RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 CACNA1HO95180 2353 aa16.69■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 A0A0D9SEW6 157 aa16.69■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 PRR23AA6NEV1 266 aa16.69■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 FGF10O15520 208 aaPredicted RBP16.69■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 TCF4P15884 667 aa16.69■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 IL1R2P27930 398 aa16.69■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 ETFBP38117 255 aa16.69■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 NNMTP40261 264 aa16.69■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 VASPP50552 380 aaPredicted RBP16.69■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 COPAP53621 1224 aa16.69■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 GNA12Q03113 381 aa16.69■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 HNRNPA1L2Q32P51 320 aaKnown RBP16.69■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 KIAA1324Q6UXG2 1013 aaKnown RBP16.69■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 PRR23BQ6ZRT6 265 aa16.69■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 TMTC1Q8IUR5 882 aa16.69■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 RTL3Q8N8U3 475 aaKnown RBP16.69■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 SUMF1Q8NBK3 374 aa16.69■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 OR7D4Q8NG98 312 aa16.69■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 OR2T3Q8NH03 318 aa16.69■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 RFFLQ8WZ73 363 aa16.69■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 SPACA7Q96KW9 195 aa16.69■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 SLC6A17Q9H1V8 727 aa16.69■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 ZWILCHQ9H900 591 aa16.69■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 FBRSQ9HAH7 460 aa16.69■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 OSGEPQ9NPF4 335 aa16.69■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 NDFIP2Q9NV92 336 aa16.69■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 DNAI1Q9UI46 699 aa16.69■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 VPS51Q9UID3 782 aa16.69■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 SLCO3A1Q9UIG8 710 aa16.69■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 RAB23Q9ULC3 237 aa16.69■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 EML5Q05BV3 1969 aa16.69■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 EDDM13A0A1B0GTR0 161 aa16.68■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 SOWAHDA6NJG2 315 aa16.68■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 WASH4PA8MWX3 477 aa16.68■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 TTC34A8MYJ7 566 aa16.68■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 GOLGA6L6A8MZA4 724 aa16.68■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 EEF2KO00418 725 aaKnown RBP16.68■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 SNAP91O60641 907 aa16.68■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 PROSCO94903 275 aa16.68■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 LCA5LO95447 670 aa16.68■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 P2RY2P41231 377 aa16.68■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 MAGEA1P43355 309 aa16.68■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 ZNF135P52742 658 aaPredicted RBP16.68■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 SLC25A11Q02978 314 aaKnown RBP16.68■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 BYSLQ13895 437 aaKnown RBP16.68■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 SPA17Q15506 151 aa16.68■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 SMTNL2Q2TAL5 461 aa16.68■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 BOLA3Q53S33 107 aa16.68■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 ASCL5Q7RTU5 278 aa16.68■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 SLC35G2Q8TBE7 412 aa16.68■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 TEKT4Q8WW24 435 aa16.68■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 HSPH1Q92598 858 aa16.68■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 SPON2Q9BUD6 331 aa16.68■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 MKRN2Q9H000 416 aaKnown RBP16.68■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 MTG2Q9H4K7 406 aa16.68■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 PRDM16Q9HAZ2 1276 aa16.68■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 ATP13A1Q9HD20 1204 aa16.68■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 PRSS16Q9NQE7 514 aa16.68■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 INVSQ9Y283 1065 aa16.68■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 TARSL2A2RTX5 802 aaKnown RBP16.67■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 DCLK1O15075 740 aa16.67■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 ATP9BO43861 1147 aa16.67■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 RAMP2O60895 175 aa16.67■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 SIN3BO75182 1162 aa16.67■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 MTA2O94776 668 aa16.67■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 GLDCP23378 1020 aa16.67■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 MAN1A1P33908 653 aa16.67■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 SSR1P43307 286 aaKnown RBP16.67■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 DPYSL2Q16555 572 aa16.67■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 LPAL2Q16609 132 aa16.67■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 HADHQ16836 314 aaKnown RBP16.67■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 PPP6R3Q5H9R7 873 aaPredicted RBP16.67■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 KCNT1Q5JUK3 1230 aa16.67■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 IL31Q6EBC2 164 aa16.67■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 C11orf74Q86VG3 221 aa16.67■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 TMPRSS6Q8IU80 811 aa16.67■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 SH2D3CQ8N5H7 860 aa16.67■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 RLN3Q8WXF3 142 aa16.67■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 PRCCQ92733 491 aaPredicted RBP16.67■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 SIPA1Q96FS4 1042 aa16.67■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 MAGEH1Q9H213 219 aa16.67■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 LUC7LQ9NQ29 371 aaKnown RBP16.67■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.67■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 DONSONQ9NYP3 566 aa16.67■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 HS3ST2Q9Y278 367 aa16.67■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 TMEM110-MUSTN1A8MSY1 372 aa16.66■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 CBX4O00257 560 aa16.66■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 DAPK3O43293 454 aa16.66■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 ZNF217O75362 1048 aa16.66■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 NDUFA10O95299 355 aa16.66■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 IPO7O95373 1038 aaKnown RBP16.66■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 RARAP10276 462 aa16.66■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 GOT1P17174 413 aa16.66■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 ACVRL1P37023 503 aa16.66■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 ARHGAP25P42331 645 aa16.66■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 MRE11P49959 708 aa16.66■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 MESDQ14696 234 aa16.66■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 POLD3Q15054 466 aaPredicted RBP16.66■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 TCEAL1Q15170 157 aa16.66■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 MAP7D1Q3KQU3 841 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms