RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 MTNR1AP48039 350 aa6.66□□□□□ -1.34
SMC2-205ENST00000493955 RARSP54136 660 aaKnown RBP6.66□□□□□ -1.34
SMC2-205ENST00000493955 UFM1P61960 85 aa6.66□□□□□ -1.34
SMC2-205ENST00000493955 IL13RA2Q14627 380 aa6.66□□□□□ -1.34
SMC2-205ENST00000493955 ZNF280DQ6N043 979 aa6.66□□□□□ -1.34
SMC2-205ENST00000493955 TMEM65Q6PI78 240 aa6.66□□□□□ -1.34
SMC2-205ENST00000493955 NAPRTQ6XQN6 538 aa6.66□□□□□ -1.34
SMC2-205ENST00000493955 RNF144BQ7Z419 303 aa6.66□□□□□ -1.34
SMC2-205ENST00000493955 TMEM200AQ86VY9 491 aa6.66□□□□□ -1.34
SMC2-205ENST00000493955 CAVIN3Q969G5 261 aa6.66□□□□□ -1.34
SMC2-205ENST00000493955 ZNF503Q96F45 646 aa6.66□□□□□ -1.34
SMC2-205ENST00000493955 MACROD1Q9BQ69 325 aa6.66□□□□□ -1.34
SMC2-205ENST00000493955 LBHD1Q9BQE6 289 aaPredicted RBP6.66□□□□□ -1.34
SMC2-205ENST00000493955 ABHD14AQ9BUJ0 271 aa6.66□□□□□ -1.34
SMC2-205ENST00000493955 MUC13Q9H3R2 512 aa6.66□□□□□ -1.34
SMC2-205ENST00000493955 MPP6Q9NZW5 540 aa6.66□□□□□ -1.34
SMC2-205ENST00000493955 HDAC6Q9UBN7 1215 aa6.66□□□□□ -1.34
SMC2-205ENST00000493955 MCIDASD6RGH6 385 aa6.65□□□□□ -1.35
SMC2-205ENST00000493955 SGPL1O95470 568 aa6.65□□□□□ -1.35
SMC2-205ENST00000493955 CHRM4P08173 479 aa6.65□□□□□ -1.35
SMC2-205ENST00000493955 RFPL3SP0C7P2 107 aa6.65□□□□□ -1.35
SMC2-205ENST00000493955 COX7A2P14406 83 aa6.65□□□□□ -1.35
SMC2-205ENST00000493955 ATF7P17544 494 aaPredicted RBP6.65□□□□□ -1.35
SMC2-205ENST00000493955 TGM2P21980 687 aa6.65□□□□□ -1.35
SMC2-205ENST00000493955 BSGP35613 385 aa6.65□□□□□ -1.35
SMC2-205ENST00000493955 ZNF84P51523 738 aa6.65□□□□□ -1.35
SMC2-205ENST00000493955 ADPRHP54922 357 aa6.65□□□□□ -1.35
SMC2-205ENST00000493955 CUL4AQ13619 759 aa6.65□□□□□ -1.35
SMC2-205ENST00000493955 LARS2Q15031 903 aaKnown RBP6.65□□□□□ -1.35
SMC2-205ENST00000493955 NAPEPLDQ6IQ20 393 aa6.65□□□□□ -1.35
SMC2-205ENST00000493955 KLHL24Q6TFL4 600 aa6.65□□□□□ -1.35
SMC2-205ENST00000493955 RRM2BQ7LG56 351 aa6.65□□□□□ -1.35
SMC2-205ENST00000493955 ULK2Q8IYT8 1036 aa6.65□□□□□ -1.35
SMC2-205ENST00000493955 CNTROBQ8N137 903 aa6.65□□□□□ -1.35
SMC2-205ENST00000493955 C1orf131Q8NDD1 294 aaKnown RBP6.65□□□□□ -1.35
SMC2-205ENST00000493955 DAZAP1Q96EP5 407 aaKnown RBP6.65□□□□□ -1.35
SMC2-205ENST00000493955 CENPOQ9BU64 300 aa6.65□□□□□ -1.35
SMC2-205ENST00000493955 CYP4F11Q9HBI6 524 aa6.65□□□□□ -1.35
SMC2-205ENST00000493955 RAPGEFL1Q9UHV5 662 aa6.65□□□□□ -1.35
SMC2-205ENST00000493955 HEMK1Q9Y5R4 338 aaPredicted RBP6.65□□□□□ -1.35
SMC2-205ENST00000493955 C17orf100A8MU93 164 aa6.64□□□□□ -1.35
SMC2-205ENST00000493955 ADRA1BP35368 520 aa6.64□□□□□ -1.35
SMC2-205ENST00000493955 EIF3BP55884 814 aaKnown RBP6.64□□□□□ -1.35
SMC2-205ENST00000493955 EFNB1P98172 346 aa6.64□□□□□ -1.35
SMC2-205ENST00000493955 TAP1Q03518 808 aa6.64□□□□□ -1.35
SMC2-205ENST00000493955 FOXE3Q13461 319 aa6.64□□□□□ -1.35
SMC2-205ENST00000493955 MIIPQ5JXC2 388 aa6.64□□□□□ -1.35
SMC2-205ENST00000493955 FNDC7Q5VTL7 733 aa6.64□□□□□ -1.35
SMC2-205ENST00000493955 VSTM1Q6UX27 236 aa6.64□□□□□ -1.35
SMC2-205ENST00000493955 RTL10Q7L3V2 364 aa6.64□□□□□ -1.35
SMC2-205ENST00000493955 GALNT5Q7Z7M9 940 aa6.64□□□□□ -1.35
SMC2-205ENST00000493955 RPAP2Q8IXW5 612 aaPredicted RBP6.64□□□□□ -1.35
SMC2-205ENST00000493955 EXD3Q8N9H8 876 aa6.64□□□□□ -1.35
SMC2-205ENST00000493955 USP6NLQ92738 828 aa6.64□□□□□ -1.35
SMC2-205ENST00000493955 NSUN4Q96CB9 384 aaKnown RBP6.64□□□□□ -1.35
SMC2-205ENST00000493955 KLHL29Q96CT2 875 aa6.64□□□□□ -1.35
SMC2-205ENST00000493955 SYNCQ9H7C4 482 aa6.64□□□□□ -1.35
SMC2-205ENST00000493955 PCDHB16Q9NRJ7 776 aa6.64□□□□□ -1.35
SMC2-205ENST00000493955 SEPT11Q9NVA2 429 aaKnown RBP6.64□□□□□ -1.35
SMC2-205ENST00000493955 UPB1Q9UBR1 384 aa6.64□□□□□ -1.35
SMC2-205ENST00000493955 TGFB1I1O43294 461 aa6.63□□□□□ -1.35
SMC2-205ENST00000493955 ENO1P06733 434 aaKnown RBP6.63□□□□□ -1.35
SMC2-205ENST00000493955 TYK2P29597 1187 aa6.63□□□□□ -1.35
SMC2-205ENST00000493955 RPL7AP62424 266 aaKnown RBP6.63□□□□□ -1.35
SMC2-205ENST00000493955 NEXNQ0ZGT2 675 aa6.63□□□□□ -1.35
SMC2-205ENST00000493955 SLC18A3Q16572 532 aa6.63□□□□□ -1.35
SMC2-205ENST00000493955 LSM12Q3MHD2 195 aaKnown RBP6.63□□□□□ -1.35
SMC2-205ENST00000493955 FAM153CQ494X1 144 aa6.63□□□□□ -1.35
SMC2-205ENST00000493955 SLC9B1Q4ZJI4 515 aa6.63□□□□□ -1.35
SMC2-205ENST00000493955 SLC30A9Q6PML9 568 aa6.63□□□□□ -1.35
SMC2-205ENST00000493955 TRIM72Q6ZMU5 477 aa6.63□□□□□ -1.35
SMC2-205ENST00000493955 MDGA2Q7Z553 956 aa6.63□□□□□ -1.35
SMC2-205ENST00000493955 PLD5Q8N7P1 536 aa6.63□□□□□ -1.35
SMC2-205ENST00000493955 PDLIM2Q96JY6 352 aa6.63□□□□□ -1.35
SMC2-205ENST00000493955 BBC3Q96PG8 261 aaPredicted RBP6.63□□□□□ -1.35
SMC2-205ENST00000493955 FYTTD1Q96QD9 318 aaKnown RBP6.63□□□□□ -1.35
SMC2-205ENST00000493955 ANKEF1Q9NU02 776 aa6.63□□□□□ -1.35
SMC2-205ENST00000493955 TMEM248Q9NWD8 314 aa6.63□□□□□ -1.35
SMC2-205ENST00000493955 ARL15Q9NXU5 204 aa6.63□□□□□ -1.35
SMC2-205ENST00000493955 FOXJ2Q9P0K8 574 aa6.63□□□□□ -1.35
SMC2-205ENST00000493955 EPN1Q9Y6I3 576 aaPredicted RBP6.63□□□□□ -1.35
SMC2-205ENST00000493955 SPATA31A5Q5VU36 1347 aa6.63□□□□□ -1.35
SMC2-205ENST00000493955 SPATA31A6Q5VVP1 1343 aa6.63□□□□□ -1.35
SMC2-205ENST00000493955 SPATA31A7Q8IWB4 1347 aa6.63□□□□□ -1.35
SMC2-205ENST00000493955 RSF1Q96T23 1441 aaPredicted RBP6.63□□□□□ -1.35
SMC2-205ENST00000493955 TEX13CA0A0J9YWL9 993 aa6.62□□□□□ -1.35
SMC2-205ENST00000493955 C16orf96A6NNT2 1141 aa6.62□□□□□ -1.35
SMC2-205ENST00000493955 BTBD19C9JJ37 291 aa6.62□□□□□ -1.35
SMC2-205ENST00000493955 H7C1Q1 480 aa6.62□□□□□ -1.35
SMC2-205ENST00000493955 GCATO75600 419 aa6.62□□□□□ -1.35
SMC2-205ENST00000493955 SEC14L2O76054 403 aa6.62□□□□□ -1.35
SMC2-205ENST00000493955 SPARCP09486 303 aa6.62□□□□□ -1.35
SMC2-205ENST00000493955 CTCFP49711 727 aaPredicted RBP6.62□□□□□ -1.35
SMC2-205ENST00000493955 CTSWP56202 376 aa6.62□□□□□ -1.35
SMC2-205ENST00000493955 FOXI1Q12951 378 aa6.62□□□□□ -1.35
SMC2-205ENST00000493955 SLC14A1Q13336 389 aa6.62□□□□□ -1.35
SMC2-205ENST00000493955 ZNF667Q5HYK9 610 aa6.62□□□□□ -1.35
SMC2-205ENST00000493955 AADACL2Q6P093 401 aa6.62□□□□□ -1.35
SMC2-205ENST00000493955 TMEM81Q6P7N7 255 aa6.62□□□□□ -1.35
SMC2-205ENST00000493955 ENOSF1Q7L5Y1 443 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms