RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 ZNF396Q96N95 335 aaPredicted RBP14.7□□□□□ -0.06
PRPF40A-211ENST00000493468 DUSP23Q9BVJ7 150 aa14.7□□□□□ -0.06
PRPF40A-211ENST00000493468 ABCG4Q9H172 646 aa14.7□□□□□ -0.06
PRPF40A-211ENST00000493468 NUCKS1Q9H1E3 243 aaKnown RBP14.7□□□□□ -0.06
PRPF40A-211ENST00000493468 FAM13BQ9NYF5 915 aa14.7□□□□□ -0.06
PRPF40A-211ENST00000493468 SATB2Q9UPW6 733 aa14.7□□□□□ -0.06
PRPF40A-211ENST00000493468 TLR6Q9Y2C9 796 aa14.7□□□□□ -0.06
PRPF40A-211ENST00000493468 HEMK1Q9Y5R4 338 aaPredicted RBP14.7□□□□□ -0.06
PRPF40A-211ENST00000493468 A0A1W2PNU3 283 aaPredicted RBP14.69□□□□□ -0.06
PRPF40A-211ENST00000493468 NEMP2A6NFY4 417 aa14.69□□□□□ -0.06
PRPF40A-211ENST00000493468 SCAMP1O15126 338 aa14.69□□□□□ -0.06
PRPF40A-211ENST00000493468 ALOX15BO15296 676 aa14.69□□□□□ -0.06
PRPF40A-211ENST00000493468 LTFP02788 710 aa14.69□□□□□ -0.06
PRPF40A-211ENST00000493468 PSMC2P35998 433 aaKnown RBP14.69□□□□□ -0.06
PRPF40A-211ENST00000493468 STK19P49842 368 aaPredicted RBP14.69□□□□□ -0.06
PRPF40A-211ENST00000493468 MXI1P50539 228 aa14.69□□□□□ -0.06
PRPF40A-211ENST00000493468 METAP1P53582 386 aa14.69□□□□□ -0.06
PRPF40A-211ENST00000493468 DCAF6Q58WW2 860 aa14.69□□□□□ -0.06
PRPF40A-211ENST00000493468 C3orf38Q5JPI3 329 aa14.69□□□□□ -0.06
PRPF40A-211ENST00000493468 NEK5Q6P3R8 708 aa14.69□□□□□ -0.06
PRPF40A-211ENST00000493468 CLEC14AQ86T13 490 aa14.69□□□□□ -0.06
PRPF40A-211ENST00000493468 GRAMD1CQ8IYS0 662 aa14.69□□□□□ -0.06
PRPF40A-211ENST00000493468 CEP57L1Q8IYX8 460 aa14.69□□□□□ -0.06
PRPF40A-211ENST00000493468 APCDD1Q8J025 514 aa14.69□□□□□ -0.06
PRPF40A-211ENST00000493468 FAM174AQ8TBP5 190 aa14.69□□□□□ -0.06
PRPF40A-211ENST00000493468 MAPK15Q8TD08 544 aa14.69□□□□□ -0.06
PRPF40A-211ENST00000493468 OR8D1Q8WZ84 308 aa14.69□□□□□ -0.06
PRPF40A-211ENST00000493468 SLC39A13Q96H72 371 aa14.69□□□□□ -0.06
PRPF40A-211ENST00000493468 PRR11Q96HE9 360 aaPredicted RBP14.69□□□□□ -0.06
PRPF40A-211ENST00000493468 INTS4Q96HW7 963 aaKnown RBP14.69□□□□□ -0.06
PRPF40A-211ENST00000493468 RPL10LQ96L21 214 aaKnown RBP14.69□□□□□ -0.06
PRPF40A-211ENST00000493468 SERPINB11Q96P15 392 aa14.69□□□□□ -0.06
PRPF40A-211ENST00000493468 FAM117AQ9C073 453 aa14.69□□□□□ -0.06
PRPF40A-211ENST00000493468 MMRN2Q9H8L6 949 aa14.69□□□□□ -0.06
PRPF40A-211ENST00000493468 UPF2Q9HAU5 1272 aaKnown RBP14.69□□□□□ -0.06
PRPF40A-211ENST00000493468 RAB20Q9NX57 234 aa14.69□□□□□ -0.06
PRPF40A-211ENST00000493468 NCKIPSDQ9NZQ3 722 aa14.69□□□□□ -0.06
PRPF40A-211ENST00000493468 RP1P56715 2156 aa14.68□□□□□ -0.06
PRPF40A-211ENST00000493468 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.68□□□□□ -0.06
PRPF40A-211ENST00000493468 C1QTNF3-AMACRE9PGA6 284 aa14.68□□□□□ -0.06
PRPF40A-211ENST00000493468 O00370 1275 aa14.68□□□□□ -0.06
PRPF40A-211ENST00000493468 NTRK1P04629 796 aa14.68□□□□□ -0.06
PRPF40A-211ENST00000493468 MYL1P05976 194 aa14.68□□□□□ -0.06
PRPF40A-211ENST00000493468 VDRP11473 427 aa14.68□□□□□ -0.06
PRPF40A-211ENST00000493468 VAV1P15498 845 aa14.68□□□□□ -0.06
PRPF40A-211ENST00000493468 PLK1P53350 603 aa14.68□□□□□ -0.06
PRPF40A-211ENST00000493468 CNTN1Q12860 1018 aa14.68□□□□□ -0.06
PRPF40A-211ENST00000493468 ARL13BQ3SXY8 428 aa14.68□□□□□ -0.06
PRPF40A-211ENST00000493468 RESP18Q5W5W9 173 aa14.68□□□□□ -0.06
PRPF40A-211ENST00000493468 CFAP52Q8N1V2 620 aa14.68□□□□□ -0.06
PRPF40A-211ENST00000493468 IFI44Q8TCB0 444 aa14.68□□□□□ -0.06
PRPF40A-211ENST00000493468 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.68□□□□□ -0.06
PRPF40A-211ENST00000493468 SARDHQ9UL12 918 aa14.68□□□□□ -0.06
PRPF40A-211ENST00000493468 KIAA1257Q9ULG3 409 aa14.68□□□□□ -0.06
PRPF40A-211ENST00000493468 PPM1HQ9ULR3 514 aa14.68□□□□□ -0.06
PRPF40A-211ENST00000493468 CA5BQ9Y2D0 317 aa14.68□□□□□ -0.06
PRPF40A-211ENST00000493468 FLNCQ14315 2725 aa14.67□□□□□ -0.06
PRPF40A-211ENST00000493468 K7ESM1 405 aa14.67□□□□□ -0.06
PRPF40A-211ENST00000493468 ACTN4O43707 911 aaKnown RBP14.67□□□□□ -0.06
PRPF40A-211ENST00000493468 STX10O60499 249 aa14.67□□□□□ -0.06
PRPF40A-211ENST00000493468 TCEA3O75764 348 aa14.67□□□□□ -0.06
PRPF40A-211ENST00000493468 GABBR2O75899 941 aa14.67□□□□□ -0.06
PRPF40A-211ENST00000493468 LCP1P13796 627 aa14.67□□□□□ -0.06
PRPF40A-211ENST00000493468 RPL13P26373 211 aaKnown RBP14.67□□□□□ -0.06
PRPF40A-211ENST00000493468 TAS2R38P59533 333 aa14.67□□□□□ -0.06
PRPF40A-211ENST00000493468 YWHAEP62258 255 aaKnown RBP14.67□□□□□ -0.06
PRPF40A-211ENST00000493468 NFATC3Q12968 1075 aa14.67□□□□□ -0.06
PRPF40A-211ENST00000493468 CLN3Q13286 438 aa14.67□□□□□ -0.06
PRPF40A-211ENST00000493468 ZCCHC8Q6NZY4 707 aaKnown RBP14.67□□□□□ -0.06
PRPF40A-211ENST00000493468 LCLAT1Q6UWP7 414 aa14.67□□□□□ -0.06
PRPF40A-211ENST00000493468 ABI3BPQ7Z7G0 1075 aa14.67□□□□□ -0.06
PRPF40A-211ENST00000493468 DCP2Q8IU60 420 aaKnown RBP14.67□□□□□ -0.06
PRPF40A-211ENST00000493468 OR13H1Q8NG92 308 aa14.67□□□□□ -0.06
PRPF40A-211ENST00000493468 TPCN2Q8NHX9 752 aa14.67□□□□□ -0.06
PRPF40A-211ENST00000493468 UBA3Q8TBC4 463 aa14.67□□□□□ -0.06
PRPF40A-211ENST00000493468 DQX1Q8TE96 717 aaKnown RBP14.67□□□□□ -0.06
PRPF40A-211ENST00000493468 SLC35F5Q8WV83 523 aa14.67□□□□□ -0.06
PRPF40A-211ENST00000493468 EEF2KMTQ96G04 330 aa14.67□□□□□ -0.06
PRPF40A-211ENST00000493468 STARD5Q9NSY2 213 aa14.67□□□□□ -0.06
PRPF40A-211ENST00000493468 ENTPD2Q9Y5L3 495 aa14.67□□□□□ -0.06
PRPF40A-211ENST00000493468 TRPM6Q9BX84 2022 aa14.66□□□□□ -0.06
PRPF40A-211ENST00000493468 MCF2LO15068 1137 aa14.66□□□□□ -0.06
PRPF40A-211ENST00000493468 ATP9BO43861 1147 aa14.66□□□□□ -0.06
PRPF40A-211ENST00000493468 FBXO21O94952 628 aa14.66□□□□□ -0.06
PRPF40A-211ENST00000493468 CD19P15391 556 aa14.66□□□□□ -0.06
PRPF40A-211ENST00000493468 TGM2P21980 687 aa14.66□□□□□ -0.06
PRPF40A-211ENST00000493468 HNRNPA2B1P22626 353 aaKnown RBP14.66□□□□□ -0.06
PRPF40A-211ENST00000493468 AKT2P31751 481 aa14.66□□□□□ -0.06
PRPF40A-211ENST00000493468 OXCT1P55809 520 aa14.66□□□□□ -0.06
PRPF40A-211ENST00000493468 HNRNPKP61978 463 aaKnown RBP eCLIP14.66□□□□□ -0.06
PRPF40A-211ENST00000493468 CUL2Q13617 745 aa14.66□□□□□ -0.06
PRPF40A-211ENST00000493468 ZNF284Q2VY69 593 aa14.66□□□□□ -0.06
PRPF40A-211ENST00000493468 POM121L1PQ3SYA9 428 aa14.66□□□□□ -0.06
PRPF40A-211ENST00000493468 ATG14Q6ZNE5 492 aa14.66□□□□□ -0.06
PRPF40A-211ENST00000493468 RBM44Q6ZP01 1051 aaKnown RBP14.66□□□□□ -0.06
PRPF40A-211ENST00000493468 LGI2Q8N0V4 545 aa14.66□□□□□ -0.06
PRPF40A-211ENST00000493468 SLC22A18ASQ8N1D0 253 aa14.66□□□□□ -0.06
PRPF40A-211ENST00000493468 ARL14Q8N4G2 192 aa14.66□□□□□ -0.06
PRPF40A-211ENST00000493468 EXD3Q8N9H8 876 aa14.66□□□□□ -0.06
PRPF40A-211ENST00000493468 ERCC4Q92889 916 aaPredicted RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms