RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 HS1BP3Q53T59 392 aa11.38□□□□□ -0.59
TMEM39A-211ENST00000491685 FSCBQ5H9T9 825 aa11.38□□□□□ -0.59
TMEM39A-211ENST00000491685 SYPL2Q5VXT5 272 aa11.38□□□□□ -0.59
TMEM39A-211ENST00000491685 NUGGCQ68CJ6 796 aa11.38□□□□□ -0.59
TMEM39A-211ENST00000491685 ZNF571Q7Z3V5 609 aaPredicted RBP11.38□□□□□ -0.59
TMEM39A-211ENST00000491685 PHF13Q86YI8 300 aaPredicted RBP11.38□□□□□ -0.59
TMEM39A-211ENST00000491685 TMTC1Q8IUR5 882 aa11.38□□□□□ -0.59
TMEM39A-211ENST00000491685 NAXDQ8IW45 347 aa11.38□□□□□ -0.59
TMEM39A-211ENST00000491685 CCDC117Q8IWD4 279 aaPredicted RBP11.38□□□□□ -0.59
TMEM39A-211ENST00000491685 CFAP52Q8N1V2 620 aa11.38□□□□□ -0.59
TMEM39A-211ENST00000491685 CHCHD4Q8N4Q1 142 aa11.38□□□□□ -0.59
TMEM39A-211ENST00000491685 SNX19Q92543 992 aa11.38□□□□□ -0.59
TMEM39A-211ENST00000491685 SLC39A13Q96H72 371 aa11.38□□□□□ -0.59
TMEM39A-211ENST00000491685 MRGPRX3Q96LB0 322 aa11.38□□□□□ -0.59
TMEM39A-211ENST00000491685 PANX2Q96RD6 677 aa11.38□□□□□ -0.59
TMEM39A-211ENST00000491685 PPP1R9BQ96SB3 815 aa11.38□□□□□ -0.59
TMEM39A-211ENST00000491685 CPXM1Q96SM3 734 aa11.38□□□□□ -0.59
TMEM39A-211ENST00000491685 DDX50Q9BQ39 737 aaKnown RBP11.38□□□□□ -0.59
TMEM39A-211ENST00000491685 SELENOOQ9BVL4 669 aa11.38□□□□□ -0.59
TMEM39A-211ENST00000491685 MRPL47Q9HD33 250 aaKnown RBP11.38□□□□□ -0.59
TMEM39A-211ENST00000491685 IGSF10Q6WRI0 2623 aa11.38□□□□□ -0.59
TMEM39A-211ENST00000491685 A0A1B0GVT2 93 aa11.37□□□□□ -0.59
TMEM39A-211ENST00000491685 BCAT2O15382 392 aaPredicted RBP11.37□□□□□ -0.59
TMEM39A-211ENST00000491685 PAPSS1O43252 624 aaPredicted RBP11.37□□□□□ -0.59
TMEM39A-211ENST00000491685 HSF2BPO75031 334 aa11.37□□□□□ -0.59
TMEM39A-211ENST00000491685 MOCS2O96007 188 aaPredicted RBP11.37□□□□□ -0.59
TMEM39A-211ENST00000491685 DLDP09622 509 aaKnown RBP11.37□□□□□ -0.59
TMEM39A-211ENST00000491685 C7P10643 843 aa11.37□□□□□ -0.59
TMEM39A-211ENST00000491685 KRT3P12035 628 aa11.37□□□□□ -0.59
TMEM39A-211ENST00000491685 OXTRP30559 389 aa11.37□□□□□ -0.59
TMEM39A-211ENST00000491685 NOS2P35228 1153 aa11.37□□□□□ -0.59
TMEM39A-211ENST00000491685 CYLC1P35663 651 aaPredicted RBP11.37□□□□□ -0.59
TMEM39A-211ENST00000491685 CSKP41240 450 aa11.37□□□□□ -0.59
TMEM39A-211ENST00000491685 CTSOP43234 321 aaPredicted RBP11.37□□□□□ -0.59
TMEM39A-211ENST00000491685 SLC11A2P49281 568 aa11.37□□□□□ -0.59
TMEM39A-211ENST00000491685 RNASE9P60153 205 aaKnown RBP11.37□□□□□ -0.59
TMEM39A-211ENST00000491685 CENPCQ03188 943 aa11.37□□□□□ -0.59
TMEM39A-211ENST00000491685 C1QBPQ07021 282 aaKnown RBP11.37□□□□□ -0.59
TMEM39A-211ENST00000491685 MAPK8IP2Q13387 824 aaPredicted RBP11.37□□□□□ -0.59
TMEM39A-211ENST00000491685 SPA17Q15506 151 aa11.37□□□□□ -0.59
TMEM39A-211ENST00000491685 MS4A13Q5J8X5 152 aa11.37□□□□□ -0.59
TMEM39A-211ENST00000491685 CCDC122Q5T0U0 273 aa11.37□□□□□ -0.59
TMEM39A-211ENST00000491685 ALKBH5Q6P6C2 394 aaKnown RBP11.37□□□□□ -0.59
TMEM39A-211ENST00000491685 SND1Q7KZF4 910 aaKnown RBP eCLIP11.37□□□□□ -0.591e-7■■□□□ 12.7
TMEM39A-211ENST00000491685 MFN1Q8IWA4 741 aa11.37□□□□□ -0.59
TMEM39A-211ENST00000491685 UNC45BQ8IWX7 931 aa11.37□□□□□ -0.59
TMEM39A-211ENST00000491685 CCDC170Q8IYT3 715 aa11.37□□□□□ -0.59
TMEM39A-211ENST00000491685 CARNMT1Q8N4J0 409 aa11.37□□□□□ -0.59
TMEM39A-211ENST00000491685 PNPLA1Q8N8W4 532 aa11.37□□□□□ -0.59
TMEM39A-211ENST00000491685 SPC24Q8NBT2 197 aa11.37□□□□□ -0.59
TMEM39A-211ENST00000491685 HJURPQ8NCD3 748 aaPredicted RBP11.37□□□□□ -0.59
TMEM39A-211ENST00000491685 SLC30A5Q8TAD4 765 aa11.37□□□□□ -0.59
TMEM39A-211ENST00000491685 PCDHB18PQ96TA0 734 aa11.37□□□□□ -0.59
TMEM39A-211ENST00000491685 ORAI3Q9BRQ5 295 aa11.37□□□□□ -0.59
TMEM39A-211ENST00000491685 GAREM1Q9H706 876 aa11.37□□□□□ -0.59
TMEM39A-211ENST00000491685 NHEJ1Q9H9Q4 299 aaPredicted RBP11.37□□□□□ -0.59
TMEM39A-211ENST00000491685 FBRSQ9HAH7 460 aa11.37□□□□□ -0.59
TMEM39A-211ENST00000491685 PARVAQ9NVD7 372 aa11.37□□□□□ -0.59
TMEM39A-211ENST00000491685 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.37□□□□□ -0.59
TMEM39A-211ENST00000491685 SERGEFQ9UGK8 458 aa11.37□□□□□ -0.59
TMEM39A-211ENST00000491685 STAP1Q9ULZ2 295 aa11.37□□□□□ -0.59
TMEM39A-211ENST00000491685 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.37□□□□□ -0.59
TMEM39A-211ENST00000491685 MSRB2Q9Y3D2 182 aa11.37□□□□□ -0.59
TMEM39A-211ENST00000491685 PAXBP1Q9Y5B6 917 aa11.37□□□□□ -0.59
TMEM39A-211ENST00000491685 DOCK9Q9BZ29 2069 aa11.37□□□□□ -0.59
TMEM39A-211ENST00000491685 TMCO5BA8MYB1 307 aa11.36□□□□□ -0.59
TMEM39A-211ENST00000491685 IRAK2O43187 625 aa11.36□□□□□ -0.59
TMEM39A-211ENST00000491685 CBFA2T3O75081 653 aa11.36□□□□□ -0.59
TMEM39A-211ENST00000491685 SIN3BO75182 1162 aa11.36□□□□□ -0.59
TMEM39A-211ENST00000491685 SEMA4FO95754 770 aa11.36□□□□□ -0.59
TMEM39A-211ENST00000491685 ERBB2P04626 1255 aa11.36□□□□□ -0.59
TMEM39A-211ENST00000491685 FTH1P19P0C7X4 201 aa11.36□□□□□ -0.59
TMEM39A-211ENST00000491685 SLC2A3P11169 496 aa11.36□□□□□ -0.59
TMEM39A-211ENST00000491685 POLR2EP19388 210 aaKnown RBP11.36□□□□□ -0.59
TMEM39A-211ENST00000491685 EIF4A3P38919 411 aaKnown RBP11.36□□□□□ -0.59
TMEM39A-211ENST00000491685 CSNK1EP49674 416 aaKnown RBP11.36□□□□□ -0.59
TMEM39A-211ENST00000491685 SFSWAPQ12872 951 aaKnown RBP11.36□□□□□ -0.59
TMEM39A-211ENST00000491685 TAF5Q15542 800 aa11.36□□□□□ -0.59
TMEM39A-211ENST00000491685 TRIP6Q15654 476 aaKnown RBP11.36□□□□□ -0.59
TMEM39A-211ENST00000491685 HLA-BQ31612 363 aa11.36□□□□□ -0.59
TMEM39A-211ENST00000491685 DCAF6Q58WW2 860 aa11.36□□□□□ -0.59
TMEM39A-211ENST00000491685 KCNT1Q5JUK3 1230 aa11.36□□□□□ -0.59
TMEM39A-211ENST00000491685 MPP7Q5T2T1 576 aa11.36□□□□□ -0.59
TMEM39A-211ENST00000491685 RAP1GAP2Q684P5 730 aa11.36□□□□□ -0.59
TMEM39A-211ENST00000491685 HGSNATQ68CP4 663 aa11.36□□□□□ -0.59
TMEM39A-211ENST00000491685 DCUN1D2Q6PH85 259 aa11.36□□□□□ -0.59
TMEM39A-211ENST00000491685 ARCQ7LC44 396 aa11.36□□□□□ -0.59
TMEM39A-211ENST00000491685 RAB44Q7Z6P3 723 aaPredicted RBP11.36□□□□□ -0.59
TMEM39A-211ENST00000491685 CIR1Q86X95 450 aaPredicted RBP11.36□□□□□ -0.59
TMEM39A-211ENST00000491685 MCOLN2Q8IZK6 566 aa11.36□□□□□ -0.59
TMEM39A-211ENST00000491685 TXLNBQ8N3L3 684 aa11.36□□□□□ -0.59
TMEM39A-211ENST00000491685 FIBINQ8TAL6 211 aa11.36□□□□□ -0.59
TMEM39A-211ENST00000491685 RNF34Q969K3 372 aa11.36□□□□□ -0.59
TMEM39A-211ENST00000491685 BIRC7Q96CA5 298 aa11.36□□□□□ -0.59
TMEM39A-211ENST00000491685 SERPINB11Q96P15 392 aa11.36□□□□□ -0.59
TMEM39A-211ENST00000491685 NCAPGQ9BPX3 1015 aa11.36□□□□□ -0.59
TMEM39A-211ENST00000491685 ZDHHC5Q9C0B5 715 aa11.36□□□□□ -0.59
TMEM39A-211ENST00000491685 PCOLCE2Q9UKZ9 415 aa11.36□□□□□ -0.59
TMEM39A-211ENST00000491685 PLA2G4CQ9UP65 541 aa11.36□□□□□ -0.59
TMEM39A-211ENST00000491685 TLR6Q9Y2C9 796 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms