RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 MYEOVQ96EZ4 313 aa9.41□□□□□ -0.9
HDAC3-212ENST00000492407 NOX5Q96PH1 765 aa9.41□□□□□ -0.9
HDAC3-212ENST00000492407 MTG2Q9H4K7 406 aa9.41□□□□□ -0.9
HDAC3-212ENST00000492407 AASDHPPTQ9NRN7 309 aa9.41□□□□□ -0.9
HDAC3-212ENST00000492407 SERGEFQ9UGK8 458 aa9.41□□□□□ -0.9
HDAC3-212ENST00000492407 PPM1HQ9ULR3 514 aa9.41□□□□□ -0.9
HDAC3-212ENST00000492407 CEP83Q9Y592 693 aa9.41□□□□□ -0.9
HDAC3-212ENST00000492407 ATRXP46100 2492 aa9.4□□□□□ -0.9
HDAC3-212ENST00000492407 TBC1D3DA0A087WVF3 549 aa9.4□□□□□ -0.9
HDAC3-212ENST00000492407 TBC1D3IA0A087WXS9 549 aa9.4□□□□□ -0.9
HDAC3-212ENST00000492407 TBC1D3EA0A087X179 549 aa9.4□□□□□ -0.9
HDAC3-212ENST00000492407 TBC1D3KA0A087X1G2 549 aa9.4□□□□□ -0.9
HDAC3-212ENST00000492407 CXorf51AA0A1B0GTR3 108 aa9.4□□□□□ -0.9
HDAC3-212ENST00000492407 TBC1D3FA6NER0 549 aaPredicted RBP9.4□□□□□ -0.9
HDAC3-212ENST00000492407 FAM47DPA6NHR8 397 aa9.4□□□□□ -0.9
HDAC3-212ENST00000492407 TBC1D3LB9A6J9 549 aa9.4□□□□□ -0.9
HDAC3-212ENST00000492407 C1QTNF3-AMACRE9PGA6 284 aa9.4□□□□□ -0.9
HDAC3-212ENST00000492407 KCNK3O14649 394 aa9.4□□□□□ -0.9
HDAC3-212ENST00000492407 ENC1O14682 589 aa9.4□□□□□ -0.9
HDAC3-212ENST00000492407 MCF2LO15068 1137 aa9.4□□□□□ -0.9
HDAC3-212ENST00000492407 PLRG1O43660 514 aaKnown RBP9.4□□□□□ -0.9
HDAC3-212ENST00000492407 ZNF500O60304 480 aaPredicted RBP9.4□□□□□ -0.9
HDAC3-212ENST00000492407 CLDN11O75508 207 aa9.4□□□□□ -0.9
HDAC3-212ENST00000492407 RFPL3O75679 317 aa9.4□□□□□ -0.9
HDAC3-212ENST00000492407 MOCS2O96007 188 aaPredicted RBP9.4□□□□□ -0.9
HDAC3-212ENST00000492407 IL1BP01584 269 aa9.4□□□□□ -0.9
HDAC3-212ENST00000492407 WNT1P04628 370 aa9.4□□□□□ -0.9
HDAC3-212ENST00000492407 TBC1D3HP0C7X1 549 aa9.4□□□□□ -0.9
HDAC3-212ENST00000492407 EPHA8P29322 1005 aaPredicted RBP9.4□□□□□ -0.9
HDAC3-212ENST00000492407 CTSOP43234 321 aaPredicted RBP9.4□□□□□ -0.9
HDAC3-212ENST00000492407 TERF1P54274 439 aa9.4□□□□□ -0.9
HDAC3-212ENST00000492407 PDCLQ13371 301 aa9.4□□□□□ -0.9
HDAC3-212ENST00000492407 COL9A2Q14055 689 aaPredicted RBP9.4□□□□□ -0.9
HDAC3-212ENST00000492407 TBC1D3GQ6DHY5 549 aa9.4□□□□□ -0.9
HDAC3-212ENST00000492407 TBC1D3CQ6IPX1 549 aa9.4□□□□□ -0.9
HDAC3-212ENST00000492407 KLHL10Q6JEL2 608 aa9.4□□□□□ -0.9
HDAC3-212ENST00000492407 TRIM65Q6PJ69 517 aa9.4□□□□□ -0.9
HDAC3-212ENST00000492407 MMS22LQ6ZRQ5 1243 aa9.4□□□□□ -0.9
HDAC3-212ENST00000492407 TBC1D3Q8IZP1 549 aaPredicted RBP9.4□□□□□ -0.9
HDAC3-212ENST00000492407 APCDD1Q8J025 514 aa9.4□□□□□ -0.9
HDAC3-212ENST00000492407 STK40Q8N2I9 435 aa9.4□□□□□ -0.9
HDAC3-212ENST00000492407 C1orf131Q8NDD1 294 aaKnown RBP9.4□□□□□ -0.9
HDAC3-212ENST00000492407 ZNF397Q8NF99 534 aaPredicted RBP9.4□□□□□ -0.9
HDAC3-212ENST00000492407 OR14C36Q8NHC7 312 aa9.4□□□□□ -0.9
HDAC3-212ENST00000492407 MDM1Q8TC05 714 aa9.4□□□□□ -0.9
HDAC3-212ENST00000492407 ADAM32Q8TC27 787 aa9.4□□□□□ -0.9
HDAC3-212ENST00000492407 OR8D1Q8WZ84 308 aa9.4□□□□□ -0.9
HDAC3-212ENST00000492407 TSC1Q92574 1164 aa9.4□□□□□ -0.9
HDAC3-212ENST00000492407 ALG14Q96F25 216 aa9.4□□□□□ -0.9
HDAC3-212ENST00000492407 SERAC1Q96JX3 654 aa9.4□□□□□ -0.9
HDAC3-212ENST00000492407 PPP1R13BQ96KQ4 1090 aa9.4□□□□□ -0.9
HDAC3-212ENST00000492407 SLC6A18Q96N87 628 aa9.4□□□□□ -0.9
HDAC3-212ENST00000492407 FEM1AQ9BSK4 669 aa9.4□□□□□ -0.9
HDAC3-212ENST00000492407 SRRTQ9BXP5 876 aaKnown RBP9.4□□□□□ -0.9
HDAC3-212ENST00000492407 NRSN2Q9GZP1 204 aa9.4□□□□□ -0.9
HDAC3-212ENST00000492407 EBF2Q9HAK2 575 aa9.4□□□□□ -0.9
HDAC3-212ENST00000492407 PREBQ9HCU5 417 aa9.4□□□□□ -0.9
HDAC3-212ENST00000492407 ARHGAP20Q9P2F6 1191 aa9.4□□□□□ -0.9
HDAC3-212ENST00000492407 CYTH4Q9UIA0 394 aa9.4□□□□□ -0.9
HDAC3-212ENST00000492407 RWDD2AQ9UIY3 292 aa9.4□□□□□ -0.9
HDAC3-212ENST00000492407 SLC25A13Q9UJS0 675 aa9.4□□□□□ -0.9
HDAC3-212ENST00000492407 TBC1D30Q9Y2I9 924 aa9.4□□□□□ -0.9
HDAC3-212ENST00000492407 PAXBP1Q9Y5B6 917 aa9.4□□□□□ -0.9
HDAC3-212ENST00000492407 ZFYVE26Q68DK2 2539 aa9.4□□□□□ -0.91
HDAC3-212ENST00000492407 CACNA1GO43497 2377 aa9.39□□□□□ -0.91
HDAC3-212ENST00000492407 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.39□□□□□ -0.91
HDAC3-212ENST00000492407 PRAMEF26H0Y7S4 382 aa9.39□□□□□ -0.91
HDAC3-212ENST00000492407 RIOK3O14730 519 aaKnown RBP9.39□□□□□ -0.91
HDAC3-212ENST00000492407 THAP12O43422 761 aa9.39□□□□□ -0.91
HDAC3-212ENST00000492407 F9P00740 461 aa9.39□□□□□ -0.91
HDAC3-212ENST00000492407 NOS2P35228 1153 aa9.39□□□□□ -0.91
HDAC3-212ENST00000492407 DRD3P35462 400 aa9.39□□□□□ -0.91
HDAC3-212ENST00000492407 CLCN1P35523 988 aa9.39□□□□□ -0.91
HDAC3-212ENST00000492407 SCNN1AP37088 669 aa9.39□□□□□ -0.91
HDAC3-212ENST00000492407 PSMD8P48556 350 aa9.39□□□□□ -0.91
HDAC3-212ENST00000492407 CLCN6P51797 869 aa9.39□□□□□ -0.91
HDAC3-212ENST00000492407 CDH4P55283 916 aa9.39□□□□□ -0.91
HDAC3-212ENST00000492407 BPIFB4P59827 614 aa9.39□□□□□ -0.91
HDAC3-212ENST00000492407 KRT83P78385 493 aa9.39□□□□□ -0.91
HDAC3-212ENST00000492407 PTK2Q05397 1052 aa9.39□□□□□ -0.91
HDAC3-212ENST00000492407 CYP4F3Q08477 520 aa9.39□□□□□ -0.91
HDAC3-212ENST00000492407 ZNF177Q13360 481 aaPredicted RBP9.39□□□□□ -0.91
HDAC3-212ENST00000492407 AUHQ13825 339 aaKnown RBP9.39□□□□□ -0.91
HDAC3-212ENST00000492407 SHBQ15464 509 aa9.39□□□□□ -0.91
HDAC3-212ENST00000492407 SETMARQ53H47 684 aaPredicted RBP9.39□□□□□ -0.91
HDAC3-212ENST00000492407 BRMS1LQ5PSV4 323 aa9.39□□□□□ -0.91
HDAC3-212ENST00000492407 C6orf118Q5T5N4 469 aa9.39□□□□□ -0.91
HDAC3-212ENST00000492407 SFMBT2Q5VUG0 894 aa9.39□□□□□ -0.91
HDAC3-212ENST00000492407 ISM2Q6H9L7 571 aa9.39□□□□□ -0.91
HDAC3-212ENST00000492407 CXorf57Q6NSI4 855 aaKnown RBP9.39□□□□□ -0.91
HDAC3-212ENST00000492407 FBXL22Q6P050 247 aa9.39□□□□□ -0.91
HDAC3-212ENST00000492407 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.39□□□□□ -0.91
HDAC3-212ENST00000492407 GBP6Q6ZN66 633 aa9.39□□□□□ -0.91
HDAC3-212ENST00000492407 C11orf57Q6ZUT1 292 aaPredicted RBP9.39□□□□□ -0.91
HDAC3-212ENST00000492407 SLC26A9Q7LBE3 791 aa9.39□□□□□ -0.91
HDAC3-212ENST00000492407 SETD3Q86TU7 594 aaPredicted RBP9.39□□□□□ -0.91
HDAC3-212ENST00000492407 ZSCAN30Q86W11 494 aa9.39□□□□□ -0.91
HDAC3-212ENST00000492407 DEFB106AQ8N104 65 aa9.39□□□□□ -0.91
HDAC3-212ENST00000492407 WDTC1Q8N5D0 677 aa9.39□□□□□ -0.91
HDAC3-212ENST00000492407 TMIEQ8NEW7 156 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms