Q6NUN7 778 aa12.77□□□□□ -0.36
TRA2A-209ENST00000494255 ZC3H14Q6PJT7 736 aaKnown RBP12.77□□□□□ -0.36
TRA2A-209ENST00000494255 RHOT1Q8IXI2 618 aa12.77□□□□□ -0.36
TRA2A-209ENST00000494255 PGBD3Q8N328 593 aa12.77□□□□□ -0.36
TRA2A-209ENST00000494255 HMGB4Q8WW32 186 aa12.77□□□□□ -0.36
TRA2A-209ENST00000494255 ARHGEF2Q92974 986 aaKnown RBP12.77□□□□□ -0.36
TRA2A-209ENST00000494255 CSPG4P5Q96PW8 444 aa12.77□□□□□ -0.36
TRA2A-209ENST00000494255 TSGA10Q9BZW7 698 aa12.77□□□□□ -0.36
TRA2A-209ENST00000494255 NDFIP2Q9NV92 336 aa12.77□□□□□ -0.36
TRA2A-209ENST00000494255 VPS51Q9UID3 782 aa12.77□□□□□ -0.36
TRA2A-209ENST00000494255 ADGRG1Q9Y653 693 aa12.77□□□□□ -0.36
TRA2A-209ENST00000494255 ALG6Q9Y672 507 aa12.77□□□□□ -0.36
TRA2A-209ENST00000494255 DUSP10Q9Y6W6 482 aa12.77□□□□□ -0.36
TRA2A-209ENST00000494255 MUC22E2RYF6 1773 aaPredicted RBP12.77□□□□□ -0.36
TRA2A-209ENST00000494255 A0A1W2PQF6 199 aa12.77□□□□□ -0.37
TRA2A-209ENST00000494255 SNAP91O60641 907 aa12.77□□□□□ -0.37
TRA2A-209ENST00000494255 CCDC175P0C221 793 aa12.77□□□□□ -0.37
TRA2A-209ENST00000494255 ACVRL1P37023 503 aa12.77□□□□□ -0.37
TRA2A-209ENST00000494255 PXNP49023 591 aaPredicted RBP12.77□□□□□ -0.37
TRA2A-209ENST00000494255 FNTBP49356 437 aa12.77□□□□□ -0.37
TRA2A-209ENST00000494255 STK19P49842 368 aaPredicted RBP12.77□□□□□ -0.37
TRA2A-209ENST00000494255 VASPP50552 380 aaPredicted RBP12.77□□□□□ -0.37
TRA2A-209ENST00000494255 NDST2P52849 883 aa12.77□□□□□ -0.37
TRA2A-209ENST00000494255 GEMIN4P57678 1058 aaKnown RBP12.77□□□□□ -0.37
TRA2A-209ENST00000494255 CCZ1BP86790 482 aa12.77□□□□□ -0.37
TRA2A-209ENST00000494255 CCZ1P86791 482 aaPredicted RBP12.77□□□□□ -0.37
TRA2A-209ENST00000494255 PARP15Q460N3 678 aa12.77□□□□□ -0.37
TRA2A-209ENST00000494255 ACCSLQ4AC99 568 aa12.77□□□□□ -0.37
TRA2A-209ENST00000494255 KIAA1211LQ6NV74 962 aa12.77□□□□□ -0.37
TRA2A-209ENST00000494255 UMODL1-AS1Q8N2C9 162 aa12.77□□□□□ -0.37
TRA2A-209ENST00000494255 LZTR1Q8N653 840 aa12.77□□□□□ -0.37
TRA2A-209ENST00000494255 ZNF366Q8N895 744 aa12.77□□□□□ -0.37
TRA2A-209ENST00000494255 ATRIPQ8WXE1 791 aa12.77□□□□□ -0.37
TRA2A-209ENST00000494255 ATOH1Q92858 354 aaPredicted RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms