RNA–Protein interactions for RNA: ENST00000493455.6

HPS4-216, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 986 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-216ENST00000493455 DONSONQ9NYP3 566 aa16.14■□□□□ 0.17
HPS4-216ENST00000493455 SMARCAL1Q9NZC9 954 aa16.14■□□□□ 0.17
HPS4-216ENST00000493455 SAE1Q9UBE0 346 aaPredicted RBP16.14■□□□□ 0.17
HPS4-216ENST00000493455 INTS6Q9UL03 887 aaKnown RBP16.14■□□□□ 0.17
HPS4-216ENST00000493455 SNX12Q9UMY4 172 aa16.14■□□□□ 0.17
HPS4-216ENST00000493455 CHD5Q8TDI0 1954 aa16.13■□□□□ 0.17
HPS4-216ENST00000493455 ANTXRLA6NF34 631 aa16.13■□□□□ 0.17
HPS4-216ENST00000493455 ARHGAP42A6NI28 874 aa16.13■□□□□ 0.17
HPS4-216ENST00000493455 PRRT4C9JH25 899 aa16.13■□□□□ 0.17
HPS4-216ENST00000493455 MAN2B1O00754 1011 aa16.13■□□□□ 0.17
HPS4-216ENST00000493455 ZNF185O15231 689 aa16.13■□□□□ 0.17
HPS4-216ENST00000493455 FANCGO15287 622 aa16.13■□□□□ 0.17
HPS4-216ENST00000493455 TJP3O95049 919 aa16.13■□□□□ 0.17
HPS4-216ENST00000493455 GLULP15104 373 aa16.13■□□□□ 0.17
HPS4-216ENST00000493455 PECAM1P16284 738 aaPredicted RBP16.13■□□□□ 0.17
HPS4-216ENST00000493455 ZFXP17010 805 aaPredicted RBP16.13■□□□□ 0.17
HPS4-216ENST00000493455 EIF2DP41214 584 aaKnown RBP16.13■□□□□ 0.17
HPS4-216ENST00000493455 GRIA2P42262 883 aa16.13■□□□□ 0.17
HPS4-216ENST00000493455 CTSOP43234 321 aaPredicted RBP16.13■□□□□ 0.17
HPS4-216ENST00000493455 PAPOLAP51003 745 aaKnown RBP16.13■□□□□ 0.17
HPS4-216ENST00000493455 NDST2P52849 883 aa16.13■□□□□ 0.17
HPS4-216ENST00000493455 PRKCQQ04759 706 aa16.13■□□□□ 0.17
HPS4-216ENST00000493455 LONRF2Q1L5Z9 754 aa16.13■□□□□ 0.17
HPS4-216ENST00000493455 PREPLQ4J6C6 727 aaPredicted RBP16.13■□□□□ 0.17
HPS4-216ENST00000493455 RNF43Q68DV7 783 aa16.13■□□□□ 0.17
HPS4-216ENST00000493455 SLC9A4Q6AI14 798 aa16.13■□□□□ 0.17
HPS4-216ENST00000493455 FSTL4Q6MZW2 842 aa16.13■□□□□ 0.17
HPS4-216ENST00000493455 LINGO4Q6UY18 593 aa16.13■□□□□ 0.17
HPS4-216ENST00000493455 ARHGAP36Q6ZRI8 547 aa16.13■□□□□ 0.17
HPS4-216ENST00000493455 NUDT18Q6ZVK8 323 aa16.13■□□□□ 0.17
HPS4-216ENST00000493455 VSIG1Q86XK7 387 aa16.13■□□□□ 0.17
HPS4-216ENST00000493455 ARHGAP12Q8IWW6 846 aa16.13■□□□□ 0.17
HPS4-216ENST00000493455 UMODL1-AS1Q8N2C9 162 aa16.13■□□□□ 0.17
HPS4-216ENST00000493455 PHTF2Q8N3S3 785 aa16.13■□□□□ 0.17
HPS4-216ENST00000493455 ATPAF2Q8N5M1 289 aa16.13■□□□□ 0.17
HPS4-216ENST00000493455 FLCNQ8NFG4 579 aa16.13■□□□□ 0.17
HPS4-216ENST00000493455 WFIKKN2Q8TEU8 576 aa16.13■□□□□ 0.17
HPS4-216ENST00000493455 COG1Q8WTW3 980 aa16.13■□□□□ 0.17
HPS4-216ENST00000493455 P3H4Q92791 437 aa16.13■□□□□ 0.17
HPS4-216ENST00000493455 ARHGEF2Q92974 986 aaKnown RBP16.13■□□□□ 0.17
HPS4-216ENST00000493455 ERLEC1Q96DZ1 483 aa16.13■□□□□ 0.17
HPS4-216ENST00000493455 MSANTD3Q96H12 275 aa16.13■□□□□ 0.17
HPS4-216ENST00000493455 SHDQ96IW2 340 aa16.13■□□□□ 0.17
HPS4-216ENST00000493455 MS4A14Q96JA4 679 aa16.13■□□□□ 0.17
HPS4-216ENST00000493455 FEM1AQ9BSK4 669 aa16.13■□□□□ 0.17
HPS4-216ENST00000493455 KLC2Q9H0B6 622 aa16.13■□□□□ 0.17
HPS4-216ENST00000493455 MAGEH1Q9H213 219 aa16.13■□□□□ 0.17
HPS4-216ENST00000493455 TBC1D17Q9HA65 648 aa16.13■□□□□ 0.17
HPS4-216ENST00000493455 SP110Q9HB58 689 aa16.13■□□□□ 0.17
HPS4-216ENST00000493455 RBM12Q9NTZ6 932 aaKnown RBP16.13■□□□□ 0.17
HPS4-216ENST00000493455 FBXO10Q9UK96 956 aa16.13■□□□□ 0.17
HPS4-216ENST00000493455 HPCAL4Q9UM19 191 aa16.13■□□□□ 0.17
HPS4-216ENST00000493455 TCRBV7S2A1N4TA0A589 114 aa16.12■□□□□ 0.17
HPS4-216ENST00000493455 ZNF487B1APH4 448 aa16.12■□□□□ 0.17
HPS4-216ENST00000493455 FGGP02679 453 aa16.12■□□□□ 0.17
HPS4-216ENST00000493455 TGM2P21980 687 aa16.12■□□□□ 0.17
HPS4-216ENST00000493455 TIE1P35590 1138 aa16.12■□□□□ 0.17
HPS4-216ENST00000493455 ETFBP38117 255 aa16.12■□□□□ 0.17
HPS4-216ENST00000493455 PAFAH1B3Q15102 231 aaKnown RBP16.12■□□□□ 0.17
HPS4-216ENST00000493455 TAZQ16635 292 aa16.12■□□□□ 0.17
HPS4-216ENST00000493455 PARP15Q460N3 678 aa16.12■□□□□ 0.17
HPS4-216ENST00000493455 EMC10Q5UCC4 262 aa16.12■□□□□ 0.17
HPS4-216ENST00000493455 TMEM215Q68D42 235 aa16.12■□□□□ 0.17
HPS4-216ENST00000493455 BBS12Q6ZW61 710 aa16.12■□□□□ 0.17
HPS4-216ENST00000493455 ADIPOR2Q86V24 386 aa16.12■□□□□ 0.17
HPS4-216ENST00000493455 ZC3H18Q86VM9 953 aaKnown RBP16.12■□□□□ 0.17
HPS4-216ENST00000493455 SLC13A5Q86YT5 568 aaPredicted RBP16.12■□□□□ 0.17
HPS4-216ENST00000493455 LZTR1Q8N653 840 aa16.12■□□□□ 0.17
HPS4-216ENST00000493455 CCNYQ8ND76 341 aa16.12■□□□□ 0.17
HPS4-216ENST00000493455 UCMAQ8WVF2 138 aa16.12■□□□□ 0.17
HPS4-216ENST00000493455 UBE2Q2Q8WVN8 375 aa16.12■□□□□ 0.17
HPS4-216ENST00000493455 PBKQ96KB5 322 aa16.12■□□□□ 0.17
HPS4-216ENST00000493455 LMLNQ96KR4 655 aa16.12■□□□□ 0.17
HPS4-216ENST00000493455 RPL10LQ96L21 214 aaKnown RBP16.12■□□□□ 0.17
HPS4-216ENST00000493455 RETREG1Q9H6L5 497 aa16.12■□□□□ 0.17
HPS4-216ENST00000493455 LRRC19Q9H756 370 aa16.12■□□□□ 0.17
HPS4-216ENST00000493455 VPS51Q9UID3 782 aa16.12■□□□□ 0.17
HPS4-216ENST00000493455 SLC25A13Q9UJS0 675 aa16.12■□□□□ 0.17
HPS4-216ENST00000493455 SLC27A6Q9Y2P4 619 aa16.12■□□□□ 0.17
HPS4-216ENST00000493455 MRPS17Q9Y2R5 130 aaKnown RBP16.12■□□□□ 0.17
HPS4-216ENST00000493455 ACTL7AQ9Y615 435 aa16.12■□□□□ 0.17
HPS4-216ENST00000493455 KANSL1LA0AUZ9 987 aa16.11■□□□□ 0.17
HPS4-216ENST00000493455 TCP1P17987 556 aaKnown RBP16.11■□□□□ 0.17
HPS4-216ENST00000493455 DRD1P21728 446 aa16.11■□□□□ 0.17
HPS4-216ENST00000493455 TARSP26639 723 aaKnown RBP16.11■□□□□ 0.17
HPS4-216ENST00000493455 PTPN7P35236 360 aa16.11■□□□□ 0.17
HPS4-216ENST00000493455 WASP42768 502 aa16.11■□□□□ 0.17
HPS4-216ENST00000493455 STK19P49842 368 aaPredicted RBP16.11■□□□□ 0.17
HPS4-216ENST00000493455 YBEYP58557 167 aaPredicted RBP16.11■□□□□ 0.17
HPS4-216ENST00000493455 OTUD4Q01804 1114 aaKnown RBP16.11■□□□□ 0.17
HPS4-216ENST00000493455 SIGLEC14Q08ET2 396 aa16.11■□□□□ 0.17
HPS4-216ENST00000493455 SLC10A2Q12908 348 aaPredicted RBP16.11■□□□□ 0.17
HPS4-216ENST00000493455 SLC12A1Q13621 1099 aa16.11■□□□□ 0.17
HPS4-216ENST00000493455 DMC1Q14565 340 aa16.11■□□□□ 0.17
HPS4-216ENST00000493455 FNDC3BQ53EP0 1204 aaKnown RBP16.11■□□□□ 0.17
HPS4-216ENST00000493455 C2orf27AQ580R0 203 aa16.11■□□□□ 0.17
HPS4-216ENST00000493455 TMEM196Q5HYL7 178 aa16.11■□□□□ 0.17
HPS4-216ENST00000493455 ZNF783Q6ZMS7 281 aa16.11■□□□□ 0.17
HPS4-216ENST00000493455 SUGP1Q8IWZ8 645 aaKnown RBP16.11■□□□□ 0.17
HPS4-216ENST00000493455 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms